FFCP PHASE1:Mm9::chr15:76490279..76490333,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=16581|HGNC=|MCL_coexpression_id=1|UniProt=Q3UNC4|association_with_transcript=-5bp_to_uc007wlk.1_5end|description=CAGE_peak_3_at_Kifc2_5end|id=chr15:76490279..76490333,+|ontology_enrichment_celltype=CL:0000117!2.92e-09!23;CL:0000337!2.92e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,2.10e-10,23;CL:0000337,2.10e-10,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!9.98e-19!52;UBERON:0005068!9.98e-19!52;UBERON:0006241!9.98e-19!52;UBERON:0007135!9.98e-19!52;UBERON:0000955!1.48e-18!50;UBERON:0006238!1.48e-18!50;UBERON:0002616!6.92e-18!49;UBERON:0000033!3.50e-17!63;UBERON:0002346!6.26e-15!71;UBERON:0003075!6.26e-15!71;UBERON:0007284!6.26e-15!71;UBERON:0001017!1.89e-14!73;UBERON:0005743!1.89e-14!73;UBERON:0003080!2.12e-13!40;UBERON:0000073!3.49e-13!75;UBERON:0001016!3.49e-13!75;UBERON:0003056!4.91e-13!49;UBERON:0002020!7.30e-13!34;UBERON:0002780!9.54e-13!39;UBERON:0001890!9.54e-13!39;UBERON:0006240!9.54e-13!39;UBERON:0004111!3.61e-11!122;UBERON:0000025!5.09e-11!114;UBERON:0004121!5.74e-11!102;UBERON:0000924!5.74e-11!102;UBERON:0006601!5.74e-11!102;UBERON:0002791!8.12e-11!29;UBERON:0003528!8.12e-11!29;UBERON:0001893!8.12e-11!29;UBERON:0007811!8.40e-11!86;UBERON:0000153!3.62e-09!94;UBERON:0000477!6.24e-07!154;UBERON:0000483!7.40e-07!181;UBERON:0000956!9.20e-07!21;UBERON:0001869!9.20e-07!21;UBERON:0000203!9.20e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.50e-22,54;UBERON:0001049,7.17e-21,52;UBERON:0005068,7.17e-21,52;UBERON:0006241,7.17e-21,52;UBERON:0007135,7.17e-21,52;UBERON:0000955,2.71e-18,47;UBERON:0006238,2.71e-18,47;UBERON:0002346,3.38e-18,64;UBERON:0003075,3.38e-18,64;UBERON:0007284,3.38e-18,64;UBERON:0002616,1.60e-17,46;UBERON:0001017,4.30e-17,73;UBERON:0001016,5.13e-16,75;UBERON:0010314,1.03e-15,92;UBERON:0003080,6.89e-15,40;UBERON:0002020,2.03e-14,34;UBERON:0003056,2.69e-14,49;UBERON:0010371,4.02e-14,73;UBERON:0002780,4.11e-14,39;UBERON:0001890,4.11e-14,39;UBERON:0006240,4.11e-14,39;UBERON:0004121,6.68e-13,95;UBERON:0000924,6.68e-13,95;UBERON:0006601,6.68e-13,95;UBERON:0003528,5.80e-12,29;UBERON:0002791,5.80e-12,29;UBERON:0001893,5.80e-12,29;UBERON:0004111,2.87e-10,122;UBERON:0000025,3.48e-10,114;UBERON:0002021,1.35e-07,10;UBERON:0000411,1.35e-07,10;UBERON:0001950,1.35e-07,10;UBERON:0000956,3.68e-07,21;UBERON:0001869,3.68e-07,21;UBERON:0000203,3.68e-07,21;UBERON:0000483,7.82e-07,174;UBERON:0003076,9.00e-07,12;UBERON:0003057,9.00e-07,12|phase1_expression=0.640595388419176,2.44282785347553,1.36499771816861,5.14189159221611,5.50985302940982,0.839396359559449,0.700837921786577,1.54947988129892,0.281577444303333,0.234064526321993,0,0,1.71200729931206,1.13646523144697,0,0.404950534779652,0,0.473193248037357,0.274228867211478,1.27316895539409,2.12608225377674,0.0992909512008853,0.261199789138935,0.799962113967033,2.52350209173887,1.14846392823004,1.7230479846363,0.861884930743556,1.71021077510736,1.26015064879965,0.665191531965914,0,0,0,0,0,0.204169356262369,0,0,0.523523743973798,0.588231488031014,0.683045484958446,0,0.755380907853464,0.912392380975631,0.734187008646726,0.782391344348039,1.96222640742402,0.659058548203415,0.58328969722285,0.139986421625363,1.43752564364972,0.838913030288682,0,0.336093799142464,0,0.85960031981627,1.03134418455488,3.84401275633236,1.5869729378161,2.53532561402472,0,0,0.449949858640699,0.988866362566974,0,0.898800331555214,0.384218305321555,1.03689612308478,1.08004750665353,1.05162480675691,2.85650984403804,3.09215957332259,0.857435594504678,1.24599112323707,2.75765635983006,4.40463523997555,9.19348834213351,7.83393319606842,2.2420668914133,2.37867873366265,2.08365348222704,5.862842979029,6.75315132038016,10.0846843532695,2.65165726926301,1.42371680799103,1.86399445825301,0,0.302286240427142,1.44932244350839,0.860423876981386,0.679971333707751,1.07940638327563,1.94932925234301,0,0.842666520790511,0.340860645156116,0.259786004602869,0,1.69012103732017,0,0,0,0,0,0,0.91347103775248,0.258937883647172,2.52351636410202,0.173485326766136,0,1.15307748628029,1.3565037649736,1.05829836422134,0.879666139307728,0.988779870937496,1.44599356919912,0.884610551949874,0.485300549842228,1.76673214768315,0.484875253135222,1.86391761218122,5.85561594023094,5.23616767033638,0.766371165625774,0.11981512450592,0,0,8.98743836428936,4.11750542536764,2.89005009859588,6.95297280769106,5.11430914660661,6.64921742590592,7.94982189032012,0.509196819251581,0.497627882440372,0.252722758433675,1.47309299120532,0.650602214813519,0.229902104433473,0.720248519221397,1.35634336052144,1.2246569847239,1.40925092313335,1.21812241927647,2.58703370739016,0.431135985865684,0.567318240503458,1.05570674498369,1.31517439456545,0.278047249225598,0.696504333044333,0.411564272815887,1.19420560091096,0,0,0,1.24275463521301,0.469052119962192,0.36012412292203,1.89395788468168,0.787056926989615,0.617068451549513,0.930135779001631,1.3413670069981,0.817357396570186,1.48103864922132,2.29834449710733,1.62137619091711,2.48539978623065,0.878200461164203,1.34206418760372,6.30869845692382,2.26390147234426,2.31293148088659,0.793351699990633,1.06644125267617,0.232236671860439,0.77320476793256,0.605050573870028,0.667134131534611,0.760902504450237,0.949058123089023,0.164698954724011,1.50801125280162,1.1937388322469,0.38992817423824,1.79763881730844,0.648414149624083,0.995706366271836,0.379335801906163,0.913988100877831,2.25415471346161,0.610953983535943,0.193952487167626,0.771494018793504,1.58091342810643,0.885660887877613,1.8839847340965,1.97435462274881,1.1858105083486,0,0,0,0,0.241177159752417,0.763877555344259,0.575392274901621,0.648540907100142,1.09824565275233,0,0.744281895337007,0.936113019343682,1.01031551178845,1.25578189465339,2.41221760681684,0.369506380333209,0.568474235311454,0.651859905768103,0.339490171550376,0.704070744865506,1.00503754465089,1.19021820443007,2.14647012643579,0.630540576424764,0.664394068946325,2.39182152986231,1.47476983244164,1.72684981865896,2.60368305446721,1.50791283939272,0,0,0.551873492609465,6.58257418949947,5.62616095642575,0,1.51482556322624,0,0,0.430846795465598,0.238968797952552,0.445597348164788,0.283076530788832,0,0.876767573733936,0,6.42642632843614,0.709700426041343,1.06839362200353,0.488660878060728,0.824850614862677,1.32745138339963,0,0.604647113929502,0.377210159511796,0.295301892880773,0.307435147943927,0.516856586336442,1.09060118843252,0.712994756769443,1.58018378967908,1.05418608574999,0,1.70219802876894,0.18006109403131,1.4229455216103,0.857348140126369,1.95074257006501,1.42695054081656,1.64549020602121,2.74018454203139,0,1.90648863777438,1.98475558249466,0.32977250588296,0.968786560175433,0.542816324353403,0.716234064018819,0.656563598980245,1.1659233465194,4.63563255026274,0.341741761595705,0.619160603889667,0,0.188368457004691,0.136694227721025,1.14389086603261,0.169978429993855,0,0.138199973804424,0,0.632671987162271,1.01659733563424,1.18805874903981,0.418176592028937,0.655087691238533,0.674321731924103,0.743881101528023,1.04702376793612,1.55537967950151,0,0,1.19613236835183,0.66183396182839,0.972255941720238,0.387479470433193,1.85851738039856,0.938857909166032,1.17183946359555,0.838874755405687,1.20792060413003,0.576060012515731,0.632022241256357,0,0.513554785824136,0.25984164595559,0.537080087002444,0.993406773906324,0.721172697119813,1.62458479892035,2.01932899896295,1.143102099825,1.41156659191577,0.779663045918019,0.962118416403295,1.05189211963412,1.36038230169127,0,0.179427713218951,0.839423081820392,1.9318959403219,0.93841237725591,1.28206136987086,0.857473516316263,0.501572104035363,6.21227026878773,1.84130094602871,4.58316410751517,4.81188910562325,2.05524755931193,3.0215755895588,3.37511250115903,4.95353323546643,3.62513927187364,3.62432218226274,0,0.399024873401031,0.853668028770671,0.729320151204882,0.209613162627982,0,0,0.824140228955577,1.28367683836726,1.26348605881899,1.2673964994512,0,0.936415074698824,1.02440243847791,1.49332219284595,0.476293691283074,1.62238056322798,1.15745532278223,1.23625770240992,1.03039244094078,0.342869252385415,1.06485483695602,1.1921809497366,1.59881058295561,0.941093804153306,1.01537529470012,0.73171189149109,1.05227884575137,1.35804113845862,0,1.06771516311757,0.788035859004508,0.818462086339379,1.70430525304563,1.15743966588685,1.24905288968973,1.16965804222704,1.93383948643468,1.3390183244819,0.661774257358546,1.15933917810211|short_description=p3@Kifc2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:16581 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3UNC4 | |||
|association_with_transcript=-5bp_to_uc007wlk.1_5end | |||
|cluster_id=chr15:76490279..76490333,+ | |||
|description=CAGE_peak_3_at_Kifc2_5end | |||
|id=chr15:76490279..76490333,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.92e-09!23;CL:0000337!2.92e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.10e-10,23;CL:0000337,2.10e-10,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.98e-19!52;UBERON:0005068!9.98e-19!52;UBERON:0006241!9.98e-19!52;UBERON:0007135!9.98e-19!52;UBERON:0000955!1.48e-18!50;UBERON:0006238!1.48e-18!50;UBERON:0002616!6.92e-18!49;UBERON:0000033!3.50e-17!63;UBERON:0002346!6.26e-15!71;UBERON:0003075!6.26e-15!71;UBERON:0007284!6.26e-15!71;UBERON:0001017!1.89e-14!73;UBERON:0005743!1.89e-14!73;UBERON:0003080!2.12e-13!40;UBERON:0000073!3.49e-13!75;UBERON:0001016!3.49e-13!75;UBERON:0003056!4.91e-13!49;UBERON:0002020!7.30e-13!34;UBERON:0002780!9.54e-13!39;UBERON:0001890!9.54e-13!39;UBERON:0006240!9.54e-13!39;UBERON:0004111!3.61e-11!122;UBERON:0000025!5.09e-11!114;UBERON:0004121!5.74e-11!102;UBERON:0000924!5.74e-11!102;UBERON:0006601!5.74e-11!102;UBERON:0002791!8.12e-11!29;UBERON:0003528!8.12e-11!29;UBERON:0001893!8.12e-11!29;UBERON:0007811!8.40e-11!86;UBERON:0000153!3.62e-09!94;UBERON:0000477!6.24e-07!154;UBERON:0000483!7.40e-07!181;UBERON:0000956!9.20e-07!21;UBERON:0001869!9.20e-07!21;UBERON:0000203!9.20e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.50e-22,54;UBERON:0001049,7.17e-21,52;UBERON:0005068,7.17e-21,52;UBERON:0006241,7.17e-21,52;UBERON:0007135,7.17e-21,52;UBERON:0000955,2.71e-18,47;UBERON:0006238,2.71e-18,47;UBERON:0002346,3.38e-18,64;UBERON:0003075,3.38e-18,64;UBERON:0007284,3.38e-18,64;UBERON:0002616,1.60e-17,46;UBERON:0001017,4.30e-17,73;UBERON:0001016,5.13e-16,75;UBERON:0010314,1.03e-15,92;UBERON:0003080,6.89e-15,40;UBERON:0002020,2.03e-14,34;UBERON:0003056,2.69e-14,49;UBERON:0010371,4.02e-14,73;UBERON:0002780,4.11e-14,39;UBERON:0001890,4.11e-14,39;UBERON:0006240,4.11e-14,39;UBERON:0004121,6.68e-13,95;UBERON:0000924,6.68e-13,95;UBERON:0006601,6.68e-13,95;UBERON:0003528,5.80e-12,29;UBERON:0002791,5.80e-12,29;UBERON:0001893,5.80e-12,29;UBERON:0004111,2.87e-10,122;UBERON:0000025,3.48e-10,114;UBERON:0002021,1.35e-07,10;UBERON:0000411,1.35e-07,10;UBERON:0001950,1.35e-07,10;UBERON:0000956,3.68e-07,21;UBERON:0001869,3.68e-07,21;UBERON:0000203,3.68e-07,21;UBERON:0000483,7.82e-07,174;UBERON:0003076,9.00e-07,12;UBERON:0003057,9.00e-07,12 | |||
|phase1_expression=0.640595388419176,2.44282785347553,1.36499771816861,5.14189159221611,5.50985302940982,0.839396359559449,0.700837921786577,1.54947988129892,0.281577444303333,0.234064526321993,0,0,1.71200729931206,1.13646523144697,0,0.404950534779652,0,0.473193248037357,0.274228867211478,1.27316895539409,2.12608225377674,0.0992909512008853,0.261199789138935,0.799962113967033,2.52350209173887,1.14846392823004,1.7230479846363,0.861884930743556,1.71021077510736,1.26015064879965,0.665191531965914,0,0,0,0,0,0.204169356262369,0,0,0.523523743973798,0.588231488031014,0.683045484958446,0,0.755380907853464,0.912392380975631,0.734187008646726,0.782391344348039,1.96222640742402,0.659058548203415,0.58328969722285,0.139986421625363,1.43752564364972,0.838913030288682,0,0.336093799142464,0,0.85960031981627,1.03134418455488,3.84401275633236,1.5869729378161,2.53532561402472,0,0,0.449949858640699,0.988866362566974,0,0.898800331555214,0.384218305321555,1.03689612308478,1.08004750665353,1.05162480675691,2.85650984403804,3.09215957332259,0.857435594504678,1.24599112323707,2.75765635983006,4.40463523997555,9.19348834213351,7.83393319606842,2.2420668914133,2.37867873366265,2.08365348222704,5.862842979029,6.75315132038016,10.0846843532695,2.65165726926301,1.42371680799103,1.86399445825301,0,0.302286240427142,1.44932244350839,0.860423876981386,0.679971333707751,1.07940638327563,1.94932925234301,0,0.842666520790511,0.340860645156116,0.259786004602869,0,1.69012103732017,0,0,0,0,0,0,0.91347103775248,0.258937883647172,2.52351636410202,0.173485326766136,0,1.15307748628029,1.3565037649736,1.05829836422134,0.879666139307728,0.988779870937496,1.44599356919912,0.884610551949874,0.485300549842228,1.76673214768315,0.484875253135222,1.86391761218122,5.85561594023094,5.23616767033638,0.766371165625774,0.11981512450592,0,0,8.98743836428936,4.11750542536764,2.89005009859588,6.95297280769106,5.11430914660661,6.64921742590592,7.94982189032012,0.509196819251581,0.497627882440372,0.252722758433675,1.47309299120532,0.650602214813519,0.229902104433473,0.720248519221397,1.35634336052144,1.2246569847239,1.40925092313335,1.21812241927647,2.58703370739016,0.431135985865684,0.567318240503458,1.05570674498369,1.31517439456545,0.278047249225598,0.696504333044333,0.411564272815887,1.19420560091096,0,0,0,1.24275463521301,0.469052119962192,0.36012412292203,1.89395788468168,0.787056926989615,0.617068451549513,0.930135779001631,1.3413670069981,0.817357396570186,1.48103864922132,2.29834449710733,1.62137619091711,2.48539978623065,0.878200461164203,1.34206418760372,6.30869845692382,2.26390147234426,2.31293148088659,0.793351699990633,1.06644125267617,0.232236671860439,0.77320476793256,0.605050573870028,0.667134131534611,0.760902504450237,0.949058123089023,0.164698954724011,1.50801125280162,1.1937388322469,0.38992817423824,1.79763881730844,0.648414149624083,0.995706366271836,0.379335801906163,0.913988100877831,2.25415471346161,0.610953983535943,0.193952487167626,0.771494018793504,1.58091342810643,0.885660887877613,1.8839847340965,1.97435462274881,1.1858105083486,0,0,0,0,0.241177159752417,0.763877555344259,0.575392274901621,0.648540907100142,1.09824565275233,0,0.744281895337007,0.936113019343682,1.01031551178845,1.25578189465339,2.41221760681684,0.369506380333209,0.568474235311454,0.651859905768103,0.339490171550376,0.704070744865506,1.00503754465089,1.19021820443007,2.14647012643579,0.630540576424764,0.664394068946325,2.39182152986231,1.47476983244164,1.72684981865896,2.60368305446721,1.50791283939272,0,0,0.551873492609465,6.58257418949947,5.62616095642575,0,1.51482556322624,0,0,0.430846795465598,0.238968797952552,0.445597348164788,0.283076530788832,0,0.876767573733936,0,6.42642632843614,0.709700426041343,1.06839362200353,0.488660878060728,0.824850614862677,1.32745138339963,0,0.604647113929502,0.377210159511796,0.295301892880773,0.307435147943927,0.516856586336442,1.09060118843252,0.712994756769443,1.58018378967908,1.05418608574999,0,1.70219802876894,0.18006109403131,1.4229455216103,0.857348140126369,1.95074257006501,1.42695054081656,1.64549020602121,2.74018454203139,0,1.90648863777438,1.98475558249466,0.32977250588296,0.968786560175433,0.542816324353403,0.716234064018819,0.656563598980245,1.1659233465194,4.63563255026274,0.341741761595705,0.619160603889667,0,0.188368457004691,0.136694227721025,1.14389086603261,0.169978429993855,0,0.138199973804424,0,0.632671987162271,1.01659733563424,1.18805874903981,0.418176592028937,0.655087691238533,0.674321731924103,0.743881101528023,1.04702376793612,1.55537967950151,0,0,1.19613236835183,0.66183396182839,0.972255941720238,0.387479470433193,1.85851738039856,0.938857909166032,1.17183946359555,0.838874755405687,1.20792060413003,0.576060012515731,0.632022241256357,0,0.513554785824136,0.25984164595559,0.537080087002444,0.993406773906324,0.721172697119813,1.62458479892035,2.01932899896295,1.143102099825,1.41156659191577,0.779663045918019,0.962118416403295,1.05189211963412,1.36038230169127,0,0.179427713218951,0.839423081820392,1.9318959403219,0.93841237725591,1.28206136987086,0.857473516316263,0.501572104035363,6.21227026878773,1.84130094602871,4.58316410751517,4.81188910562325,2.05524755931193,3.0215755895588,3.37511250115903,4.95353323546643,3.62513927187364,3.62432218226274,0,0.399024873401031,0.853668028770671,0.729320151204882,0.209613162627982,0,0,0.824140228955577,1.28367683836726,1.26348605881899,1.2673964994512,0,0.936415074698824,1.02440243847791,1.49332219284595,0.476293691283074,1.62238056322798,1.15745532278223,1.23625770240992,1.03039244094078,0.342869252385415,1.06485483695602,1.1921809497366,1.59881058295561,0.941093804153306,1.01537529470012,0.73171189149109,1.05227884575137,1.35804113845862,0,1.06771516311757,0.788035859004508,0.818462086339379,1.70430525304563,1.15743966588685,1.24905288968973,1.16965804222704,1.93383948643468,1.3390183244819,0.661774257358546,1.15933917810211 | |||
|short_description=p3@Kifc2 | |||
}} |
Revision as of 13:07, 5 August 2015
Short description: | p3@Kifc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Kifc2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -5bp_to_uc007wlk.1_5end |
EntrezGene: | 16581 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.10e-10 | 23 |
neuroblast (sensu Vertebrata) | 2.10e-10 | 23 |