FFCP PHASE1:Mm9::chr4:42962733..42962795,+: Difference between revisions
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{{FFCP|EntrezGene=56323|HGNC=|MCL_coexpression_id=13|UniProt=O89114,Q3TY13|association_with_transcript=0bp_to_ENSMUST00000098112,ENSMUST00000123501,uc008som.1_5end|description=CAGE_peak_1_at_Dnajb5_5end|id=chr4:42962733..42962795,+|ontology_enrichment_celltype=CL:0002319!3.54e-12!43;CL:0000117!4.48e-12!23;CL:0000337!4.48e-12!23;CL:0000221!7.74e-12!44;CL:0000133!7.74e-12!44;CL:0000540!6.22e-11!33;CL:0000047!6.22e-11!33;CL:0000031!6.22e-11!33;CL:0000404!6.22e-11!33;CL:0000055!1.89e-09!50;CL:0000393!3.85e-08!39;CL:0000211!3.85e-08!39|ontology_enrichment_celltype_v019_2=CL:0002319,3.54e-12,43;CL:0000117,4.48e-12,23;CL:0000337,4.48e-12,23;CL:0000221,7.74e-12,44;CL:0000133,7.74e-12,44;CL:0000540,6.22e-11,33;CL:0000047,6.22e-11,33;CL:0000031,6.22e-11,33;CL:0000404,6.22e-11,33;CL:0000393,3.85e-08,39;CL:0000211,3.85e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.57e-28!73;UBERON:0005743!5.57e-28!73;UBERON:0000073!1.20e-26!75;UBERON:0001016!1.20e-26!75;UBERON:0001049!9.59e-24!52;UBERON:0005068!9.59e-24!52;UBERON:0006241!9.59e-24!52;UBERON:0007135!9.59e-24!52;UBERON:0000955!4.68e-23!50;UBERON:0006238!4.68e-23!50;UBERON:0002616!2.71e-22!49;UBERON:0000033!9.53e-21!63;UBERON:0004121!1.50e-20!102;UBERON:0000924!1.50e-20!102;UBERON:0006601!1.50e-20!102;UBERON:0002020!5.39e-20!34;UBERON:0002346!1.06e-19!71;UBERON:0003075!1.06e-19!71;UBERON:0007284!1.06e-19!71;UBERON:0003080!2.06e-18!40;UBERON:0002780!6.09e-18!39;UBERON:0001890!6.09e-18!39;UBERON:0006240!6.09e-18!39;UBERON:0002791!8.38e-18!29;UBERON:0003528!8.38e-18!29;UBERON:0001893!8.38e-18!29;UBERON:0003056!6.61e-17!49;UBERON:0000956!1.12e-13!21;UBERON:0001869!1.12e-13!21;UBERON:0000203!1.12e-13!21;UBERON:0000025!3.28e-12!114;UBERON:0004111!6.62e-12!122;UBERON:0007811!1.48e-11!86;UBERON:0002619!2.04e-11!17;UBERON:0000153!1.37e-10!94;UBERON:0002021!5.67e-08!10;UBERON:0000411!5.67e-08!10;UBERON:0001950!5.67e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.57e-28,73;UBERON:0001016,1.20e-26,75;UBERON:0000073,9.84e-25,54;UBERON:0010314,4.04e-24,92;UBERON:0001049,9.59e-24,52;UBERON:0005068,9.59e-24,52;UBERON:0006241,9.59e-24,52;UBERON:0007135,9.59e-24,52;UBERON:0004121,2.88e-22,95;UBERON:0000924,2.88e-22,95;UBERON:0006601,2.88e-22,95;UBERON:0002346,3.62e-22,64;UBERON:0003075,3.62e-22,64;UBERON:0007284,3.62e-22,64;UBERON:0000955,9.42e-22,47;UBERON:0006238,9.42e-22,47;UBERON:0002616,5.34e-21,46;UBERON:0002020,5.39e-20,34;UBERON:0010371,1.08e-18,73;UBERON:0003080,2.06e-18,40;UBERON:0002780,6.09e-18,39;UBERON:0001890,6.09e-18,39;UBERON:0006240,6.09e-18,39;UBERON:0003528,8.38e-18,29;UBERON:0002791,8.38e-18,29;UBERON:0001893,8.38e-18,29;UBERON:0003056,6.61e-17,49;UBERON:0000956,1.12e-13,21;UBERON:0001869,1.12e-13,21;UBERON:0000203,1.12e-13,21;UBERON:0000025,3.28e-12,114;UBERON:0004111,6.62e-12,122;UBERON:0002619,2.04e-11,17;UBERON:0002021,5.67e-08,10;UBERON:0000411,5.67e-08,10;UBERON:0001950,5.67e-08,10|phase1_expression=8.80818659076367,4.18770489167233,1.81999695755814,3.93203474698879,3.00537437967808,4.36486106970913,3.03696432774183,11.3628524628587,23.230139155025,24.8108397901313,8.21846247482424,9.01425396647301,13.0112554747716,13.3753215701066,2.99798785634096,1.82227740650843,1.39912375625629,9.93705820878449,12.4774134581222,6.36584477697045,17.8590909317247,2.18440092641948,2.35079810225042,5.43974237497583,4.81759490241057,2.29692785646008,1.7230479846363,3.878482188346,1.33016393619462,1.26015064879965,2.21730510655305,0.635030673459631,0,0,4.91047753577167,2.49351968037739,3.47087905646027,7.11503772252743,5.4693474116666,2.61761871986899,8.2352408324342,3.41522742479223,6.311634589405,8.43508680436368,7.19776211658553,7.15832333430558,21.9069576417451,36.1921759591541,23.5064215525885,27.6090456685482,15.2585199571645,24.4379359420452,20.8050431511593,11.6057942721815,14.1159395639835,6.68874533693462,6.87680255853016,8.25075347643908,44.9142543108307,41.2612963832186,41.8328726314078,15.2480039431109,11.5608323494448,21.5975932147536,7.9109309005358,19.8934432184908,15.579205746957,24.5899715405795,38.8836046156791,39.5567399311854,37.437843120546,29.9933533623994,21.2033799313549,38.3396201542806,42.4595436610787,35.8495326777908,24.2254938198655,32.0495218593821,22.2729473221553,49.7211304742831,49.6777904761084,43.2358097562111,22.0554569211091,23.6360296213306,26.2812986176113,27.6950870345248,26.338760947834,45.295065335548,4.39211921332468,9.52201657345497,19.4209207430124,10.3250865237766,5.439770669662,5.39703191637817,5.19821133958135,4.48026887097336,15.4488862144927,3.2381761289831,1.81850203222008,1.41335829804136,8.87313544593087,10.2661181931454,7.64415719119937,14.2213340630666,6.49473123033642,8.86759529162845,7.58286667522175,8.5637909789295,10.0985774622397,13.8051189330287,9.88866362566974,5.78484408793068,8.07154240396205,8.13902258984162,9.52468527799209,10.3046604890334,2.47194967734374,17.7857209011491,14.153768831198,18.6031877439521,17.2256384399107,10.182380315839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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:56323 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O89114,uniprot:Q3TY13 | |||
|association_with_transcript=0bp_to_ENSMUST00000098112,ENSMUST00000123501,uc008som.1_5end | |||
|cluster_id=chr4:42962733..42962795,+ | |||
|description=CAGE_peak_1_at_Dnajb5_5end | |||
|id=chr4:42962733..42962795,+ | |||
|ontology_enrichment_celltype=CL:0002319!3.54e-12!43;CL:0000117!4.48e-12!23;CL:0000337!4.48e-12!23;CL:0000221!7.74e-12!44;CL:0000133!7.74e-12!44;CL:0000540!6.22e-11!33;CL:0000047!6.22e-11!33;CL:0000031!6.22e-11!33;CL:0000404!6.22e-11!33;CL:0000055!1.89e-09!50;CL:0000393!3.85e-08!39;CL:0000211!3.85e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.54e-12,43;CL:0000117,4.48e-12,23;CL:0000337,4.48e-12,23;CL:0000221,7.74e-12,44;CL:0000133,7.74e-12,44;CL:0000540,6.22e-11,33;CL:0000047,6.22e-11,33;CL:0000031,6.22e-11,33;CL:0000404,6.22e-11,33;CL:0000393,3.85e-08,39;CL:0000211,3.85e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.57e-28!73;UBERON:0005743!5.57e-28!73;UBERON:0000073!1.20e-26!75;UBERON:0001016!1.20e-26!75;UBERON:0001049!9.59e-24!52;UBERON:0005068!9.59e-24!52;UBERON:0006241!9.59e-24!52;UBERON:0007135!9.59e-24!52;UBERON:0000955!4.68e-23!50;UBERON:0006238!4.68e-23!50;UBERON:0002616!2.71e-22!49;UBERON:0000033!9.53e-21!63;UBERON:0004121!1.50e-20!102;UBERON:0000924!1.50e-20!102;UBERON:0006601!1.50e-20!102;UBERON:0002020!5.39e-20!34;UBERON:0002346!1.06e-19!71;UBERON:0003075!1.06e-19!71;UBERON:0007284!1.06e-19!71;UBERON:0003080!2.06e-18!40;UBERON:0002780!6.09e-18!39;UBERON:0001890!6.09e-18!39;UBERON:0006240!6.09e-18!39;UBERON:0002791!8.38e-18!29;UBERON:0003528!8.38e-18!29;UBERON:0001893!8.38e-18!29;UBERON:0003056!6.61e-17!49;UBERON:0000956!1.12e-13!21;UBERON:0001869!1.12e-13!21;UBERON:0000203!1.12e-13!21;UBERON:0000025!3.28e-12!114;UBERON:0004111!6.62e-12!122;UBERON:0007811!1.48e-11!86;UBERON:0002619!2.04e-11!17;UBERON:0000153!1.37e-10!94;UBERON:0002021!5.67e-08!10;UBERON:0000411!5.67e-08!10;UBERON:0001950!5.67e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.57e-28,73;UBERON:0001016,1.20e-26,75;UBERON:0000073,9.84e-25,54;UBERON:0010314,4.04e-24,92;UBERON:0001049,9.59e-24,52;UBERON:0005068,9.59e-24,52;UBERON:0006241,9.59e-24,52;UBERON:0007135,9.59e-24,52;UBERON:0004121,2.88e-22,95;UBERON:0000924,2.88e-22,95;UBERON:0006601,2.88e-22,95;UBERON:0002346,3.62e-22,64;UBERON:0003075,3.62e-22,64;UBERON:0007284,3.62e-22,64;UBERON:0000955,9.42e-22,47;UBERON:0006238,9.42e-22,47;UBERON:0002616,5.34e-21,46;UBERON:0002020,5.39e-20,34;UBERON:0010371,1.08e-18,73;UBERON:0003080,2.06e-18,40;UBERON:0002780,6.09e-18,39;UBERON:0001890,6.09e-18,39;UBERON:0006240,6.09e-18,39;UBERON:0003528,8.38e-18,29;UBERON:0002791,8.38e-18,29;UBERON:0001893,8.38e-18,29;UBERON:0003056,6.61e-17,49;UBERON:0000956,1.12e-13,21;UBERON:0001869,1.12e-13,21;UBERON:0000203,1.12e-13,21;UBERON:0000025,3.28e-12,114;UBERON:0004111,6.62e-12,122;UBERON:0002619,2.04e-11,17;UBERON:0002021,5.67e-08,10;UBERON:0000411,5.67e-08,10;UBERON:0001950,5.67e-08,10 | |||
|phase1_expression=8.80818659076367,4.18770489167233,1.81999695755814,3.93203474698879,3.00537437967808,4.36486106970913,3.03696432774183,11.3628524628587,23.230139155025,24.8108397901313,8.21846247482424,9.01425396647301,13.0112554747716,13.3753215701066,2.99798785634096,1.82227740650843,1.39912375625629,9.93705820878449,12.4774134581222,6.36584477697045,17.8590909317247,2.18440092641948,2.35079810225042,5.43974237497583,4.81759490241057,2.29692785646008,1.7230479846363,3.878482188346,1.33016393619462,1.26015064879965,2.21730510655305,0.635030673459631,0,0,4.91047753577167,2.49351968037739,3.47087905646027,7.11503772252743,5.4693474116666,2.61761871986899,8.2352408324342,3.41522742479223,6.311634589405,8.43508680436368,7.19776211658553,7.15832333430558,21.9069576417451,36.1921759591541,23.5064215525885,27.6090456685482,15.2585199571645,24.4379359420452,20.8050431511593,11.6057942721815,14.1159395639835,6.68874533693462,6.87680255853016,8.25075347643908,44.9142543108307,41.2612963832186,41.8328726314078,15.2480039431109,11.5608323494448,21.5975932147536,7.9109309005358,19.8934432184908,15.579205746957,24.5899715405795,38.8836046156791,39.5567399311854,37.437843120546,29.9933533623994,21.2033799313549,38.3396201542806,42.4595436610787,35.8495326777908,24.2254938198655,32.0495218593821,22.2729473221553,49.7211304742831,49.6777904761084,43.2358097562111,22.0554569211091,23.6360296213306,26.2812986176113,27.6950870345248,26.338760947834,45.295065335548,4.39211921332468,9.52201657345497,19.4209207430124,10.3250865237766,5.439770669662,5.39703191637817,5.19821133958135,4.48026887097336,15.4488862144927,3.2381761289831,1.81850203222008,1.41335829804136,8.87313544593087,10.2661181931454,7.64415719119937,14.2213340630666,6.49473123033642,8.86759529162845,7.58286667522175,8.5637909789295,10.0985774622397,13.8051189330287,9.88866362566974,5.78484408793068,8.07154240396205,8.13902258984162,9.52468527799209,10.3046604890334,2.47194967734374,17.7857209011491,14.153768831198,18.6031877439521,17.2256384399107,10.1823803158397,7.45567044872489,39.2326267995473,37.281513812795,7.15279754584056,3.83408398418945,4.79922184794726,2.92261522268049,29.2091746839404,43.0050566649509,50.2617408451458,67.7914848749878,53.7002460393694,40.9342447782333,34.7196302965001,7.23059483337246,8.9573018839267,7.32895999457657,11.5743020737561,8.32770834961304,9.19608417733892,14.5850325142333,12.2070902446929,14.8319568149895,16.3985561964608,15.8355914505942,15.0047955028629,9.26942369611222,9.8335161687266,11.2608719464927,12.2749610159442,6.11703948296315,12.1888258282758,8.0255033199098,4.37875387000685,4.21327912387941,1.80143534980301,2.84163499395593,16.3629360303046,15.7132460187334,18.5463923304845,21.3070262026689,20.8570085652248,22.3687313686698,24.1835302540424,33.5341751749524,33.2781225746433,29.456213134513,29.5501435342371,33.2382119138008,35.6727969317811,27.6633145266724,28.5859671959592,62.6664046721099,46.6157894078158,1.32167513193519,5.28901133327089,7.89166526980366,9.0572302025571,8.76298736990235,11.0925938542838,9.11749979763968,8.17970192284004,8.54152310780121,10.0466362381647,10.0534083520108,10.1467800740987,14.4273424468149,11.6846523125049,9.07779809473716,9.16049856970089,8.72472344384176,7.88314737007129,5.63538678365402,5.29493452397817,4.46090720485539,6.66290288958026,6.57659986092276,6.7900668070617,4.55296310739987,5.92306386824642,6.52195779591728,2.33583148002532,2.55526693647164,3.14806957338795,2.63718157805054,3.13530307678142,4.07401362850272,4.89083433666378,4.70192157647603,2.19649130550465,1.43768206527355,2.60498663367952,6.55279113540577,6.31447194867779,5.02312757861354,7.23665282045051,15.3345147838282,10.0430448238357,9.61493361007953,9.50572480341054,5.16318546234705,10.0503754465089,7.37935286746643,15.8058254764817,12.2955412402829,17.4957104822532,20.7291199254733,19.99132439532,18.9953480052485,14.8988530338957,25.6345182696763,10.8781136763742,8.85175691434265,7.17435540392304,20.2293743384618,21.2153152731888,4.59017847054691,49.2318308048527,12.304820557234,9.37052986311932,21.7577631710127,11.2315335037699,16.932699230262,13.3045969470751,12.5491317519217,17.5353514746787,17.392662229647,90.2912899145278,8.37446502728785,3.73937767701236,6.18970445543589,20.1263550026493,10.619611067197,5.58395463156457,4.83717691143602,4.90373207365335,8.85905678642318,8.60818414242997,7.23599220871019,3.99887102425256,8.55593708123331,8.53299246426703,9.48767477174989,5.15677716240934,28.937366489072,9.36317688962813,12.9358683782754,10.2881776815164,12.945837055886,13.1992925025532,13.1639216481697,28.9241701658869,3.28540391289194,1.0591603543191,7.27743713581374,11.5420377059036,10.172258881842,10.4944489374991,7.28171298419132,5.41664969158702,7.86998258900597,21.5093350332191,6.4930934703184,8.2554747185289,5.00025223898222,3.01389531207506,4.78429797023588,5.0331198105435,11.0485979496006,8.6769900440668,9.25939824489639,21.9574242143476,7.27572785236611,10.9792512248498,8.7484326065659,9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| |||
|short_description=p1@Dnajb5 | |||
}} |
Revision as of 11:22, 5 August 2015
Short description: | p1@Dnajb5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dnajb5_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000098112, ENSMUST00000123501, uc008som.1_5end |
EntrezGene: | 56323 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.54e-12 | 43 |
CNS neuron (sensu Vertebrata) | 4.48e-12 | 23 |
neuroblast (sensu Vertebrata) | 4.48e-12 | 23 |
ectodermal cell | 7.74e-12 | 44 |
neurectodermal cell | 7.74e-12 | 44 |
neuron | 6.22e-11 | 33 |
neuronal stem cell | 6.22e-11 | 33 |
neuroblast | 6.22e-11 | 33 |
electrically signaling cell | 6.22e-11 | 33 |
electrically responsive cell | 3.85e-08 | 39 |
electrically active cell | 3.85e-08 | 39 |