FFCP PHASE1:Mm9::chr6:17231304..17231364,+: Difference between revisions
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{{FFCP|EntrezGene=12390|HGNC=|MCL_coexpression_id=94|UniProt=Q924U4,D3Z147,Q9WVC3|association_with_transcript=0bp_to_ENSMUST00000115459,ENSMUST00000115462,NM_016900,uc009azm.1,uc009azn.1_5end|description=CAGE_peak_1_at_Cav2_5end|id=chr6:17231304..17231364,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005153!3.52e-09!17;UBERON:0005178!3.66e-09!17;UBERON:0005181!3.66e-09!17;UBERON:0002224!3.66e-09!17;UBERON:0000915!3.66e-09!17;UBERON:0008947!3.66e-09!17;UBERON:0003258!3.66e-09!17;UBERON:0002048!1.57e-07!14;UBERON:0000117!1.57e-07!14;UBERON:0000171!1.57e-07!14;UBERON:0000170!1.57e-07!14;UBERON:0005597!1.57e-07!14;UBERON:0000118!1.57e-07!14;UBERON:0003103!2.93e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0005153,3.43e-09,17;UBERON:0005178,3.57e-09,17;UBERON:0005181,3.57e-09,17;UBERON:0002224,3.57e-09,17;UBERON:0000915,3.57e-09,17;UBERON:0008947,3.57e-09,17;UBERON:0003258,3.57e-09,17;UBERON:0002048,1.54e-07,14;UBERON:0000117,1.54e-07,14;UBERON:0000171,1.54e-07,14;UBERON:0000170,1.54e-07,14;UBERON:0005597,1.54e-07,14;UBERON:0000118,1.54e-07,14;UBERON:0003103,2.87e-07,43|phase1_expression=10.2495262147068,0,0.454999239389536,0,0.500895729946347,0.33575854382378,0,0,0,0,0,0,0.171200729931206,0,1.33243904726265,1.21485160433896,0,0.315462165358238,0.411343300817216,0,80.8761689336674,1.29078236561151,2.08959831311148,1.75991665072747,2.75291137280604,0.57423196411502,0.86152399231815,0.861884930743556,0.570070258369122,0.504060259519861,2.88249663851896,0,0,0,0,0,0,0.418531630736908,2.3440060335714,2.61761871986899,0,0,0.485510353031154,42.1754340218184,36.0901875141472,9.36088436024576,12.5182615095686,21.1484401689033,41.5206885368152,61.6342780065478,29.2571621197008,21.5628846547457,0.838913030288682,0,0,6.43148590089868,12.0344044774278,23.7209162447623,1.61853168687678,2.64495489636016,2.53532561402472,2.71075625655306,3.55717918444456,8.09909745553259,8.89979726310277,3.5524005747305,18.5752068521411,18.4424786554346,2.69592992002042,3.37514845829227,1.47227472945967,10.8547374073445,10.3808214247258,0.734944795289724,0.575072826109418,0,11.0115880999389,18.1316020080967,13.6709814598057,0.923204014111357,1.9212405156506,1.56274011167028,16.7509799400829,23.0732670112989,19.8637722109853,10.9012576625257,11.2473627831291,3.72798891650601,69.2137407065302,113.886341080926,151.888992079679,66.2526385275668,0,0.539703191637817,0.649776417447669,2.68816132258401,55.475545952042,44.141453547717,31.1743205523443,23.6737514921928,1.97180787687353,20.5322363862909,5.09610479413291,0,122.533929212347,106.411143499541,107.676706788149,32.0856702010559,29.0010429684832,41.4153567990861,10.4091196059682,12.4830846107978,15.4512383161559,20.9504470368145,18.1086608988985,61.7022963428707,36.8320501924217,370.897350499573,22.1152637987469,49.6624229338546,42.1807300259352,37.8202697445473,13.0474232852686,13.1751358655196,9.63454851341893,9.96282515313506,3.23500836165985,1.79970819298022,2.28726408731516,23.5171303865572,22.4175295381127,5.40313714085317,33.5480937971094,30.4301394223093,22.4411088124325,16.3863675698435,20.7752302254645,58.5956831573538,54.8408385801074,33.4602550859494,4.42409506073193,5.28774840196988,8.46292010085141,11.9056806090215,11.6342413548771,12.0426897067759,13.3993466120412,40.0990224645474,3.23351989399263,4.16033376369202,6.51019159406611,10.5213951565236,17.7950239504383,44.9245294813595,62.9693337408307,5.9710280045548,2.1066395619397,1.54408744268829,0.284163499395593,7.87077935634907,11.9608290590359,17.8261440846405,27.2256445922992,30.695220152595,42.2691889311416,57.9009522428516,64.6538897373082,59.5503246072564,70.9252953127101,141.51235403618,126.386274081989,141.521587827722,158.954283470721,158.229367718478,27.3376933133365,20.992540925374,2.97376904685418,8.99131926656051,10.6644125267617,9.75394021813842,11.5980715189884,11.0925938542838,20.0140239460383,27.7729414124336,21.8283368310475,29.1517149861499,24.6308504624264,29.6445143341315,31.7791462004166,20.6728463990471,22.4783571869682,18.5201384126561,8.53505554288868,13.8240700257772,23.6686244913469,29.3257912097252,33.5537802799993,27.9140563163468,62.2879890673934,83.2521234604956,89.646273597425,91.8074899578196,17.7871576252289,3.50374722003798,1.96558995113203,3.14806957338795,3.04290182082754,2.894125917029,8.40265310878685,11.5078454980324,6.48540907100142,11.2570179407113,25.8782771749238,24.5613025461212,21.2185617717901,24.5001511608698,17.4015491116255,11.5786445127208,555.737596021147,9.09558776498327,23.7928865605358,38.3623893851925,69.4683134933966,147.238000291356,252.802346620947,267.528231213042,203.979876473411,187.137662753215,210.63974939654,502.8965128626,439.65596383057,561.816943530591,67.8560777726725,34.2660580805787,83.1081621402171,97.95754493818,33.7156238974363,22.504643825703,71.1477662934771,109.319911479494,3.47059041357882,1.56175497718655,1.50796378412959,1.43381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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12390 | |||
|HGNC= | |||
|MCL_coexpression_id=94 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q924U4,uniprot:D3Z147,uniprot:Q9WVC3 | |||
|association_with_transcript=0bp_to_ENSMUST00000115459,ENSMUST00000115462,NM_016900,uc009azm.1,uc009azn.1_5end | |||
|cluster_id=chr6:17231304..17231364,+ | |||
|description=CAGE_peak_1_at_Cav2_5end | |||
|id=chr6:17231304..17231364,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005153!3.52e-09!17;UBERON:0005178!3.66e-09!17;UBERON:0005181!3.66e-09!17;UBERON:0002224!3.66e-09!17;UBERON:0000915!3.66e-09!17;UBERON:0008947!3.66e-09!17;UBERON:0003258!3.66e-09!17;UBERON:0002048!1.57e-07!14;UBERON:0000117!1.57e-07!14;UBERON:0000171!1.57e-07!14;UBERON:0000170!1.57e-07!14;UBERON:0005597!1.57e-07!14;UBERON:0000118!1.57e-07!14;UBERON:0003103!2.93e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005153,3.43e-09,17;UBERON:0005178,3.57e-09,17;UBERON:0005181,3.57e-09,17;UBERON:0002224,3.57e-09,17;UBERON:0000915,3.57e-09,17;UBERON:0008947,3.57e-09,17;UBERON:0003258,3.57e-09,17;UBERON:0002048,1.54e-07,14;UBERON:0000117,1.54e-07,14;UBERON:0000171,1.54e-07,14;UBERON:0000170,1.54e-07,14;UBERON:0005597,1.54e-07,14;UBERON:0000118,1.54e-07,14;UBERON:0003103,2.87e-07,43 | |||
|phase1_expression=10.2495262147068,0,0.454999239389536,0,0.500895729946347,0.33575854382378,0,0,0,0,0,0,0.171200729931206,0,1.33243904726265,1.21485160433896,0,0.315462165358238,0.411343300817216,0,80.8761689336674,1.29078236561151,2.08959831311148,1.75991665072747,2.75291137280604,0.57423196411502,0.86152399231815,0.861884930743556,0.570070258369122,0.504060259519861,2.88249663851896,0,0,0,0,0,0,0.418531630736908,2.3440060335714,2.61761871986899,0,0,0.485510353031154,42.1754340218184,36.0901875141472,9.36088436024576,12.5182615095686,21.1484401689033,41.5206885368152,61.6342780065478,29.2571621197008,21.5628846547457,0.838913030288682,0,0,6.43148590089868,12.0344044774278,23.7209162447623,1.61853168687678,2.64495489636016,2.53532561402472,2.71075625655306,3.55717918444456,8.09909745553259,8.89979726310277,3.5524005747305,18.5752068521411,18.4424786554346,2.69592992002042,3.37514845829227,1.47227472945967,10.8547374073445,10.3808214247258,0.734944795289724,0.575072826109418,0,11.0115880999389,18.1316020080967,13.6709814598057,0.923204014111357,1.9212405156506,1.56274011167028,16.7509799400829,23.0732670112989,19.8637722109853,10.9012576625257,11.2473627831291,3.72798891650601,69.2137407065302,113.886341080926,151.888992079679,66.2526385275668,0,0.539703191637817,0.649776417447669,2.68816132258401,55.475545952042,44.141453547717,31.1743205523443,23.6737514921928,1.97180787687353,20.5322363862909,5.09610479413291,0,122.533929212347,106.411143499541,107.676706788149,32.0856702010559,29.0010429684832,41.4153567990861,10.4091196059682,12.4830846107978,15.4512383161559,20.9504470368145,18.1086608988985,61.7022963428707,36.8320501924217,370.897350499573,22.1152637987469,49.6624229338546,42.1807300259352,37.8202697445473,13.0474232852686,13.1751358655196,9.63454851341893,9.96282515313506,3.23500836165985,1.79970819298022,2.28726408731516,23.5171303865572,22.4175295381127,5.40313714085317,33.5480937971094,30.4301394223093,22.4411088124325,16.3863675698435,20.7752302254645,58.5956831573538,54.8408385801074,33.4602550859494,4.42409506073193,5.28774840196988,8.46292010085141,11.9056806090215,11.6342413548771,12.0426897067759,13.3993466120412,40.0990224645474,3.23351989399263,4.16033376369202,6.51019159406611,10.5213951565236,17.7950239504383,44.9245294813595,62.9693337408307,5.9710280045548,2.1066395619397,1.54408744268829,0.284163499395593,7.87077935634907,11.9608290590359,17.8261440846405,27.2256445922992,30.695220152595,42.2691889311416,57.9009522428516,64.6538897373082,59.5503246072564,70.9252953127101,141.51235403618,126.386274081989,141.521587827722,158.954283470721,158.229367718478,27.3376933133365,20.992540925374,2.97376904685418,8.99131926656051,10.6644125267617,9.75394021813842,11.5980715189884,11.0925938542838,20.0140239460383,27.7729414124336,21.8283368310475,29.1517149861499,24.6308504624264,29.6445143341315,31.7791462004166,20.6728463990471,22.4783571869682,18.5201384126561,8.53505554288868,13.8240700257772,23.6686244913469,29.3257912097252,33.5537802799993,27.9140563163468,62.2879890673934,83.2521234604956,89.646273597425,91.8074899578196,17.7871576252289,3.50374722003798,1.96558995113203,3.14806957338795,3.04290182082754,2.894125917029,8.40265310878685,11.5078454980324,6.48540907100142,11.2570179407113,25.8782771749238,24.5613025461212,21.2185617717901,24.5001511608698,17.4015491116255,11.5786445127208,555.737596021147,9.09558776498327,23.7928865605358,38.3623893851925,69.4683134933966,147.238000291356,252.802346620947,267.528231213042,203.979876473411,187.137662753215,210.63974939654,502.8965128626,439.65596383057,561.816943530591,67.8560777726725,34.2660580805787,83.1081621402171,97.95754493818,33.7156238974363,22.504643825703,71.1477662934771,109.319911479494,3.47059041357882,1.56175497718655,1.50796378412959,1.43381278771531,3.56477878531831,1.98153571552183,1.21443210502468,8.18316402151673,6.32460444714438,24.0990987316355,61.7439370655969,11.0400674273698,16.6144698540648,31.5092934877543,17.2568679841952,6.06951590387454,7.86041248108353,14.5225911412042,8.26845300066164,34.4327365697199,36.9552459230556,31.9909681940205,39.5712090007041,33.8159330991323,24.2462799722497,27.8465966770104,12.2558258071364,5.58189391497062,4.2688365648309,10.502514716548,14.1872186913819,10.7021290561242,18.7585883486418,7.61162372786498,14.0803024838226,18.2175580942885,218.764170870522,92.6660741531118,83.1541797483914,156.029536789139,95.7366198905154,67.6260506949652,20.6951394007194,35.6016579860179,9.05615668228619,18.57481811669,20.1862034832986,11.3021074202815,7.10809984149331,9.83746144788047,7.47905091972963,6.57771825921193,7.73919853304773,37.2321541025894,7.43389584915668,25.2116139237292,37.5858586059868,42.6540123869516,50.6601147891132,61.3632776050934,50.3359545367296,56.5392834685504,24.8860748720242,13.6694648879124,1.69107881605257,5.68162874967119,4.46737924234164,6.02798683866548,7.4912697617084,12.8406655372991,7.62822051197401,16.4057524903377,10.3810750981454,11.3544536788223,16.41771035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| |||
|short_description=p1@Cav2 | |||
}} |
Revision as of 11:15, 5 August 2015
Short description: | p1@Cav2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cav2_5end |
Coexpression cluster: | MCL_coexpression_mm9:94 |
Association with transcript: | 0bp_to_ENSMUST00000115459, ENSMUST00000115462, NM_016900, uc009azm.1, uc009azn.1_5end |
EntrezGene: | 12390 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial bud | 3.43e-09 | 17 |
thoracic cavity element | 3.57e-09 | 17 |
thoracic segment organ | 3.57e-09 | 17 |
thoracic cavity | 3.57e-09 | 17 |
thoracic segment of trunk | 3.57e-09 | 17 |
respiratory primordium | 3.57e-09 | 17 |
endoderm of foregut | 3.57e-09 | 17 |
lung | 1.54e-07 | 14 |
respiratory tube | 1.54e-07 | 14 |
respiration organ | 1.54e-07 | 14 |
pair of lungs | 1.54e-07 | 14 |
lung primordium | 1.54e-07 | 14 |
lung bud | 1.54e-07 | 14 |
compound organ | 2.87e-07 | 43 |