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FFCP PHASE1:Mm9::chr7:57230598..57230710,+: Difference between revisions

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{{FFCP|EntrezGene=338352|HGNC=|MCL_coexpression_id=159|UniProt=D3YWD8|association_with_transcript=0bp_to_ENSMUST00000107603_5end|description=CAGE_peak_1_at_Nell1_5end|id=chr7:57230598..57230710,+|ontology_enrichment_celltype=CL:0000117!2.71e-09!23;CL:0000337!2.71e-09!23;CL:0000540!1.97e-08!33;CL:0000047!1.97e-08!33;CL:0000031!1.97e-08!33;CL:0000404!1.97e-08!33;CL:0002319!5.46e-07!43;CL:0000221!6.17e-07!44;CL:0000133!6.17e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,6.26e-09,23;CL:0000337,6.26e-09,23;CL:0000540,2.12e-07,33;CL:0000047,2.12e-07,33;CL:0000031,2.12e-07,33;CL:0000404,2.12e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.92e-23!73;UBERON:0005743!1.92e-23!73;UBERON:0000073!1.72e-22!75;UBERON:0001016!1.72e-22!75;UBERON:0002346!1.72e-22!71;UBERON:0003075!1.72e-22!71;UBERON:0007284!1.72e-22!71;UBERON:0001049!8.24e-22!52;UBERON:0005068!8.24e-22!52;UBERON:0006241!8.24e-22!52;UBERON:0007135!8.24e-22!52;UBERON:0000033!3.18e-21!63;UBERON:0000955!1.83e-20!50;UBERON:0006238!1.83e-20!50;UBERON:0004121!5.46e-20!102;UBERON:0000924!5.46e-20!102;UBERON:0006601!5.46e-20!102;UBERON:0002616!8.59e-20!49;UBERON:0003056!5.40e-18!49;UBERON:0003080!1.79e-16!40;UBERON:0002780!8.79e-16!39;UBERON:0001890!8.79e-16!39;UBERON:0006240!8.79e-16!39;UBERON:0002020!4.47e-13!34;UBERON:0002791!6.02e-10!29;UBERON:0003528!6.02e-10!29;UBERON:0001893!6.02e-10!29;UBERON:0007811!9.34e-10!86;UBERON:0000153!1.55e-09!94;UBERON:0000468!4.18e-09!333;UBERON:0001894!2.73e-07!10;UBERON:0006222!2.73e-07!10;UBERON:0002619!5.23e-07!17;UBERON:0000922!8.55e-07!328|ontology_enrichment_uberon_v019_2=UBERON:0002346,9.89e-26,64;UBERON:0003075,9.89e-26,64;UBERON:0007284,9.89e-26,64;UBERON:0000073,1.07e-24,54;UBERON:0001017,1.71e-23,73;UBERON:0001049,5.19e-23,52;UBERON:0005068,5.19e-23,52;UBERON:0006241,5.19e-23,52;UBERON:0007135,5.19e-23,52;UBERON:0010371,3.63e-22,73;UBERON:0001016,4.58e-22,75;UBERON:0004121,2.04e-19,95;UBERON:0000924,2.04e-19,95;UBERON:0006601,2.04e-19,95;UBERON:0000955,3.42e-19,47;UBERON:0006238,3.42e-19,47;UBERON:0003056,1.30e-18,49;UBERON:0002616,1.79e-18,46;UBERON:0003080,7.40e-17,40;UBERON:0002780,4.23e-16,39;UBERON:0001890,4.23e-16,39;UBERON:0006240,4.23e-16,39;UBERON:0002020,3.94e-13,34;UBERON:0010314,2.33e-12,92;UBERON:0003528,9.69e-10,29;UBERON:0002791,9.69e-10,29;UBERON:0001893,9.69e-10,29;UBERON:0001894,5.56e-08,10;UBERON:0006222,5.56e-08,10;UBERON:0002619,1.15e-07,17;UBERON:0003076,8.09e-07,12;UBERON:0003057,8.09e-07,12|phase1_expression=13.9329496981171,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48677489619386,0,0,0,0,0,0,0,0.380046838912748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48840250208714,11.4236815021925,31.8865034481825,0.279972843250725,1.43752564364972,0,0,0,0,0,0,9.91350658212029,9.52183762689659,17.747279298173,0.677689064138264,0,0,0.988866362566974,0,0.299600110518405,0,0.414758449233911,0.675029691658453,0.841299845405528,24.5659846587271,22.307722636113,2.69479758272899,2.58782771749238,1.83843757322004,20.9220173898839,26.1759043074635,22.733766921924,9.62769900430415,10.9785172322892,5.73004707612436,9.77140496504833,24.1987922313622,12.6822545654752,17.0884579574727,21.9252388430619,21.2495368240843,0.227178579999552,0.226714680320357,0.289864488701678,0,0,0,0,0,0.983110940922263,0,0,0,1.26759077799012,0,0,0,0,0,0,0.22836775943812,0,0.742210695324124,1.56136794089522,1.21786191324856,1.61430848079241,0.60289056221049,0.470354828542819,0.628332956648377,0.741584903203122,0.144599356919912,0,0.323533699894818,0.220841518460394,0.969750506270444,0,7.90508151931177,12.3573557019938,1.02182822083437,0,0,0,24.1162929441765,8.23501085073528,3.76963056338593,14.7750672163435,15.5986428971502,25.7657175253855,22.064811777215,7.53611292492341,0.995255764880744,0.252722758433675,1.47309299120532,2.47228841629137,4.13823787980251,7.38254732201932,6.17889753126432,4.76255494059295,4.61209393025459,3.37326208415024,4.9153640440413,0,4.53854592402766,1.93546236580344,3.72632745126877,5.28289773528636,1.39300866608867,1.23469281844766,15.5246728118425,0,0,0,0.414251545071004,0.938104239924385,0.36012412292203,0.946978942340841,0.393528463494808,0.462801338662135,0,0.268273401399619,0,0.493679549740441,0.164167464079095,0,0,0,0,14.7202963994889,10.3933658503077,0,0,4.47905326123991,3.48355007790658,2.70621668776396,3.83198696784351,3.33567065767305,2.09248188723815,0.949058123089023,1.31759163779209,3.51869292320377,1.59165177632921,0.38992817423824,0.898819408654221,0.216138049874694,0.398282546508734,7.96605184002943,10.5108631600951,12.3978509240388,7.73875045812194,6.7883370508669,5.11991485199326,0.189709611372772,0,0.156998727841375,0,0,0.500535317148282,0.589676985339609,0.224862112384854,0.202860121388503,0,0.25462585178142,0.287696137450811,0,0,0,0.372140947668503,0,0,0,0,0.369506380333209,3.41084541186873,2.11854469374634,3.39490171550376,3.28566347603903,4.35516269348721,6.42717830392237,2.34160377429359,4.41378403497335,3.9863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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:338352
|HGNC=
|MCL_coexpression_id=159
|TSSclassifier=NA
|UniProt=uniprot:D3YWD8
|association_with_transcript=0bp_to_ENSMUST00000107603_5end
|cluster_id=chr7:57230598..57230710,+
|description=CAGE_peak_1_at_Nell1_5end
|id=chr7:57230598..57230710,+
|ontology_enrichment_celltype=CL:0000117!2.71e-09!23;CL:0000337!2.71e-09!23;CL:0000540!1.97e-08!33;CL:0000047!1.97e-08!33;CL:0000031!1.97e-08!33;CL:0000404!1.97e-08!33;CL:0002319!5.46e-07!43;CL:0000221!6.17e-07!44;CL:0000133!6.17e-07!44
|ontology_enrichment_celltype_v019_2=CL:0000117,6.26e-09,23;CL:0000337,6.26e-09,23;CL:0000540,2.12e-07,33;CL:0000047,2.12e-07,33;CL:0000031,2.12e-07,33;CL:0000404,2.12e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.92e-23!73;UBERON:0005743!1.92e-23!73;UBERON:0000073!1.72e-22!75;UBERON:0001016!1.72e-22!75;UBERON:0002346!1.72e-22!71;UBERON:0003075!1.72e-22!71;UBERON:0007284!1.72e-22!71;UBERON:0001049!8.24e-22!52;UBERON:0005068!8.24e-22!52;UBERON:0006241!8.24e-22!52;UBERON:0007135!8.24e-22!52;UBERON:0000033!3.18e-21!63;UBERON:0000955!1.83e-20!50;UBERON:0006238!1.83e-20!50;UBERON:0004121!5.46e-20!102;UBERON:0000924!5.46e-20!102;UBERON:0006601!5.46e-20!102;UBERON:0002616!8.59e-20!49;UBERON:0003056!5.40e-18!49;UBERON:0003080!1.79e-16!40;UBERON:0002780!8.79e-16!39;UBERON:0001890!8.79e-16!39;UBERON:0006240!8.79e-16!39;UBERON:0002020!4.47e-13!34;UBERON:0002791!6.02e-10!29;UBERON:0003528!6.02e-10!29;UBERON:0001893!6.02e-10!29;UBERON:0007811!9.34e-10!86;UBERON:0000153!1.55e-09!94;UBERON:0000468!4.18e-09!333;UBERON:0001894!2.73e-07!10;UBERON:0006222!2.73e-07!10;UBERON:0002619!5.23e-07!17;UBERON:0000922!8.55e-07!328
|ontology_enrichment_uberon_v019_2=UBERON:0002346,9.89e-26,64;UBERON:0003075,9.89e-26,64;UBERON:0007284,9.89e-26,64;UBERON:0000073,1.07e-24,54;UBERON:0001017,1.71e-23,73;UBERON:0001049,5.19e-23,52;UBERON:0005068,5.19e-23,52;UBERON:0006241,5.19e-23,52;UBERON:0007135,5.19e-23,52;UBERON:0010371,3.63e-22,73;UBERON:0001016,4.58e-22,75;UBERON:0004121,2.04e-19,95;UBERON:0000924,2.04e-19,95;UBERON:0006601,2.04e-19,95;UBERON:0000955,3.42e-19,47;UBERON:0006238,3.42e-19,47;UBERON:0003056,1.30e-18,49;UBERON:0002616,1.79e-18,46;UBERON:0003080,7.40e-17,40;UBERON:0002780,4.23e-16,39;UBERON:0001890,4.23e-16,39;UBERON:0006240,4.23e-16,39;UBERON:0002020,3.94e-13,34;UBERON:0010314,2.33e-12,92;UBERON:0003528,9.69e-10,29;UBERON:0002791,9.69e-10,29;UBERON:0001893,9.69e-10,29;UBERON:0001894,5.56e-08,10;UBERON:0006222,5.56e-08,10;UBERON:0002619,1.15e-07,17;UBERON:0003076,8.09e-07,12;UBERON:0003057,8.09e-07,12
|phase1_expression=13.9329496981171,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48677489619386,0,0,0,0,0,0,0,0.380046838912748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48840250208714,11.4236815021925,31.8865034481825,0.279972843250725,1.43752564364972,0,0,0,0,0,0,9.91350658212029,9.52183762689659,17.747279298173,0.677689064138264,0,0,0.988866362566974,0,0.299600110518405,0,0.414758449233911,0.675029691658453,0.841299845405528,24.5659846587271,22.307722636113,2.69479758272899,2.58782771749238,1.83843757322004,20.9220173898839,26.1759043074635,22.733766921924,9.62769900430415,10.9785172322892,5.73004707612436,9.77140496504833,24.1987922313622,12.6822545654752,17.0884579574727,21.9252388430619,21.2495368240843,0.227178579999552,0.226714680320357,0.289864488701678,0,0,0,0,0,0.983110940922263,0,0,0,1.26759077799012,0,0,0,0,0,0,0.22836775943812,0,0.742210695324124,1.56136794089522,1.21786191324856,1.61430848079241,0.60289056221049,0.470354828542819,0.628332956648377,0.741584903203122,0.144599356919912,0,0.323533699894818,0.220841518460394,0.969750506270444,0,7.90508151931177,12.3573557019938,1.02182822083437,0,0,0,24.1162929441765,8.23501085073528,3.76963056338593,14.7750672163435,15.5986428971502,25.7657175253855,22.064811777215,7.53611292492341,0.995255764880744,0.252722758433675,1.47309299120532,2.47228841629137,4.13823787980251,7.38254732201932,6.17889753126432,4.76255494059295,4.61209393025459,3.37326208415024,4.9153640440413,0,4.53854592402766,1.93546236580344,3.72632745126877,5.28289773528636,1.39300866608867,1.23469281844766,15.5246728118425,0,0,0,0.414251545071004,0.938104239924385,0.36012412292203,0.946978942340841,0.393528463494808,0.462801338662135,0,0.268273401399619,0,0.493679549740441,0.164167464079095,0,0,0,0,14.7202963994889,10.3933658503077,0,0,4.47905326123991,3.48355007790658,2.70621668776396,3.83198696784351,3.33567065767305,2.09248188723815,0.949058123089023,1.31759163779209,3.51869292320377,1.59165177632921,0.38992817423824,0.898819408654221,0.216138049874694,0.398282546508734,7.96605184002943,10.5108631600951,12.3978509240388,7.73875045812194,6.7883370508669,5.11991485199326,0.189709611372772,0,0.156998727841375,0,0,0.500535317148282,0.589676985339609,0.224862112384854,0.202860121388503,0,0.25462585178142,0.287696137450811,0,0,0,0.372140947668503,0,0,0,0,0.369506380333209,3.41084541186873,2.11854469374634,3.39490171550376,3.28566347603903,4.35516269348721,6.42717830392237,2.34160377429359,4.41378403497335,3.98636441367795,2.07291199254733,0.655453258862952,0,0.433947175744535,0,0,0,0,12.5229460190478,10.4318401067061,0,0,5.36363973007636,5.85658116444958,2.58508077279359,0.716906393857656,0.891194696329576,1.98153571552183,0,1.46127928955656,0.395287777946524,18.9579576688866,1.56134093729095,11.9303954457061,7.4928001302645,7.4236555337641,1.32745138339963,3.8844901784797,3.02323556964751,2.64047111658257,3.2483208216885,3.68922177532713,2.06742634534577,2.90826983582004,4.27796854061666,2.52829406348653,1.05418608574999,0,7.14923172082955,9.90336017172206,11.5129228566652,14.3605813471167,28.3744373827638,21.0475204770443,14.6448628335888,21.6170113871366,0.23467170806371,0.21183207086382,0.882113592219848,0.65954501176592,2.09903754704677,1.20625849856312,0.358117032009409,0.492422699235184,0.291480836629851,15.5757253688828,0,1.03193433981611,0.185194527369712,0,0,0,0,0,0,0,1.26534397432454,5.48962561242491,3.78018692876304,2.92723614420256,3.49380101993884,1.75323650300267,1.90102948168273,1.57053565190418,0.129614973291793,0,0,8.67195967055077,5.62558867554132,3.88902376688095,3.48731523389874,3.54807863530634,2.34714477291508,1.0416350787516,0.209718688851422,0.483168241652012,0,0.316011120628178,3.04087822935246,1.43795340030758,0.649604114888975,0.716106782669926,0,0,0.147689527174577,0.201932899896295,0.0762068066549998,0,0,0,0.116876902181569,0.453460767230423,0,0.0897138566094757,0,0.19318959403219,0.93841237725591,3.11357761254351,0,1.00314420807073,6.21227026878773,7.36520378411483,7.44764167471216,6.01486138202907,5.48066015816514,9.06472676867641,7.42524750254986,6.75481804836331,9.06284817968409,6.73088405277366,0.93408612825759,3.59122386060928,5.46347538413229,7.05009479498053,3.35381060204772,3.30918315210025,5.55616819504038,4.12070114477788,4.49286893428541,5.55933865880354,6.84394109703647,4.52703219326583,5.05664140337365,4.48176066834085,5.16919220600519,2.85776214769844,4.28772005995965,4.62982129112892,4.53294490883637,5.88795680537589,2.74295401908332,4.79184676630211,3.57654284920981,5.66851024866081,6.02300034658116,5.4153349050673,3.65855945745545,4.47218509444333,4.07412341537585,1.68342681497322,5.21994079746366,4.92522411877817,7.36615877705441,4.95797891795091,4.43685205256625,6.99469618226249,4.67863216890817,4.72716318906256,1.53030665655075,1.98532277207564,1.15933917810211
|short_description=p1@Nell1
}}

Revision as of 10:41, 5 August 2015

Short description:p1@Nell1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nell1_5end
Coexpression cluster:MCL_coexpression_mm9:159
Association with transcript: 0bp_to_ENSMUST00000107603_5end
EntrezGene:338352
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Nell1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G713.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.49
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.49
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B811.42
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C331.89
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C39.91
Mouse Granule cells, donor2.CNhs12357.11731-123E39.52
Mouse Granule cells, donor3.CNhs12108.11636-122C717.75
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F124.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D522.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.69
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.59
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D320.92
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F326.18
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D722.73
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.63
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.98
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.77
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E524.20
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D617.09
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F621.93
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E121.25
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B27.91
cerebellum, neonate N30.CNhs11135.1395-42I212.36
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A424.12
corpus striatum, adult.CNhs10487.19-21D88.24
corpus striatum, neonate N00.CNhs11226.630-43F13.77
cortex, adult.CNhs10473.12-14D514.78
cortex, neonate N30.CNhs11107.1392-42F215.60
diencephalon, adult.CNhs10482.20-12F225.77
diencephalon, neonate N30.CNhs11201.1388-42B222.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B17.54
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C62.47
eyeball, embryo E14.CNhs10521.399-16E24.14
eyeball, embryo E15.CNhs10593.426-16C97.38
eyeball, embryo E17.CNhs11023.1261-18D46.18
eyeball, neonate N00.CNhs11207.633-15C64.76
eyeball, neonate N01.CNhs11140.1532-43E74.61
eyeball, neonate N02.CNhs11205.1551-44G83.37
eyeball, neonate N16.CNhs11188.777-19A24.92
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H24.54
forelimb, embryo E13.CNhs10589.384-1E21.94
forelimb, embryo E14.CNhs10577.413-26A83.73
forelimb, embryo E15.CNhs11007.437-20E75.28
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I615.52
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E814.72
hippocampus, neonate N00.CNhs11228.627-43G110.39
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I54.48
intestine, embryo E13.CNhs11010.381-16D53.48
intestine, embryo E15.CNhs10602.976-16D82.71
intestine, embryo E16.CNhs10585.463-22H43.83
intestine, embryo E17.CNhs10582.482-18D33.34
intestine, embryo E18.CNhs10526.1289-20F72.09
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B83.52
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I97.97
kidney, embryo E15.CNhs10997.434-16F810.51
kidney, embryo E16.CNhs10584.464-22A512.40
kidney, embryo E17.CNhs11028.483-18I27.74
kidney, embryo E18.CNhs11001.1288-20C76.79
kidney, neonate N00.CNhs11214.646-21G75.12
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G23.41
lung, embryo E14.CNhs10604.404-26F82.12
lung, embryo E15.CNhs11020.432-17C53.39
lung, embryo E16.CNhs10998.458-17B63.29
lung, embryo E17.CNhs10605.480-44A64.36
lung, embryo E18.CNhs10583.1287-20I66.43
lung, neonate N00.CNhs11224.640-42C62.34
lung, neonate N06.CNhs11212.683-20E54.41
lung, neonate N07.CNhs11111.715-19A33.99
lung, neonate N10.CNhs11219.750-23E62.07
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C212.52
medulla oblongata, neonate N30.CNhs11200.1396-42A310.43
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.36
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.86
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I918.96
ovary, adult.CNhs10507.91-2I71.56
ovary, embryo E18.CNhs11040.505-44H711.93
ovary, neonate N00.CNhs11217.1299-22I47.49
oviduct, adult pregnant day01.CNhs10500.988-6G67.42
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F43.88
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E52.64
pancreas, embryo E17.CNhs10599.1558-45G33.25
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D84.28
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G87.15
pituitary gland, embryo E12.CNhs11018.346-16E69.90
pituitary gland, embryo E13.CNhs11009.370-44C711.51
pituitary gland, embryo E14.CNhs11037.398-44A514.36
pituitary gland, embryo E15.CNhs10592.427-16B928.37
pituitary gland, embryo E16.CNhs11036.449-43F621.05
pituitary gland, embryo E17.CNhs11039.1265-44F514.64
pituitary gland, neonate N00.CNhs11190.1308-22E921.62
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G42.10
skin, neonate N03.CNhs11215.662-22H31.21
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C915.58
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G85.49
stomach, embryo E16.CNhs11022.459-17D43.78
stomach, embryo E17.CNhs11006.1035-18D52.93
stomach, embryo E18.CNhs10999.1286-20C63.49
stomach, neonate N03.CNhs11193.1340-24B81.75
stomach, neonate N07.CNhs11210.718-18A91.90
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F58.67
testis, embryo E15.CNhs11034.443-27C55.63
testis, embryo E16.CNhs11033.470-26G53.89
testis, embryo E17.CNhs11029.486-18I53.49
testis, embryo E18.CNhs11027.503-18G53.55
testis, neonate N00.CNhs11189.1300-22B72.35
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I43.04
thymus, embryo E15.CNhs11005.430-45I21.44
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E53.11
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A37.45
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.01
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.75
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.06
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.73
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H25.46
whole body, embryo E14.5.CNhs10578.420-27D27.05
whole body, embryo E14.CNhs10519.395-14B13.35
whole body, embryo E16.CNhs10514.453-14F23.31
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.06
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.63
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.89
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.79
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.67
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.02
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.66
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.07
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.22
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.93
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G57.37
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.96
whole body, embryo E17.5.CNhs10513.490-9F94.44
whole body, embryo E17.CNhs10517.475-3I56.99
whole body, embryo E18.CNhs10516.493-3B34.68
whole body, neonate N00.CNhs10525.657-19C24.73
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.26e-0923
neuroblast (sensu Vertebrata)6.26e-0923
neuron2.12e-0733
neuronal stem cell2.12e-0733
neuroblast2.12e-0733
electrically signaling cell2.12e-0733

Uber anatomy
Ontology termp-valuen
neurectoderm9.89e-2664
neural plate9.89e-2664
presumptive neural plate9.89e-2664
regional part of nervous system1.07e-2454
central nervous system1.71e-2373
neural tube5.19e-2352
neural rod5.19e-2352
future spinal cord5.19e-2352
neural keel5.19e-2352
ecto-epithelium3.63e-2273
nervous system4.58e-2275
ectoderm-derived structure2.04e-1995
ectoderm2.04e-1995
presumptive ectoderm2.04e-1995
brain3.42e-1947
future brain3.42e-1947
pre-chordal neural plate1.30e-1849
regional part of brain1.79e-1846
anterior neural tube7.40e-1740
regional part of forebrain4.23e-1639
forebrain4.23e-1639
future forebrain4.23e-1639
gray matter3.94e-1334
structure with developmental contribution from neural crest2.33e-1292
brain grey matter9.69e-1029
regional part of telencephalon9.69e-1029
telencephalon9.69e-1029
diencephalon5.56e-0810
future diencephalon5.56e-0810
regional part of cerebral cortex1.15e-0717
posterior neural tube8.09e-0712
chordal neural plate8.09e-0712
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