FFCP PHASE1:Mm9::chr9:60560912..60560966,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=67557|HGNC=|MCL_coexpression_id=1|UniProt=Q8BN59|association_with_transcript=0bp_to_NM_026235,uc009pzh.1_5end|description=CAGE_peak_1_at_Larp6_5end|id=chr9:60560912..60560966,+|ontology_enrichment_celltype=CL:0000117!2.43e-09!23;CL:0000337!2.43e-09!23;CL:0000393!2.25e-08!39;CL:0000211!2.25e-08!39;CL:0000055!2.31e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.22e-09,23;CL:0000337,1.22e-09,23;CL:0000393,1.26e-08,39;CL:0000211,1.26e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.13e-20!73;UBERON:0005743!1.13e-20!73;UBERON:0004121!3.71e-20!102;UBERON:0000924!3.71e-20!102;UBERON:0006601!3.71e-20!102;UBERON:0000073!5.75e-20!75;UBERON:0001016!5.75e-20!75;UBERON:0001049!5.97e-20!52;UBERON:0005068!5.97e-20!52;UBERON:0006241!5.97e-20!52;UBERON:0007135!5.97e-20!52;UBERON:0000033!2.89e-19!63;UBERON:0002346!7.71e-19!71;UBERON:0003075!7.71e-19!71;UBERON:0007284!7.71e-19!71;UBERON:0000955!9.67e-19!50;UBERON:0006238!9.67e-19!50;UBERON:0002616!3.36e-18!49;UBERON:0003056!9.15e-16!49;UBERON:0003080!1.97e-14!40;UBERON:0002020!3.26e-14!34;UBERON:0002780!7.26e-14!39;UBERON:0001890!7.26e-14!39;UBERON:0006240!7.26e-14!39;UBERON:0002791!3.05e-11!29;UBERON:0003528!3.05e-11!29;UBERON:0001893!3.05e-11!29;UBERON:0007811!1.65e-08!86;UBERON:0000153!2.76e-08!94;UBERON:0002619!5.57e-08!17;UBERON:0002021!1.28e-07!10;UBERON:0000411!1.28e-07!10;UBERON:0001950!1.28e-07!10;UBERON:0000956!3.65e-07!21;UBERON:0001869!3.65e-07!21;UBERON:0000203!3.65e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.23e-23,54;UBERON:0001017,9.36e-23,73;UBERON:0001016,5.86e-22,75;UBERON:0002346,6.41e-22,64;UBERON:0003075,6.41e-22,64;UBERON:0007284,6.41e-22,64;UBERON:0001049,9.19e-22,52;UBERON:0005068,9.19e-22,52;UBERON:0006241,9.19e-22,52;UBERON:0007135,9.19e-22,52;UBERON:0004121,2.55e-21,95;UBERON:0000924,2.55e-21,95;UBERON:0006601,2.55e-21,95;UBERON:0010371,1.99e-20,73;UBERON:0000955,3.50e-18,47;UBERON:0006238,3.50e-18,47;UBERON:0002616,1.35e-17,46;UBERON:0003056,2.19e-16,49;UBERON:0003080,2.49e-15,40;UBERON:0002020,4.79e-15,34;UBERON:0002780,1.05e-14,39;UBERON:0001890,1.05e-14,39;UBERON:0006240,1.05e-14,39;UBERON:0010314,5.51e-13,92;UBERON:0003528,9.19e-12,29;UBERON:0002791,9.19e-12,29;UBERON:0001893,9.19e-12,29;UBERON:0002619,9.65e-09,17;UBERON:0002021,2.45e-08,10;UBERON:0000411,2.45e-08,10;UBERON:0001950,2.45e-08,10;UBERON:0000956,2.81e-07,21;UBERON:0001869,2.81e-07,21;UBERON:0000203,2.81e-07,21;UBERON:0003076,3.29e-07,12;UBERON:0003057,3.29e-07,12|phase1_expression=1.28119077683835,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.656861476496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,9.69405498411945,8.11015449756117,7.34187008646726,7.82391344348039,0,1.09843091367236,1.55543919259427,4.33957907038624,0,0,0,0,4.63066984864705,5.44413535883638,3.6097046459421,8.49729135610311,11.6378015439847,5.07065122804943,8.4711133017283,8.00365316500025,1.7997994345628,0,1.4209602298922,5.09320187881288,6.53171119046643,0.414758449233911,0.945041568321835,1.05162480675691,20.5668708770739,20.0990372265968,1.5923803897944,2.20444583341944,3.67687514644008,20.9220173898839,20.0469120793745,17.9719643909805,6.85808696197008,8.96578907303615,7.8137005583514,21.7762739221077,15.1945904708554,15.4326230254578,18.2669722993674,15.0913981647049,8.20157561631323,0.227178579999552,1.43585964202892,0,0,0,0.539703191637817,0,0,2.52799956237153,0.681721290312231,0,1.7666978725517,0.845060518660083,0,0,0,0,0,0,0.5709193985953,1.8125651855302,3.41416919849097,0.346970653532272,1.21786191324856,0.461230994512117,0.452167921657868,1.05829836422134,1.50799909595611,0.494389935468748,2.16899035379867,1.76922110389975,2.26473589926373,1.54589062922275,1.45462575940567,0,14.0534782565543,15.0801628905688,0.510914110417183,0,0,0,15.4284358586967,15.5550204958333,10.6806199295935,12.6891753740362,21.9915293304084,17.6619837875626,23.3627418817571,3.97173519016234,3.73220911830279,0.758168275301024,1.05220927943237,0.910843100738926,2.5289231487682,2.16074555766419,2.56198190320716,3.6739709541717,3.58718416797579,3.18585863503078,4.39795730256327,0.215567992932842,0.567318240503458,0.351902248327898,1.53437012699302,1.66828349535359,1.74126083261083,3.2925141825271,1.39323986772945,0,0,0,0.207125772535502,0,0.36012412292203,0,0,0.771335564436891,0.465067889500816,0.268273401399619,0.467061369468678,0.658239399653922,0.656669856316381,0.729619285912702,0.877199924551994,1.97595103761946,1.61047702512446,15.5614561937454,3.91037527041281,0,0.264450566663544,0.426576501070468,0.232236671860439,1.67527699718721,1.4117846723634,0.889512175379481,1.14135375667535,0.474529061544512,0.823494773620054,1.75934646160189,1.1937388322469,0.974820435595601,1.79763881730844,0.864552199498777,0.995706366271836,0.569003702859245,0.228497025219458,1.1270773567308,1.22190796707189,0.775809948670503,1.19230893813542,1.58091342810643,1.62371162777562,0.784993639206874,1.48076596706161,0,0.333690211432188,0.196558995113203,0.449724224769707,0.202860121388503,0,0,0,0,0.274561413188081,0,0,0,0,0,0,2.40179147216586,0.37898282354097,0.814824882210129,0.169745085775188,0.469380496577004,0.502518772325447,0.476087281772027,1.75620283072019,1.10344600874334,0.44292937929755,2.39182152986231,2.13022309130459,1.72684981865896,0.578596234326046,0,0,0.983528546038072,1.93155722413313,16.5367107687426,16.5268478095006,0.655739781506702,0.757412781613119,1.89304931649754,0.390438744296638,1.07711698866399,0,0.891194696329576,0,0.404810701674894,1.75353514746787,1.58115111178609,9.63963949265421,1.84522110770749,3.20518086601059,4.23506094319298,4.12425307431339,2.65490276679926,1.45668381692989,0.604647113929502,0.565815239267694,0.885905678642318,1.53717573971964,1.80899805217755,2.54473610634254,0.356497378384721,0.632073515871632,1.05418608574999,0,7.14923172082955,1.08036656418786,2.19909762430683,1.92903331528433,2.30542303734956,3.0322698992352,2.63278432963394,5.78483403317739,3.75474732901937,1.90648863777438,0.661585194164886,3.95727007059552,2.26050197374268,0.72375509913787,1.67121281604391,1.64140899745061,1.45740418314925,15.7611506708933,0.170870880797853,0.82554747185289,0.185194527369712,0,0.136694227721025,0.457556346413045,0.339956859987711,1.25956307091292,0.829199842826543,0.954670618015114,0.632671987162271,1.21991680276109,0.648032044930808,0.627264888043406,1.52853794622324,0.944050424693745,1.73572257023205,0.785267825952089,1.29614973291793,1.24267862617385,0.56369293868419,0.448549638131936,0.827292452285488,1.55560950675238,3.22899558694328,1.520605129417,1.17357238645754,0.651021924219751,0.943734099831398,0.724752362478018,1.15212002503146,0.632022241256357,1.41907650703115,0.718976700153791,0.51968329191118,0,0.79472541912506,0.600977247599844,0.443068581523732,0.403865799792591,0.381034033274999,0.604957110821043,0.487289403698762,0.288635524920988,0.584384510907845,0.906921534460845,0,0,0,2.70465431645067,6.94425159169373,4.94509385521616,1.92931541171159,0.501572104035363,16.942555278512,17.4923589872727,20.6242384838183,12.5452823110892,22.6077231524312,17.3740596399631,20.925697507186,18.0128481289688,18.1256963593682,13.9795284172991,0.31136204275253,1.19707462020309,2.56100408631201,3.16038732188782,3.14419743941973,3.49302666055027,2.44471400581777,3.29656091582231,5.13470735346904,3.28506375292937,1.77435509923168,1.32038438970253,2.34103768674706,2.30490548657529,1.78049953762401,2.85776214769844,2.0859178670074,3.08654752741928,1.23625770240992,3.38557516309114,2.05721551431249,2.12970967391205,2.62279808942053,2.90692833264657,1.88218760830661,2.36920902096694,3.84148743032822,2.10455769150274,2.71608227691724,1.12228454331548,2.84724043498018,1.97008964751127,1.22769312950907,2.32405261778949,3.47231899766054,4.24677982494508,2.33931608445408,3.00819475667618,3.06061331310149,2.8676884485537,3.01428186306548|short_description=p1@Larp6}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:67557 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BN59 | |||
|association_with_transcript=0bp_to_NM_026235,uc009pzh.1_5end | |||
|cluster_id=chr9:60560912..60560966,+ | |||
|description=CAGE_peak_1_at_Larp6_5end | |||
|id=chr9:60560912..60560966,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.43e-09!23;CL:0000337!2.43e-09!23;CL:0000393!2.25e-08!39;CL:0000211!2.25e-08!39;CL:0000055!2.31e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.22e-09,23;CL:0000337,1.22e-09,23;CL:0000393,1.26e-08,39;CL:0000211,1.26e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.13e-20!73;UBERON:0005743!1.13e-20!73;UBERON:0004121!3.71e-20!102;UBERON:0000924!3.71e-20!102;UBERON:0006601!3.71e-20!102;UBERON:0000073!5.75e-20!75;UBERON:0001016!5.75e-20!75;UBERON:0001049!5.97e-20!52;UBERON:0005068!5.97e-20!52;UBERON:0006241!5.97e-20!52;UBERON:0007135!5.97e-20!52;UBERON:0000033!2.89e-19!63;UBERON:0002346!7.71e-19!71;UBERON:0003075!7.71e-19!71;UBERON:0007284!7.71e-19!71;UBERON:0000955!9.67e-19!50;UBERON:0006238!9.67e-19!50;UBERON:0002616!3.36e-18!49;UBERON:0003056!9.15e-16!49;UBERON:0003080!1.97e-14!40;UBERON:0002020!3.26e-14!34;UBERON:0002780!7.26e-14!39;UBERON:0001890!7.26e-14!39;UBERON:0006240!7.26e-14!39;UBERON:0002791!3.05e-11!29;UBERON:0003528!3.05e-11!29;UBERON:0001893!3.05e-11!29;UBERON:0007811!1.65e-08!86;UBERON:0000153!2.76e-08!94;UBERON:0002619!5.57e-08!17;UBERON:0002021!1.28e-07!10;UBERON:0000411!1.28e-07!10;UBERON:0001950!1.28e-07!10;UBERON:0000956!3.65e-07!21;UBERON:0001869!3.65e-07!21;UBERON:0000203!3.65e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.23e-23,54;UBERON:0001017,9.36e-23,73;UBERON:0001016,5.86e-22,75;UBERON:0002346,6.41e-22,64;UBERON:0003075,6.41e-22,64;UBERON:0007284,6.41e-22,64;UBERON:0001049,9.19e-22,52;UBERON:0005068,9.19e-22,52;UBERON:0006241,9.19e-22,52;UBERON:0007135,9.19e-22,52;UBERON:0004121,2.55e-21,95;UBERON:0000924,2.55e-21,95;UBERON:0006601,2.55e-21,95;UBERON:0010371,1.99e-20,73;UBERON:0000955,3.50e-18,47;UBERON:0006238,3.50e-18,47;UBERON:0002616,1.35e-17,46;UBERON:0003056,2.19e-16,49;UBERON:0003080,2.49e-15,40;UBERON:0002020,4.79e-15,34;UBERON:0002780,1.05e-14,39;UBERON:0001890,1.05e-14,39;UBERON:0006240,1.05e-14,39;UBERON:0010314,5.51e-13,92;UBERON:0003528,9.19e-12,29;UBERON:0002791,9.19e-12,29;UBERON:0001893,9.19e-12,29;UBERON:0002619,9.65e-09,17;UBERON:0002021,2.45e-08,10;UBERON:0000411,2.45e-08,10;UBERON:0001950,2.45e-08,10;UBERON:0000956,2.81e-07,21;UBERON:0001869,2.81e-07,21;UBERON:0000203,2.81e-07,21;UBERON:0003076,3.29e-07,12;UBERON:0003057,3.29e-07,12 | |||
|phase1_expression=1.28119077683835,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.656861476496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,9.69405498411945,8.11015449756117,7.34187008646726,7.82391344348039,0,1.09843091367236,1.55543919259427,4.33957907038624,0,0,0,0,4.63066984864705,5.44413535883638,3.6097046459421,8.49729135610311,11.6378015439847,5.07065122804943,8.4711133017283,8.00365316500025,1.7997994345628,0,1.4209602298922,5.09320187881288,6.53171119046643,0.414758449233911,0.945041568321835,1.05162480675691,20.5668708770739,20.0990372265968,1.5923803897944,2.20444583341944,3.67687514644008,20.9220173898839,20.0469120793745,17.9719643909805,6.85808696197008,8.96578907303615,7.8137005583514,21.7762739221077,15.1945904708554,15.4326230254578,18.2669722993674,15.0913981647049,8.20157561631323,0.227178579999552,1.43585964202892,0,0,0,0.539703191637817,0,0,2.52799956237153,0.681721290312231,0,1.7666978725517,0.845060518660083,0,0,0,0,0,0,0.5709193985953,1.8125651855302,3.41416919849097,0.346970653532272,1.21786191324856,0.461230994512117,0.452167921657868,1.05829836422134,1.50799909595611,0.494389935468748,2.16899035379867,1.76922110389975,2.26473589926373,1.54589062922275,1.45462575940567,0,14.0534782565543,15.0801628905688,0.510914110417183,0,0,0,15.4284358586967,15.5550204958333,10.6806199295935,12.6891753740362,21.9915293304084,17.6619837875626,23.3627418817571,3.97173519016234,3.73220911830279,0.758168275301024,1.05220927943237,0.910843100738926,2.5289231487682,2.16074555766419,2.56198190320716,3.6739709541717,3.58718416797579,3.18585863503078,4.39795730256327,0.215567992932842,0.567318240503458,0.351902248327898,1.53437012699302,1.66828349535359,1.74126083261083,3.2925141825271,1.39323986772945,0,0,0,0.207125772535502,0,0.36012412292203,0,0,0.771335564436891,0.465067889500816,0.268273401399619,0.467061369468678,0.658239399653922,0.656669856316381,0.729619285912702,0.877199924551994,1.97595103761946,1.61047702512446,15.5614561937454,3.91037527041281,0,0.264450566663544,0.426576501070468,0.232236671860439,1.67527699718721,1.4117846723634,0.889512175379481,1.14135375667535,0.474529061544512,0.823494773620054,1.75934646160189,1.1937388322469,0.974820435595601,1.79763881730844,0.864552199498777,0.995706366271836,0.569003702859245,0.228497025219458,1.1270773567308,1.22190796707189,0.775809948670503,1.19230893813542,1.58091342810643,1.62371162777562,0.784993639206874,1.48076596706161,0,0.333690211432188,0.196558995113203,0.449724224769707,0.202860121388503,0,0,0,0,0.274561413188081,0,0,0,0,0,0,2.40179147216586,0.37898282354097,0.814824882210129,0.169745085775188,0.469380496577004,0.502518772325447,0.476087281772027,1.75620283072019,1.10344600874334,0.44292937929755,2.39182152986231,2.13022309130459,1.72684981865896,0.578596234326046,0,0,0.983528546038072,1.93155722413313,16.5367107687426,16.5268478095006,0.655739781506702,0.757412781613119,1.89304931649754,0.390438744296638,1.07711698866399,0,0.891194696329576,0,0.404810701674894,1.75353514746787,1.58115111178609,9.63963949265421,1.84522110770749,3.20518086601059,4.23506094319298,4.12425307431339,2.65490276679926,1.45668381692989,0.604647113929502,0.565815239267694,0.885905678642318,1.53717573971964,1.80899805217755,2.54473610634254,0.356497378384721,0.632073515871632,1.05418608574999,0,7.14923172082955,1.08036656418786,2.19909762430683,1.92903331528433,2.30542303734956,3.0322698992352,2.63278432963394,5.78483403317739,3.75474732901937,1.90648863777438,0.661585194164886,3.95727007059552,2.26050197374268,0.72375509913787,1.67121281604391,1.64140899745061,1.45740418314925,15.7611506708933,0.170870880797853,0.82554747185289,0.185194527369712,0,0.136694227721025,0.457556346413045,0.339956859987711,1.25956307091292,0.829199842826543,0.954670618015114,0.632671987162271,1.21991680276109,0.648032044930808,0.627264888043406,1.52853794622324,0.944050424693745,1.73572257023205,0.785267825952089,1.29614973291793,1.24267862617385,0.56369293868419,0.448549638131936,0.827292452285488,1.55560950675238,3.22899558694328,1.520605129417,1.17357238645754,0.651021924219751,0.943734099831398,0.724752362478018,1.15212002503146,0.632022241256357,1.41907650703115,0.718976700153791,0.51968329191118,0,0.79472541912506,0.600977247599844,0.443068581523732,0.403865799792591,0.381034033274999,0.604957110821043,0.487289403698762,0.288635524920988,0.584384510907845,0.906921534460845,0,0,0,2.70465431645067,6.94425159169373,4.94509385521616,1.92931541171159,0.501572104035363,16.942555278512,17.4923589872727,20.6242384838183,12.5452823110892,22.6077231524312,17.3740596399631,20.925697507186,18.0128481289688,18.1256963593682,13.9795284172991,0.31136204275253,1.19707462020309,2.56100408631201,3.16038732188782,3.14419743941973,3.49302666055027,2.44471400581777,3.29656091582231,5.13470735346904,3.28506375292937,1.77435509923168,1.32038438970253,2.34103768674706,2.30490548657529,1.78049953762401,2.85776214769844,2.0859178670074,3.08654752741928,1.23625770240992,3.38557516309114,2.05721551431249,2.12970967391205,2.62279808942053,2.90692833264657,1.88218760830661,2.36920902096694,3.84148743032822,2.10455769150274,2.71608227691724,1.12228454331548,2.84724043498018,1.97008964751127,1.22769312950907,2.32405261778949,3.47231899766054,4.24677982494508,2.33931608445408,3.00819475667618,3.06061331310149,2.8676884485537,3.01428186306548 | |||
|short_description=p1@Larp6 | |||
}} |
Revision as of 10:33, 5 August 2015
Short description: | p1@Larp6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Larp6_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_NM_026235, uc009pzh.1_5end |
EntrezGene: | 67557 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.22e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.22e-09 | 23 |
electrically responsive cell | 1.26e-08 | 39 |
electrically active cell | 1.26e-08 | 39 |