FFCP PHASE1:Mm9::chr2:70499558..70499609,+: Difference between revisions
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{{FFCP|EntrezGene=70231|HGNC=|UniProt=A2ATI7,Q99JX3,A2ATI6,A2ATI9|association_with_transcript=0bp_to_NM_027352,NR_027343,uc008jzn.2,uc008jzo.2,uc008jzp.2_5end|description=CAGE_peak_2_at_Gorasp2_5end|id=chr2:70499558..70499609,+|ontology_enrichment_celltype=CL:0000055!4.59e-10!50;CL:0000117!6.43e-10!23;CL:0000337!6.43e-10!23;CL:0002319!7.67e-10!43;CL:0002321!9.44e-10!70;CL:0000220!9.44e-10!70;CL:0000221!1.84e-09!44;CL:0000133!1.84e-09!44|ontology_enrichment_celltype_v019_2=CL:0000117,6.43e-10,23;CL:0000337,6.43e-10,23;CL:0002319,7.67e-10,43;CL:0002321,9.44e-10,70;CL:0000221,1.84e-09,44;CL:0000133,1.84e-09,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!5.58e-16!75;UBERON:0001016!5.58e-16!75;UBERON:0001017!5.81e-15!73;UBERON:0005743!5.81e-15!73;UBERON:0001049!6.55e-14!52;UBERON:0005068!6.55e-14!52;UBERON:0006241!6.55e-14!52;UBERON:0007135!6.55e-14!52;UBERON:0002020!6.67e-14!34;UBERON:0000955!6.76e-12!50;UBERON:0006238!6.76e-12!50;UBERON:0002616!1.18e-11!49;UBERON:0002791!6.30e-11!29;UBERON:0003528!6.30e-11!29;UBERON:0001893!6.30e-11!29;UBERON:0003080!1.06e-10!40;UBERON:0002780!2.06e-10!39;UBERON:0001890!2.06e-10!39;UBERON:0006240!2.06e-10!39;UBERON:0004121!2.63e-10!102;UBERON:0000924!2.63e-10!102;UBERON:0006601!2.63e-10!102;UBERON:0000033!1.59e-07!63;UBERON:0002346!1.82e-07!71;UBERON:0003075!1.82e-07!71;UBERON:0007284!1.82e-07!71;UBERON:0000956!1.89e-07!21;UBERON:0001869!1.89e-07!21;UBERON:0000203!1.89e-07!21;UBERON:0003056!2.02e-07!49;UBERON:0002619!2.13e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.58e-16,75;UBERON:0001017,5.81e-15,73;UBERON:0000073,1.83e-14,54;UBERON:0001049,6.55e-14,52;UBERON:0005068,6.55e-14,52;UBERON:0006241,6.55e-14,52;UBERON:0007135,6.55e-14,52;UBERON:0002020,6.67e-14,34;UBERON:0004121,3.23e-12,95;UBERON:0000924,3.23e-12,95;UBERON:0006601,3.23e-12,95;UBERON:0000955,4.11e-11,47;UBERON:0006238,4.11e-11,47;UBERON:0003528,6.30e-11,29;UBERON:0002791,6.30e-11,29;UBERON:0001893,6.30e-11,29;UBERON:0002616,7.12e-11,46;UBERON:0003080,1.06e-10,40;UBERON:0002780,2.06e-10,39;UBERON:0001890,2.06e-10,39;UBERON:0006240,2.06e-10,39;UBERON:0002346,1.92e-09,64;UBERON:0003075,1.92e-09,64;UBERON:0007284,1.92e-09,64;UBERON:0010371,4.17e-09,73;UBERON:0000956,1.89e-07,21;UBERON:0001869,1.89e-07,21;UBERON:0000203,1.89e-07,21;UBERON:0003056,2.02e-07,49;UBERON:0002619,2.13e-07,17|phase1_expression=7.68714466103011,15.7038933437712,14.5599756604652,9.37639055051173,8.01433167914156,8.56184286750638,9.1108929832255,1.16210991097419,3.66050677594334,5.14941957908386,3.08192342805909,5.2649624936922,2.22560948910567,2.18551006047494,3.66420737997229,3.64455481301687,1.39912375625629,4.41647031501533,4.79900517620086,4.2438965179803,14.2872727453797,2.78014663362479,2.87319768052829,8.95957567643077,6.19405058881359,14.9300310669905,10.3382879078178,8.18790684206378,6.84084310042946,8.06496415231778,6.87364583031445,10.1604907753541,4.92051830067656,0,7.22129049378186,4.3221007793208,6.32925004413344,4.60384793810598,4.6880120671428,3.66466620781659,4.1176204162171,3.41522742479223,5.82612423637384,8.3091899863881,9.12392380975631,9.17733760808408,23.4717403304412,10.4652075062614,14.2796018777407,11.0825042472342,20.0180582924268,12.9377307928474,5.36904339384756,1.45072428402269,5.71359458542189,9.51859913333004,6.5902691185914,9.28209766099396,22.0524942336962,30.1524858185059,19.0149421051854,15.5868484751801,16.8966011261116,12.1486461832989,7.9109309005358,5.6838409195688,14.081205194365,8.4528027170742,9.64313394468842,7.1553147315796,8.2026734927039,17.424710048632,25.3998822094356,11.0241719293459,12.3640657613525,16.5459381589804,14.3150645299205,8.2996769755372,10.9060638611933,15.6944682398931,18.8464545820964,8.85552729946492,11.725685958058,17.4456409109821,11.1542720877071,17.3830865429464,17.6540884190888,17.7079473534036,17.1898458866328,14.1318817399689,5.50742528533188,7.74381489283248,14.9593693415705,6.47643829965381,5.84798775702902,10.3046184032387,6.46044332606059,9.37366774179318,8.3131521472918,8.48014978824817,6.33795388995062,14.115912515575,12.7402619853323,21.3320010945999,5.62876706629157,6.84071636782766,6.0662933401774,7.19358442230078,5.43769555659061,8.90652834388949,6.93941307064543,5.48037860961854,6.22661842591358,4.22023393547343,5.29149182110672,6.1576629751541,21.0115722574218,5.06097749219691,4.42305275974937,8.57364304721269,4.63767188766826,5.33362778448744,5.59175283654366,4.9772735491963,5.44561437714983,7.91916871146633,5.87094110079009,8.39863823390771,8.6407754409684,10.3355541189328,14.1825186873774,39.9580839718909,12.5153510538439,13.0414883238469,13.9217989854905,13.3037835715561,14.0538322113436,5.22509276562391,10.6143558542143,3.36706969418358,5.98554037628437,6.20735681970377,6.30217454318722,5.87748789559289,6.53150391852747,6.66191345481219,7.02762934197966,8.2785078636485,6.46703978798527,7.75334928688059,8.44565395986955,12.0557652835166,8.61946472599353,6.61679116392116,5.7618998194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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:70231 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2ATI7,uniprot:Q99JX3,uniprot:A2ATI6,uniprot:A2ATI9 | |||
|association_with_transcript=0bp_to_NM_027352,NR_027343,uc008jzn.2,uc008jzo.2,uc008jzp.2_5end | |||
|cluster_id=chr2:70499558..70499609,+ | |||
|description=CAGE_peak_2_at_Gorasp2_5end | |||
|id=chr2:70499558..70499609,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.59e-10!50;CL:0000117!6.43e-10!23;CL:0000337!6.43e-10!23;CL:0002319!7.67e-10!43;CL:0002321!9.44e-10!70;CL:0000220!9.44e-10!70;CL:0000221!1.84e-09!44;CL:0000133!1.84e-09!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.43e-10,23;CL:0000337,6.43e-10,23;CL:0002319,7.67e-10,43;CL:0002321,9.44e-10,70;CL:0000221,1.84e-09,44;CL:0000133,1.84e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.58e-16!75;UBERON:0001016!5.58e-16!75;UBERON:0001017!5.81e-15!73;UBERON:0005743!5.81e-15!73;UBERON:0001049!6.55e-14!52;UBERON:0005068!6.55e-14!52;UBERON:0006241!6.55e-14!52;UBERON:0007135!6.55e-14!52;UBERON:0002020!6.67e-14!34;UBERON:0000955!6.76e-12!50;UBERON:0006238!6.76e-12!50;UBERON:0002616!1.18e-11!49;UBERON:0002791!6.30e-11!29;UBERON:0003528!6.30e-11!29;UBERON:0001893!6.30e-11!29;UBERON:0003080!1.06e-10!40;UBERON:0002780!2.06e-10!39;UBERON:0001890!2.06e-10!39;UBERON:0006240!2.06e-10!39;UBERON:0004121!2.63e-10!102;UBERON:0000924!2.63e-10!102;UBERON:0006601!2.63e-10!102;UBERON:0000033!1.59e-07!63;UBERON:0002346!1.82e-07!71;UBERON:0003075!1.82e-07!71;UBERON:0007284!1.82e-07!71;UBERON:0000956!1.89e-07!21;UBERON:0001869!1.89e-07!21;UBERON:0000203!1.89e-07!21;UBERON:0003056!2.02e-07!49;UBERON:0002619!2.13e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.58e-16,75;UBERON:0001017,5.81e-15,73;UBERON:0000073,1.83e-14,54;UBERON:0001049,6.55e-14,52;UBERON:0005068,6.55e-14,52;UBERON:0006241,6.55e-14,52;UBERON:0007135,6.55e-14,52;UBERON:0002020,6.67e-14,34;UBERON:0004121,3.23e-12,95;UBERON:0000924,3.23e-12,95;UBERON:0006601,3.23e-12,95;UBERON:0000955,4.11e-11,47;UBERON:0006238,4.11e-11,47;UBERON:0003528,6.30e-11,29;UBERON:0002791,6.30e-11,29;UBERON:0001893,6.30e-11,29;UBERON:0002616,7.12e-11,46;UBERON:0003080,1.06e-10,40;UBERON:0002780,2.06e-10,39;UBERON:0001890,2.06e-10,39;UBERON:0006240,2.06e-10,39;UBERON:0002346,1.92e-09,64;UBERON:0003075,1.92e-09,64;UBERON:0007284,1.92e-09,64;UBERON:0010371,4.17e-09,73;UBERON:0000956,1.89e-07,21;UBERON:0001869,1.89e-07,21;UBERON:0000203,1.89e-07,21;UBERON:0003056,2.02e-07,49;UBERON:0002619,2.13e-07,17 | |||
|phase1_expression=7.68714466103011,15.7038933437712,14.5599756604652,9.37639055051173,8.01433167914156,8.56184286750638,9.1108929832255,1.16210991097419,3.66050677594334,5.14941957908386,3.08192342805909,5.2649624936922,2.22560948910567,2.18551006047494,3.66420737997229,3.64455481301687,1.39912375625629,4.41647031501533,4.79900517620086,4.2438965179803,14.2872727453797,2.78014663362479,2.87319768052829,8.95957567643077,6.19405058881359,14.9300310669905,10.3382879078178,8.18790684206378,6.84084310042946,8.06496415231778,6.87364583031445,10.1604907753541,4.92051830067656,0,7.22129049378186,4.3221007793208,6.32925004413344,4.60384793810598,4.6880120671428,3.66466620781659,4.1176204162171,3.41522742479223,5.82612423637384,8.3091899863881,9.12392380975631,9.17733760808408,23.4717403304412,10.4652075062614,14.2796018777407,11.0825042472342,20.0180582924268,12.9377307928474,5.36904339384756,1.45072428402269,5.71359458542189,9.51859913333004,6.5902691185914,9.28209766099396,22.0524942336962,30.1524858185059,19.0149421051854,15.5868484751801,16.8966011261116,12.1486461832989,7.9109309005358,5.6838409195688,14.081205194365,8.4528027170742,9.64313394468842,7.1553147315796,8.2026734927039,17.424710048632,25.3998822094356,11.0241719293459,12.3640657613525,16.5459381589804,14.3150645299205,8.2996769755372,10.9060638611933,15.6944682398931,18.8464545820964,8.85552729946492,11.725685958058,17.4456409109821,11.1542720877071,17.3830865429464,17.6540884190888,17.7079473534036,17.1898458866328,14.1318817399689,5.50742528533188,7.74381489283248,14.9593693415705,6.47643829965381,5.84798775702902,10.3046184032387,6.46044332606059,9.37366774179318,8.3131521472918,8.48014978824817,6.33795388995062,14.115912515575,12.7402619853323,21.3320010945999,5.62876706629157,6.84071636782766,6.0662933401774,7.19358442230078,5.43769555659061,8.90652834388949,6.93941307064543,5.48037860961854,6.22661842591358,4.22023393547343,5.29149182110672,6.1576629751541,21.0115722574218,5.06097749219691,4.42305275974937,8.57364304721269,4.63767188766826,5.33362778448744,5.59175283654366,4.9772735491963,5.44561437714983,7.91916871146633,5.87094110079009,8.39863823390771,8.6407754409684,10.3355541189328,14.1825186873774,39.9580839718909,12.5153510538439,13.0414883238469,13.9217989854905,13.3037835715561,14.0538322113436,5.22509276562391,10.6143558542143,3.36706969418358,5.98554037628437,6.20735681970377,6.30217454318722,5.87748789559289,6.53150391852747,6.66191345481219,7.02762934197966,8.2785078636485,6.46703978798527,7.75334928688059,8.44565395986955,12.0557652835166,8.61946472599353,6.61679116392116,5.76189981942242,6.96619933864726,6.31991868581911,9.77922047035918,5.11494298912067,8.49215667395558,7.03578179943289,6.30217215113552,7.81257627431194,5.90292695242211,4.9365476123961,6.27841650826101,3.21928081679543,6.18856314545998,5.75959474697182,5.08919138645195,6.08016071593918,4.09359964790931,4.61055242111206,5.90508242545636,11.3556572224629,15.6415010816512,9.58214470653014,9.78467096655114,7.67837701926842,5.34144345279009,7.98978260196979,7.46229041106367,8.67274370994994,9.70150693174052,5.21981967698963,11.3642278759568,6.53471542880701,7.95825888164603,7.99352757188393,8.98819408654222,6.91641759599022,8.36393347668342,9.293727146701,8.3401414205102,14.6520056375005,5.90588850751411,6.7883370508669,10.0995580642059,10.3075555512539,10.775540802511,8.32093257559286,10.488758933353,1.77871576252289,4.67166296005063,5.89676985339609,3.14806957338795,3.24576194221605,1.92941727801933,2.80088436959562,2.87696137450811,6.16113861745134,3.84385978463314,4.31304619582064,7.07067800570156,5.61667811606209,9.34541848404313,10.0462551572271,6.75420929908714,7.944387177164,8.33762211790133,6.84452901056509,7.29903868833309,6.33663670378956,6.03022526790537,5.71304738126433,8.00047956216975,8.35466263762812,9.08005227559977,9.08892181347676,5.73521601505083,5.69860440157455,7.08780387049407,9.04747703635634,6.52686820582452,3.44234991113325,4.96686143348518,11.2385412991454,10.5490517932983,10.1639666133539,3.7870639080656,5.04813151066011,6.63745865304285,7.10897212518236,5.4962823529087,4.45597348164788,7.64306633129848,6.07216052512342,8.18316402151673,8.69633111482352,9.96096080907602,7.52282451603824,11.0400674273698,13.845391545054,7.58862565673663,7.96470830039777,8.74010290157933,8.16273603804828,6.03536255218874,8.26845300066164,7.99331384654211,8.01127708821486,7.63420831902762,2.49548164869305,6.95280867458795,6.32511651449993,7.21948802737308,2.38307724027652,6.48219938512717,7.50280365939976,10.2881776815164,8.6896714484714,8.56170324489939,8.88564711251453,8.82948352432338,13.8456307757589,18.4293901651524,5.73373834942901,10.0580614294303,8.88054346827481,9.95163261314572,11.1016279922917,9.52017218521355,9.61886760878507,10.0129663085675,3.93003025835061,9.08102219038179,4.8150577116125,2.0720530270516,2.7338845544205,4.34678529092393,7.47905091972963,8.11718423477216,8.98299829728755,5.72802370809068,7.27572785236611,6.50622294805916,7.56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| |||
|short_description=p2@Gorasp2 | |||
}} |
Revision as of 09:56, 5 August 2015
Short description: | p2@Gorasp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gorasp2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_027352, NR_027343, uc008jzn.2, uc008jzo.2, uc008jzp.2_5end |
EntrezGene: | 70231 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.43e-10 | 23 |
neuroblast (sensu Vertebrata) | 6.43e-10 | 23 |
neural cell | 7.67e-10 | 43 |
embryonic cell | 9.44e-10 | 70 |
ectodermal cell | 1.84e-09 | 44 |
neurectodermal cell | 1.84e-09 | 44 |
Ontology term | p-value | n |
---|---|---|
nervous system | 5.58e-16 | 75 |
central nervous system | 5.81e-15 | 73 |
regional part of nervous system | 1.83e-14 | 54 |
neural tube | 6.55e-14 | 52 |
neural rod | 6.55e-14 | 52 |
future spinal cord | 6.55e-14 | 52 |
neural keel | 6.55e-14 | 52 |
gray matter | 6.67e-14 | 34 |
ectoderm-derived structure | 3.23e-12 | 95 |
ectoderm | 3.23e-12 | 95 |
presumptive ectoderm | 3.23e-12 | 95 |
brain | 4.11e-11 | 47 |
future brain | 4.11e-11 | 47 |
brain grey matter | 6.30e-11 | 29 |
regional part of telencephalon | 6.30e-11 | 29 |
telencephalon | 6.30e-11 | 29 |
regional part of brain | 7.12e-11 | 46 |
anterior neural tube | 1.06e-10 | 40 |
regional part of forebrain | 2.06e-10 | 39 |
forebrain | 2.06e-10 | 39 |
future forebrain | 2.06e-10 | 39 |
neurectoderm | 1.92e-09 | 64 |
neural plate | 1.92e-09 | 64 |
presumptive neural plate | 1.92e-09 | 64 |
ecto-epithelium | 4.17e-09 | 73 |
cerebral cortex | 1.89e-07 | 21 |
cerebral hemisphere | 1.89e-07 | 21 |
pallium | 1.89e-07 | 21 |
pre-chordal neural plate | 2.02e-07 | 49 |
regional part of cerebral cortex | 2.13e-07 | 17 |