FFCP PHASE1:Mm9::chr7:53356146..53356191,-: Difference between revisions
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{{FFCP|EntrezGene=16514|HGNC=|MCL_coexpression_id=3631|UniProt=|association_with_transcript=-12bp_to_NM_001204411_5end|description=CAGE_peak_3_at_Kcnj11_5end|id=chr7:53356146..53356191,-|ontology_enrichment_celltype=CL:0000117!1.28e-11!23;CL:0000337!1.28e-11!23|ontology_enrichment_celltype_v019_2=CL:0000117,2.72e-15,23;CL:0000337,2.72e-15,23;CL:0000540,9.72e-09,33;CL:0000047,9.72e-09,33;CL:0000031,9.72e-09,33;CL:0000404,9.72e-09,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!3.60e-21!63;UBERON:0001049!1.53e-20!52;UBERON:0005068!1.53e-20!52;UBERON:0006241!1.53e-20!52;UBERON:0007135!1.53e-20!52;UBERON:0000955!2.43e-20!50;UBERON:0006238!2.43e-20!50;UBERON:0002616!8.88e-20!49;UBERON:0003080!7.35e-17!40;UBERON:0003056!2.78e-16!49;UBERON:0002780!3.06e-16!39;UBERON:0001890!3.06e-16!39;UBERON:0006240!3.06e-16!39;UBERON:0002346!4.43e-16!71;UBERON:0003075!4.43e-16!71;UBERON:0007284!4.43e-16!71;UBERON:0001017!1.90e-15!73;UBERON:0005743!1.90e-15!73;UBERON:0002020!2.29e-14!34;UBERON:0000073!2.73e-14!75;UBERON:0001016!2.73e-14!75;UBERON:0002791!1.69e-12!29;UBERON:0003528!1.69e-12!29;UBERON:0001893!1.69e-12!29;UBERON:0004121!2.28e-12!102;UBERON:0000924!2.28e-12!102;UBERON:0006601!2.28e-12!102;UBERON:0000025!2.26e-10!114;UBERON:0007811!2.26e-10!86;UBERON:0004111!4.77e-10!122;UBERON:0000956!1.18e-08!21;UBERON:0001869!1.18e-08!21;UBERON:0000203!1.18e-08!21;UBERON:0000153!2.79e-08!94;UBERON:0003103!1.17e-07!43;UBERON:0007100!7.14e-07!18;UBERON:0000948!7.14e-07!18;UBERON:0005498!7.14e-07!18;UBERON:0004140!7.14e-07!18;UBERON:0009881!7.14e-07!18;UBERON:0004141!7.14e-07!18;UBERON:0003084!7.14e-07!18;UBERON:0007005!7.14e-07!18;UBERON:0004139!7.14e-07!18;UBERON:0004291!7.14e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.72e-32,54;UBERON:0010314,1.24e-30,92;UBERON:0001049,6.08e-30,52;UBERON:0005068,6.08e-30,52;UBERON:0006241,6.08e-30,52;UBERON:0007135,6.08e-30,52;UBERON:0000955,1.03e-27,47;UBERON:0006238,1.03e-27,47;UBERON:0002616,8.00e-27,46;UBERON:0001017,7.56e-26,73;UBERON:0001016,1.01e-24,75;UBERON:0003080,4.62e-24,40;UBERON:0002780,4.52e-23,39;UBERON:0001890,4.52e-23,39;UBERON:0006240,4.52e-23,39;UBERON:0002346,1.31e-21,64;UBERON:0003075,1.31e-21,64;UBERON:0007284,1.31e-21,64;UBERON:0002020,5.25e-21,34;UBERON:0003528,3.13e-19,29;UBERON:0002791,3.13e-19,29;UBERON:0001893,3.13e-19,29;UBERON:0000025,3.62e-19,114;UBERON:0004111,1.95e-18,122;UBERON:0010371,2.61e-18,73;UBERON:0004121,5.43e-18,95;UBERON:0000924,5.43e-18,95;UBERON:0006601,5.43e-18,95;UBERON:0003056,1.54e-17,49;UBERON:0000956,5.79e-13,21;UBERON:0001869,5.79e-13,21;UBERON:0000203,5.79e-13,21;UBERON:0007100,8.17e-12,18;UBERON:0000948,8.17e-12,18;UBERON:0005498,8.17e-12,18;UBERON:0004140,8.17e-12,18;UBERON:0009881,8.17e-12,18;UBERON:0004141,8.17e-12,18;UBERON:0003084,8.17e-12,18;UBERON:0007005,8.17e-12,18;UBERON:0004139,8.17e-12,18;UBERON:0004291,8.17e-12,18;UBERON:0002619,2.74e-09,17;UBERON:0002021,4.98e-09,10;UBERON:0000411,4.98e-09,10;UBERON:0001950,4.98e-09,10;UBERON:0004535,3.17e-08,23;UBERON:0001009,3.17e-08,23;UBERON:0002420,1.49e-07,8;UBERON:0007245,1.49e-07,8;UBERON:0010009,1.49e-07,8;UBERON:0010011,1.49e-07,8;UBERON:0000454,1.49e-07,8;UBERON:0003103,2.22e-07,43;UBERON:0000483,3.03e-07,174;UBERON:0000119,5.51e-07,176|phase1_expression=0.960893082628764,0,0,0,0,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0.297872853602656,0,0.47997726838022,0.45881856213434,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,1.05798195854407,2.53532561402472,0,0,0,0,0,0,0.384218305321555,5.70292867696627,4.59020190327748,5.04779907243317,2.85650984403804,1.98781686856452,0.979926393719632,1.62937300731002,5.51531271966013,4.40463523997555,5.10749352340751,6.45147439676223,1.45074916503213,2.10421580285542,2.08365348222704,7.2587579740359,6.19038871034848,3.51435969886663,1.76777151284201,1.70846016958924,0.931997229126503,0,0,0,0,0,0,0,0,1.68533304158102,0,0,0,2.39433813620357,0,0,0,0.649473123033642,1.52015919285059,1.01104889002957,0,0,0.29688427812965,0.346970653532272,0.608930956624282,0,0,0.117588707135705,0.125666591329675,0.247194967734374,0.86759614151947,0.884610551949874,0.323533699894818,0.441683036920787,2.90925151881133,0,5.85561594023094,7.74952815209784,0.255457055208591,0,0,0,5.09288173976397,5.49000723382352,1.13088916901578,5.73620256634512,7.41574826257959,4.98691306942944,5.67844420737152,0.101839363850316,0.497627882440372,0.252722758433675,0.420883711772948,0.390361328888111,0.229902104433473,0.180062129805349,0.452114453507145,0.476255494059295,0.2562274405697,0.655912071918102,0.517406741478031,0,0.189106080167819,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,1.44988040774851,2.57978665979206,1.80062061461015,1.65721314909647,4.32881309844288,5.09081472528348,7.67362017676346,5.09719462659276,5.7215017759913,5.10135534731789,4.59668899421467,5.99909190639332,6.57899943413995,9.6602050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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:16514 | |||
|HGNC= | |||
|MCL_coexpression_id=3631 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-12bp_to_NM_001204411_5end | |||
|cluster_id=chr7:53356146..53356191,- | |||
|description=CAGE_peak_3_at_Kcnj11_5end | |||
|id=chr7:53356146..53356191,- | |||
|ontology_enrichment_celltype=CL:0000117!1.28e-11!23;CL:0000337!1.28e-11!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.72e-15,23;CL:0000337,2.72e-15,23;CL:0000540,9.72e-09,33;CL:0000047,9.72e-09,33;CL:0000031,9.72e-09,33;CL:0000404,9.72e-09,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!3.60e-21!63;UBERON:0001049!1.53e-20!52;UBERON:0005068!1.53e-20!52;UBERON:0006241!1.53e-20!52;UBERON:0007135!1.53e-20!52;UBERON:0000955!2.43e-20!50;UBERON:0006238!2.43e-20!50;UBERON:0002616!8.88e-20!49;UBERON:0003080!7.35e-17!40;UBERON:0003056!2.78e-16!49;UBERON:0002780!3.06e-16!39;UBERON:0001890!3.06e-16!39;UBERON:0006240!3.06e-16!39;UBERON:0002346!4.43e-16!71;UBERON:0003075!4.43e-16!71;UBERON:0007284!4.43e-16!71;UBERON:0001017!1.90e-15!73;UBERON:0005743!1.90e-15!73;UBERON:0002020!2.29e-14!34;UBERON:0000073!2.73e-14!75;UBERON:0001016!2.73e-14!75;UBERON:0002791!1.69e-12!29;UBERON:0003528!1.69e-12!29;UBERON:0001893!1.69e-12!29;UBERON:0004121!2.28e-12!102;UBERON:0000924!2.28e-12!102;UBERON:0006601!2.28e-12!102;UBERON:0000025!2.26e-10!114;UBERON:0007811!2.26e-10!86;UBERON:0004111!4.77e-10!122;UBERON:0000956!1.18e-08!21;UBERON:0001869!1.18e-08!21;UBERON:0000203!1.18e-08!21;UBERON:0000153!2.79e-08!94;UBERON:0003103!1.17e-07!43;UBERON:0007100!7.14e-07!18;UBERON:0000948!7.14e-07!18;UBERON:0005498!7.14e-07!18;UBERON:0004140!7.14e-07!18;UBERON:0009881!7.14e-07!18;UBERON:0004141!7.14e-07!18;UBERON:0003084!7.14e-07!18;UBERON:0007005!7.14e-07!18;UBERON:0004139!7.14e-07!18;UBERON:0004291!7.14e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.72e-32,54;UBERON:0010314,1.24e-30,92;UBERON:0001049,6.08e-30,52;UBERON:0005068,6.08e-30,52;UBERON:0006241,6.08e-30,52;UBERON:0007135,6.08e-30,52;UBERON:0000955,1.03e-27,47;UBERON:0006238,1.03e-27,47;UBERON:0002616,8.00e-27,46;UBERON:0001017,7.56e-26,73;UBERON:0001016,1.01e-24,75;UBERON:0003080,4.62e-24,40;UBERON:0002780,4.52e-23,39;UBERON:0001890,4.52e-23,39;UBERON:0006240,4.52e-23,39;UBERON:0002346,1.31e-21,64;UBERON:0003075,1.31e-21,64;UBERON:0007284,1.31e-21,64;UBERON:0002020,5.25e-21,34;UBERON:0003528,3.13e-19,29;UBERON:0002791,3.13e-19,29;UBERON:0001893,3.13e-19,29;UBERON:0000025,3.62e-19,114;UBERON:0004111,1.95e-18,122;UBERON:0010371,2.61e-18,73;UBERON:0004121,5.43e-18,95;UBERON:0000924,5.43e-18,95;UBERON:0006601,5.43e-18,95;UBERON:0003056,1.54e-17,49;UBERON:0000956,5.79e-13,21;UBERON:0001869,5.79e-13,21;UBERON:0000203,5.79e-13,21;UBERON:0007100,8.17e-12,18;UBERON:0000948,8.17e-12,18;UBERON:0005498,8.17e-12,18;UBERON:0004140,8.17e-12,18;UBERON:0009881,8.17e-12,18;UBERON:0004141,8.17e-12,18;UBERON:0003084,8.17e-12,18;UBERON:0007005,8.17e-12,18;UBERON:0004139,8.17e-12,18;UBERON:0004291,8.17e-12,18;UBERON:0002619,2.74e-09,17;UBERON:0002021,4.98e-09,10;UBERON:0000411,4.98e-09,10;UBERON:0001950,4.98e-09,10;UBERON:0004535,3.17e-08,23;UBERON:0001009,3.17e-08,23;UBERON:0002420,1.49e-07,8;UBERON:0007245,1.49e-07,8;UBERON:0010009,1.49e-07,8;UBERON:0010011,1.49e-07,8;UBERON:0000454,1.49e-07,8;UBERON:0003103,2.22e-07,43;UBERON:0000483,3.03e-07,174;UBERON:0000119,5.51e-07,176 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0.297872853602656,0,0.47997726838022,0.45881856213434,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,1.05798195854407,2.53532561402472,0,0,0,0,0,0,0.384218305321555,5.70292867696627,4.59020190327748,5.04779907243317,2.85650984403804,1.98781686856452,0.979926393719632,1.62937300731002,5.51531271966013,4.40463523997555,5.10749352340751,6.45147439676223,1.45074916503213,2.10421580285542,2.08365348222704,7.2587579740359,6.19038871034848,3.51435969886663,1.76777151284201,1.70846016958924,0.931997229126503,0,0,0,0,0,0,0,0,1.68533304158102,0,0,0,2.39433813620357,0,0,0,0.649473123033642,1.52015919285059,1.01104889002957,0,0,0.29688427812965,0.346970653532272,0.608930956624282,0,0,0.117588707135705,0.125666591329675,0.247194967734374,0.86759614151947,0.884610551949874,0.323533699894818,0.441683036920787,2.90925151881133,0,5.85561594023094,7.74952815209784,0.255457055208591,0,0,0,5.09288173976397,5.49000723382352,1.13088916901578,5.73620256634512,7.41574826257959,4.98691306942944,5.67844420737152,0.101839363850316,0.497627882440372,0.252722758433675,0.420883711772948,0.390361328888111,0.229902104433473,0.180062129805349,0.452114453507145,0.476255494059295,0.2562274405697,0.655912071918102,0.517406741478031,0,0.189106080167819,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,1.44988040774851,2.57978665979206,1.80062061461015,1.65721314909647,4.32881309844288,5.09081472528348,7.67362017676346,5.09719462659276,5.7215017759913,5.10135534731789,4.59668899421467,5.99909190639332,6.57899943413995,9.66020507280623,10.0654814070279,4.83666881697493,2.57261530948211,0,0.264450566663544,0,0.232236671860439,0.38660238396628,0,0.22237804384487,0,0,0.164698954724011,0.502670417600539,0.397912944082302,0.38992817423824,0,0.216138049874694,0.796565093017469,0.189667900953082,0.228497025219458,0,0.203651327845314,0.387904974335251,0.420814919341911,0.505892296994058,0.442830443938806,0.31399745568275,0.616985819609003,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.339490171550376,0.234690248288502,0.167506257441816,0.238043640886014,0,0,0,0.159454768657487,0.491589944147214,0.345369963731791,0.578596234326046,0,0,0,0,5.29816946959713,7.501547941901,0,2.27223834483936,0,0,0,0,0,0,0,0,0,3.53453448063988,0.141940085208269,0.35613120733451,0,0.329940245945071,0,4.85561272309963,7.55808892411878,5.09233715340925,3.54362271456927,2.45948118355142,1.29214146584111,1.81766864738753,1.78248689192361,0.316036757935816,0,1.03135543248187,1.02131881726136,0.900305470156551,1.29358683782755,1.71469628025274,0.532020700926821,1.78368817602071,2.63278432963394,2.13125464380219,0,0,0,0.16488625294148,0,0.0603129249281559,0.238744688006273,0,0.291480836629851,5.37733375830478,0,0.412773735926445,0,0,0,0,0,0,0,0,0.632671987162271,1.21991680276109,0.972048067396211,0.209088296014469,1.52853794622324,1.48350781023303,0.826534557253359,0.785267825952089,0.259229946583586,0.621339313086926,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0.629156066554265,0.241584120826006,0.576060012515731,0,0.608175645870493,0.102710957164827,0,0,0.198681354781265,0,0.147689527174577,0.201932899896295,0,0,0,0.0962118416403295,0,1.36038230169127,0,0.0897138566094757,0,0,0,0,0,0,4.51801474093653,2.76195141904306,4.58316410751517,3.26521046453006,6.16574267793578,2.2661816921691,3.37511250115903,1.35096360967266,2.26571204492102,2.5888015587591,0.415149390336707,0,0.341467211508268,0.243106717068294,0.419226325255965,0,0.222246727801615,0,0.64183841918363,1.26348605881899,0,0.377252682772152,0.936415074698824,0.512201219238954,0.689225627467359,0,1.62238056322798,0,0.824171801606613,0.588795680537589,0.685738504770831,0.887379030796687,0.476872379894642,0.290692833264657,0.564656282491984,0.676916863133412,0.365855945745545,1.05227884575137,0.814824683075171,0,0.711810108745045,0.886540341380071,0.409231043169689,0.464810523557898,1.15743966588685,0.499621155875892,0.233931608445408,0.429742108096597,0.382576664137687,1.32354851471709,1.15933917810211 | |||
|short_description=p3@Kcnj11 | |||
}} |
Revision as of 09:31, 5 August 2015
Short description: | p3@Kcnj11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Kcnj11_5end |
Coexpression cluster: | MCL_coexpression_mm9:3631 |
Association with transcript: | -12bp_to_NM_001204411_5end |
EntrezGene: | 16514 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.72e-15 | 23 |
neuroblast (sensu Vertebrata) | 2.72e-15 | 23 |
neuron | 9.72e-09 | 33 |
neuronal stem cell | 9.72e-09 | 33 |
neuroblast | 9.72e-09 | 33 |
electrically signaling cell | 9.72e-09 | 33 |