FFCP PHASE1:Mm9::chr11:109287281..109287324,+: Difference between revisions
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{{FFCP|EntrezGene=13929|HGNC=|MCL_coexpression_id=0|UniProt=B1AT60|association_with_transcript=0bp_to_ENSMUST00000020929,ENSMUST00000125108_5end|description=CAGE_peak_1_at_Amz2_5end|id=chr11:109287281..109287324,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!4.89e-14!63;UBERON:0003056!8.16e-14!49;UBERON:0001049!1.36e-12!52;UBERON:0005068!1.36e-12!52;UBERON:0006241!1.36e-12!52;UBERON:0007135!1.36e-12!52;UBERON:0002346!5.08e-12!71;UBERON:0003075!5.08e-12!71;UBERON:0007284!5.08e-12!71;UBERON:0003080!2.61e-11!40;UBERON:0000955!5.20e-11!50;UBERON:0006238!5.20e-11!50;UBERON:0002780!5.25e-11!39;UBERON:0001890!5.25e-11!39;UBERON:0006240!5.25e-11!39;UBERON:0000153!7.65e-11!94;UBERON:0002616!1.25e-10!49;UBERON:0000468!1.27e-10!333;UBERON:0002020!5.52e-10!34;UBERON:0002791!2.81e-09!29;UBERON:0003528!2.81e-09!29;UBERON:0001893!2.81e-09!29;UBERON:0007811!2.94e-09!86;UBERON:0004121!1.66e-08!102;UBERON:0000924!1.66e-08!102;UBERON:0006601!1.66e-08!102;UBERON:0000956!6.94e-08!21;UBERON:0001869!6.94e-08!21;UBERON:0000203!6.94e-08!21;UBERON:0001017!1.78e-07!73;UBERON:0005743!1.78e-07!73;UBERON:0000922!2.46e-07!328;UBERON:0000073!5.71e-07!75;UBERON:0001016!5.71e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0003056,8.16e-14,49;UBERON:0002346,3.05e-13,64;UBERON:0003075,3.05e-13,64;UBERON:0007284,3.05e-13,64;UBERON:0010371,7.19e-13,73;UBERON:0001049,1.36e-12,52;UBERON:0005068,1.36e-12,52;UBERON:0006241,1.36e-12,52;UBERON:0007135,1.36e-12,52;UBERON:0010314,3.04e-12,92;UBERON:0000955,9.22e-12,47;UBERON:0006238,9.22e-12,47;UBERON:0000073,1.77e-11,54;UBERON:0002616,2.27e-11,46;UBERON:0003080,2.61e-11,40;UBERON:0002780,5.25e-11,39;UBERON:0001890,5.25e-11,39;UBERON:0006240,5.25e-11,39;UBERON:0002020,5.52e-10,34;UBERON:0003528,2.81e-09,29;UBERON:0002791,2.81e-09,29;UBERON:0001893,2.81e-09,29;UBERON:0004121,4.48e-09,95;UBERON:0000924,4.48e-09,95;UBERON:0006601,4.48e-09,95;UBERON:0000956,6.94e-08,21;UBERON:0001869,6.94e-08,21;UBERON:0000203,6.94e-08,21;UBERON:0001017,1.78e-07,73;UBERON:0001016,5.71e-07,75|phase1_expression=28.0260482433389,1.74487703819681,4.09499315450582,3.93203474698879,1.00179145989269,2.68606835059024,3.50418960893289,8.13476937681931,6.61706994112834,10.5329036844897,20.0325022823841,13.8005835061932,10.6144452557348,10.7527094975367,5.66286595086627,8.09901069559304,5.59649502502517,4.10100814965709,4.38766187538364,3.39511721438424,118.46530318044,2.38298282882125,2.61199789138935,4.63978026100879,5.04700418347774,2.29692785646008,1.7230479846363,5.38678081714723,8.36103045608045,7.81293402255785,4.21287970245079,6.35030673459631,4.92051830067656,0,13.8648777480612,15.6260566636983,13.4751775133164,7.53356935326434,7.0320181007142,10.470474879476,5.88231488031014,6.14740936462601,7.2826552954673,6.54663453473002,8.61703915365874,7.52541683862894,5.47673941043627,12.6454590700659,10.7646229539891,10.8880743481599,10.9189408867783,11.5002051491977,3.18786951509699,12.3311564141929,1.68046899571232,7.97504251711436,10.3152038377952,6.70373719960675,62.7181028664753,68.7688273053643,49.438849473482,8.4711133017283,6.22506357277798,4.04954872776629,6.92206453796882,2.8419204597844,3.29560121570245,6.53171119046643,55.6813218096525,51.9772862577009,58.890989178387,16.8534080798244,20.7616428494517,62.4703075996266,62.4912471038901,56.9915647698213,14.3150645299205,18.5146640223522,22.5801603886678,68.3170970442404,67.4263933349759,68.2396515429356,20.6595419261022,9.00420176050688,18.0301932376636,32.1145158166298,39.8640706237488,56.6654315308914,10.9045718399785,16.0211707426385,17.971598299504,16.3480536626463,5.439770669662,12.4131734076698,13.6453047664011,14.7848872742121,40.5884374180763,10.9075406449957,10.1316541795119,8.48014978824817,20.8448261269487,7.69958864485907,5.09610479413291,0,7.57718643539249,8.36087556067825,9.0994400102661,26.71902785426,11.1343289968284,17.2192881315197,18.9099006175088,15.8322048722313,19.832932764021,20.0461111934988,20.4604350416126,23.7509857613087,10.1349936771093,40.6324192944952,26.5383165584962,31.5445357397448,26.2801406967868,28.1227646818429,20.5030937339934,33.6697916563279,35.1870467446604,18.13745091981,2.75574786363617,0.599902730993408,1.52484272487678,31.7556155538224,39.8025524452205,101.151753450856,36.8507558807626,31.1972857943003,31.5837827730531,30.3391161936707,21.3862664085664,23.7617313865278,25.0195530849338,32.8289295182899,27.8457747940186,25.289231487682,34.9320531822378,33.7578791952002,26.6703076673205,32.6689986726367,32.6082001467856,34.6662516790281,29.1016790459337,32.9044579492006,35.7180782052816,35.2905129208395,30.8632446640414,32.7357036530837,26.1343313238088,19.3063238813938,4.21327912387941,3.08817488537658,2.27330799516474,11.8061690345236,11.9608290590359,19.0865785148676,18.2293446400612,22.8246508826988,19.4376562238097,19.9979192485351,21.7301455133692,20.9009962837233,28.3042941851186,37.5943492741128,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13929 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:B1AT60 | |||
|association_with_transcript=0bp_to_ENSMUST00000020929,ENSMUST00000125108_5end | |||
|cluster_id=chr11:109287281..109287324,+ | |||
|description=CAGE_peak_1_at_Amz2_5end | |||
|id=chr11:109287281..109287324,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!4.89e-14!63;UBERON:0003056!8.16e-14!49;UBERON:0001049!1.36e-12!52;UBERON:0005068!1.36e-12!52;UBERON:0006241!1.36e-12!52;UBERON:0007135!1.36e-12!52;UBERON:0002346!5.08e-12!71;UBERON:0003075!5.08e-12!71;UBERON:0007284!5.08e-12!71;UBERON:0003080!2.61e-11!40;UBERON:0000955!5.20e-11!50;UBERON:0006238!5.20e-11!50;UBERON:0002780!5.25e-11!39;UBERON:0001890!5.25e-11!39;UBERON:0006240!5.25e-11!39;UBERON:0000153!7.65e-11!94;UBERON:0002616!1.25e-10!49;UBERON:0000468!1.27e-10!333;UBERON:0002020!5.52e-10!34;UBERON:0002791!2.81e-09!29;UBERON:0003528!2.81e-09!29;UBERON:0001893!2.81e-09!29;UBERON:0007811!2.94e-09!86;UBERON:0004121!1.66e-08!102;UBERON:0000924!1.66e-08!102;UBERON:0006601!1.66e-08!102;UBERON:0000956!6.94e-08!21;UBERON:0001869!6.94e-08!21;UBERON:0000203!6.94e-08!21;UBERON:0001017!1.78e-07!73;UBERON:0005743!1.78e-07!73;UBERON:0000922!2.46e-07!328;UBERON:0000073!5.71e-07!75;UBERON:0001016!5.71e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,8.16e-14,49;UBERON:0002346,3.05e-13,64;UBERON:0003075,3.05e-13,64;UBERON:0007284,3.05e-13,64;UBERON:0010371,7.19e-13,73;UBERON:0001049,1.36e-12,52;UBERON:0005068,1.36e-12,52;UBERON:0006241,1.36e-12,52;UBERON:0007135,1.36e-12,52;UBERON:0010314,3.04e-12,92;UBERON:0000955,9.22e-12,47;UBERON:0006238,9.22e-12,47;UBERON:0000073,1.77e-11,54;UBERON:0002616,2.27e-11,46;UBERON:0003080,2.61e-11,40;UBERON:0002780,5.25e-11,39;UBERON:0001890,5.25e-11,39;UBERON:0006240,5.25e-11,39;UBERON:0002020,5.52e-10,34;UBERON:0003528,2.81e-09,29;UBERON:0002791,2.81e-09,29;UBERON:0001893,2.81e-09,29;UBERON:0004121,4.48e-09,95;UBERON:0000924,4.48e-09,95;UBERON:0006601,4.48e-09,95;UBERON:0000956,6.94e-08,21;UBERON:0001869,6.94e-08,21;UBERON:0000203,6.94e-08,21;UBERON:0001017,1.78e-07,73;UBERON:0001016,5.71e-07,75 | |||
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| |||
|short_description=p1@Amz2 | |||
}} |
Revision as of 09:05, 5 August 2015
Short description: | p1@Amz2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Amz2_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000020929, ENSMUST00000125108_5end |
EntrezGene: | 13929 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 8.16e-14 | 49 |
neurectoderm | 3.05e-13 | 64 |
neural plate | 3.05e-13 | 64 |
presumptive neural plate | 3.05e-13 | 64 |
ecto-epithelium | 7.19e-13 | 73 |
neural tube | 1.36e-12 | 52 |
neural rod | 1.36e-12 | 52 |
future spinal cord | 1.36e-12 | 52 |
neural keel | 1.36e-12 | 52 |
structure with developmental contribution from neural crest | 3.04e-12 | 92 |
brain | 9.22e-12 | 47 |
future brain | 9.22e-12 | 47 |
regional part of nervous system | 1.77e-11 | 54 |
regional part of brain | 2.27e-11 | 46 |
anterior neural tube | 2.61e-11 | 40 |
regional part of forebrain | 5.25e-11 | 39 |
forebrain | 5.25e-11 | 39 |
future forebrain | 5.25e-11 | 39 |
gray matter | 5.52e-10 | 34 |
brain grey matter | 2.81e-09 | 29 |
regional part of telencephalon | 2.81e-09 | 29 |
telencephalon | 2.81e-09 | 29 |
ectoderm-derived structure | 4.48e-09 | 95 |
ectoderm | 4.48e-09 | 95 |
presumptive ectoderm | 4.48e-09 | 95 |
cerebral cortex | 6.94e-08 | 21 |
cerebral hemisphere | 6.94e-08 | 21 |
pallium | 6.94e-08 | 21 |
central nervous system | 1.78e-07 | 73 |
nervous system | 5.71e-07 | 75 |