FFCP PHASE1:Mm9::chr1:177422615..177422669,-: Difference between revisions
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{{FFCP|EntrezGene=24012|HGNC=|MCL_coexpression_id=1|UniProt=Q80XD3,O54829|association_with_transcript=6bp_to_NM_001199003,NM_011880,uc007dtk.2,uc007dtl.2_5end|description=CAGE_peak_1_at_Rgs7_5end|id=chr1:177422615..177422669,-|ontology_enrichment_celltype=CL:0000117!1.21e-10!23;CL:0000337!1.21e-10!23;CL:0000540!1.74e-10!33;CL:0000047!1.74e-10!33;CL:0000031!1.74e-10!33;CL:0000404!1.74e-10!33;CL:0000221!2.00e-09!44;CL:0000133!2.00e-09!44;CL:0002319!2.37e-09!43;CL:0000393!4.22e-07!39;CL:0000211!4.22e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.13e-12,23;CL:0000337,1.13e-12,23;CL:0000540,2.41e-11,33;CL:0000047,2.41e-11,33;CL:0000031,2.41e-11,33;CL:0000404,2.41e-11,33;CL:0000221,1.23e-09,44;CL:0000133,1.23e-09,44;CL:0002319,1.54e-09,43;CL:0000393,6.01e-08,39;CL:0000211,6.01e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.09e-27!102;UBERON:0000924!2.09e-27!102;UBERON:0006601!2.09e-27!102;UBERON:0002346!8.47e-27!71;UBERON:0003075!8.47e-27!71;UBERON:0007284!8.47e-27!71;UBERON:0000073!2.19e-26!75;UBERON:0001016!2.19e-26!75;UBERON:0001017!2.67e-26!73;UBERON:0005743!2.67e-26!73;UBERON:0001049!9.03e-23!52;UBERON:0005068!9.03e-23!52;UBERON:0006241!9.03e-23!52;UBERON:0007135!9.03e-23!52;UBERON:0000955!6.62e-22!50;UBERON:0006238!6.62e-22!50;UBERON:0000033!7.32e-22!63;UBERON:0002616!2.92e-21!49;UBERON:0003056!2.75e-18!49;UBERON:0003080!1.50e-17!40;UBERON:0002780!6.46e-17!39;UBERON:0001890!6.46e-17!39;UBERON:0006240!6.46e-17!39;UBERON:0002020!1.17e-16!34;UBERON:0002791!5.10e-14!29;UBERON:0003528!5.10e-14!29;UBERON:0001893!5.10e-14!29;UBERON:0000956!8.42e-10!21;UBERON:0001869!8.42e-10!21;UBERON:0000203!8.42e-10!21;UBERON:0002619!4.50e-09!17;UBERON:0007811!6.16e-09!86;UBERON:0002021!3.86e-08!10;UBERON:0000411!3.86e-08!10;UBERON:0001950!3.86e-08!10;UBERON:0000468!1.27e-07!333;UBERON:0000153!2.57e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.62e-29,75;UBERON:0001017,3.52e-29,73;UBERON:0002346,1.53e-28,64;UBERON:0003075,1.53e-28,64;UBERON:0007284,1.53e-28,64;UBERON:0000073,2.02e-28,54;UBERON:0001049,9.03e-27,52;UBERON:0005068,9.03e-27,52;UBERON:0006241,9.03e-27,52;UBERON:0007135,9.03e-27,52;UBERON:0004121,9.32e-27,95;UBERON:0000924,9.32e-27,95;UBERON:0006601,9.32e-27,95;UBERON:0010371,4.57e-25,73;UBERON:0010314,4.43e-24,92;UBERON:0000955,2.30e-23,47;UBERON:0006238,2.30e-23,47;UBERON:0002616,1.35e-22,46;UBERON:0003056,9.21e-21,49;UBERON:0003080,5.36e-20,40;UBERON:0002020,2.65e-19,34;UBERON:0002780,3.12e-19,39;UBERON:0001890,3.12e-19,39;UBERON:0006240,3.12e-19,39;UBERON:0003528,4.34e-16,29;UBERON:0002791,4.34e-16,29;UBERON:0001893,4.34e-16,29;UBERON:0000956,5.71e-11,21;UBERON:0001869,5.71e-11,21;UBERON:0000203,5.71e-11,21;UBERON:0002619,4.82e-10,17;UBERON:0002021,1.30e-09,10;UBERON:0000411,1.30e-09,10;UBERON:0001950,1.30e-09,10;UBERON:0003076,2.87e-07,12;UBERON:0003057,2.87e-07,12|phase1_expression=0.640595388419176,0,0,0,0,0.671517087647559,0.467225281191051,0,0,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0,0,9.52484849691981,0,0,0.47997726838022,0.22940928106717,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0.577703239502549,0,0,0,0,0,0.588231488031014,0,3.39857247121808,0.125896817975577,0.101376931219515,0,0,3.48840250208714,0.878744730937887,1.1665793944457,0.419959264876088,1.43752564364972,0,0,0,0,0.573066879877513,0,7.89034197352431,8.99284664762456,6.97214543856797,0,0,0,0,0,1.49800055259202,0.384218305321555,1.65903379693564,2.29510095163874,2.3135745748652,14.2825492201902,8.83474163806454,3.91970557487853,3.25874601462004,2.75765635983006,22.0231761998777,31.0280231547006,26.8811433198426,9.62769900430415,15.5528994124096,14.5855743755893,13.959149950069,19.1339287410771,26.1285003698345,18.2669722993674,20.786265396669,13.7935589910722,1.06016670666458,2.04043212288321,0.579728977403356,0,0.679971333707751,1.07940638327563,0,0,1.54488862144927,0,0,0,1.54927761754349,0,0,0,0,0,0,1.94112595522402,0.258937883647172,4.00793775475027,1.38788261412909,3.65358573974569,3.68984795609694,5.12456977878917,3.64524992120685,5.15233024451669,0,32.3902559500602,0,0.970601099684455,0.441683036920787,0,0,50.3582970859861,53.1994635306176,1.02182822083437,0,0,0,28.3104308475115,21.0450277296568,14.7015591972051,37.719877481724,38.8687495142102,28.2591740601002,32.6104938766193,2.34230536855727,0.497627882440372,0.252722758433675,3.57751155007006,0,0.689706313300419,1.26043490863744,2.86339153887859,4.35433594568498,3.84341160854549,4.77878795254617,12.4177617954728,0,0.189106080167819,0,0.219195732427575,0.556094498451196,0.348252166522167,1.02891068203972,0.398068533636986,0,0,0,0.207125772535502,1.17263029990548,0.36012412292203,0.946978942340841,0.196764231747404,0.617068451549513,0,0.536546802799238,0.233530684734339,0.987359099480883,2.46251196118643,4.62092214411378,5.70179950958796,4.61055242111206,2.68412837520744,30.9126224389267,11.0107935245834,0.991256348951394,0.528901133327089,0.639864751605702,0.928946687441754,1.2886746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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:24012 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q80XD3,uniprot:O54829 | |||
|association_with_transcript=6bp_to_NM_001199003,NM_011880,uc007dtk.2,uc007dtl.2_5end | |||
|cluster_id=chr1:177422615..177422669,- | |||
|description=CAGE_peak_1_at_Rgs7_5end | |||
|id=chr1:177422615..177422669,- | |||
|ontology_enrichment_celltype=CL:0000117!1.21e-10!23;CL:0000337!1.21e-10!23;CL:0000540!1.74e-10!33;CL:0000047!1.74e-10!33;CL:0000031!1.74e-10!33;CL:0000404!1.74e-10!33;CL:0000221!2.00e-09!44;CL:0000133!2.00e-09!44;CL:0002319!2.37e-09!43;CL:0000393!4.22e-07!39;CL:0000211!4.22e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.13e-12,23;CL:0000337,1.13e-12,23;CL:0000540,2.41e-11,33;CL:0000047,2.41e-11,33;CL:0000031,2.41e-11,33;CL:0000404,2.41e-11,33;CL:0000221,1.23e-09,44;CL:0000133,1.23e-09,44;CL:0002319,1.54e-09,43;CL:0000393,6.01e-08,39;CL:0000211,6.01e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.09e-27!102;UBERON:0000924!2.09e-27!102;UBERON:0006601!2.09e-27!102;UBERON:0002346!8.47e-27!71;UBERON:0003075!8.47e-27!71;UBERON:0007284!8.47e-27!71;UBERON:0000073!2.19e-26!75;UBERON:0001016!2.19e-26!75;UBERON:0001017!2.67e-26!73;UBERON:0005743!2.67e-26!73;UBERON:0001049!9.03e-23!52;UBERON:0005068!9.03e-23!52;UBERON:0006241!9.03e-23!52;UBERON:0007135!9.03e-23!52;UBERON:0000955!6.62e-22!50;UBERON:0006238!6.62e-22!50;UBERON:0000033!7.32e-22!63;UBERON:0002616!2.92e-21!49;UBERON:0003056!2.75e-18!49;UBERON:0003080!1.50e-17!40;UBERON:0002780!6.46e-17!39;UBERON:0001890!6.46e-17!39;UBERON:0006240!6.46e-17!39;UBERON:0002020!1.17e-16!34;UBERON:0002791!5.10e-14!29;UBERON:0003528!5.10e-14!29;UBERON:0001893!5.10e-14!29;UBERON:0000956!8.42e-10!21;UBERON:0001869!8.42e-10!21;UBERON:0000203!8.42e-10!21;UBERON:0002619!4.50e-09!17;UBERON:0007811!6.16e-09!86;UBERON:0002021!3.86e-08!10;UBERON:0000411!3.86e-08!10;UBERON:0001950!3.86e-08!10;UBERON:0000468!1.27e-07!333;UBERON:0000153!2.57e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.62e-29,75;UBERON:0001017,3.52e-29,73;UBERON:0002346,1.53e-28,64;UBERON:0003075,1.53e-28,64;UBERON:0007284,1.53e-28,64;UBERON:0000073,2.02e-28,54;UBERON:0001049,9.03e-27,52;UBERON:0005068,9.03e-27,52;UBERON:0006241,9.03e-27,52;UBERON:0007135,9.03e-27,52;UBERON:0004121,9.32e-27,95;UBERON:0000924,9.32e-27,95;UBERON:0006601,9.32e-27,95;UBERON:0010371,4.57e-25,73;UBERON:0010314,4.43e-24,92;UBERON:0000955,2.30e-23,47;UBERON:0006238,2.30e-23,47;UBERON:0002616,1.35e-22,46;UBERON:0003056,9.21e-21,49;UBERON:0003080,5.36e-20,40;UBERON:0002020,2.65e-19,34;UBERON:0002780,3.12e-19,39;UBERON:0001890,3.12e-19,39;UBERON:0006240,3.12e-19,39;UBERON:0003528,4.34e-16,29;UBERON:0002791,4.34e-16,29;UBERON:0001893,4.34e-16,29;UBERON:0000956,5.71e-11,21;UBERON:0001869,5.71e-11,21;UBERON:0000203,5.71e-11,21;UBERON:0002619,4.82e-10,17;UBERON:0002021,1.30e-09,10;UBERON:0000411,1.30e-09,10;UBERON:0001950,1.30e-09,10;UBERON:0003076,2.87e-07,12;UBERON:0003057,2.87e-07,12 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0.671517087647559,0.467225281191051,0,0,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0,0,9.52484849691981,0,0,0.47997726838022,0.22940928106717,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0.577703239502549,0,0,0,0,0,0.588231488031014,0,3.39857247121808,0.125896817975577,0.101376931219515,0,0,3.48840250208714,0.878744730937887,1.1665793944457,0.419959264876088,1.43752564364972,0,0,0,0,0.573066879877513,0,7.89034197352431,8.99284664762456,6.97214543856797,0,0,0,0,0,1.49800055259202,0.384218305321555,1.65903379693564,2.29510095163874,2.3135745748652,14.2825492201902,8.83474163806454,3.91970557487853,3.25874601462004,2.75765635983006,22.0231761998777,31.0280231547006,26.8811433198426,9.62769900430415,15.5528994124096,14.5855743755893,13.959149950069,19.1339287410771,26.1285003698345,18.2669722993674,20.786265396669,13.7935589910722,1.06016670666458,2.04043212288321,0.579728977403356,0,0.679971333707751,1.07940638327563,0,0,1.54488862144927,0,0,0,1.54927761754349,0,0,0,0,0,0,1.94112595522402,0.258937883647172,4.00793775475027,1.38788261412909,3.65358573974569,3.68984795609694,5.12456977878917,3.64524992120685,5.15233024451669,0,32.3902559500602,0,0.970601099684455,0.441683036920787,0,0,50.3582970859861,53.1994635306176,1.02182822083437,0,0,0,28.3104308475115,21.0450277296568,14.7015591972051,37.719877481724,38.8687495142102,28.2591740601002,32.6104938766193,2.34230536855727,0.497627882440372,0.252722758433675,3.57751155007006,0,0.689706313300419,1.26043490863744,2.86339153887859,4.35433594568498,3.84341160854549,4.77878795254617,12.4177617954728,0,0.189106080167819,0,0.219195732427575,0.556094498451196,0.348252166522167,1.02891068203972,0.398068533636986,0,0,0,0.207125772535502,1.17263029990548,0.36012412292203,0.946978942340841,0.196764231747404,0.617068451549513,0,0.536546802799238,0.233530684734339,0.987359099480883,2.46251196118643,4.62092214411378,5.70179950958796,4.61055242111206,2.68412837520744,30.9126224389267,11.0107935245834,0.991256348951394,0.528901133327089,0.639864751605702,0.928946687441754,1.28867461322093,0.80673409849337,0.667134131534611,0.760902504450237,0.474529061544512,0.658795818896044,0.251335208800269,0.198956472041151,0.19496408711912,0.898819408654221,0,0.199141273254367,0,0.456994050438915,0,0,0.387904974335251,0.701358198903186,0.0632365371242573,0.590440591918409,0.627994911365499,0.863780147452604,0,0.500535317148282,0,0,0,0,0,0,0,0,0,1.11642284300551,0,1.26289438973556,0.717589654087649,0,0.369506380333209,0.568474235311454,0.325929952884052,0.678980343100753,0.234690248288502,0,0.238043640886014,0,0.157635144106191,0,0.478364305972461,0.655453258862952,0.863424909329478,0.289298117163023,0,0,0,1.65562047782839,19.7477225684984,23.4423373184406,0,0.757412781613119,4.73262329124385,2.34263246577983,1.72338718186239,0.477937595905104,1.11399337041197,0.566153061577665,2.42886421004937,2.33804686329049,2.76701444562566,26.3483479465882,2.98074178937364,0.35613120733451,0.81443479676788,0.494910368917606,0,0.242780636154981,0.302323556964751,0.377210159511796,1.47650946440386,0.922305443831782,0.775284879504663,0.363533729477506,0,2.21225730555071,1.05418608574999,0,23.4903327970114,1.62054984628179,0.517434735131018,2.14337035031592,4.25616560741457,3.0322698992352,5.59466670047211,6.39376393140658,0,0,1.10264199027481,1.48397627647332,2.09903754704677,0.241251699712623,0.238744688006273,0.328281799490123,0,21.8801856372401,0.170870880797853,0.619160603889667,0,0.188368457004691,0.136694227721025,0,0,0,0,1.90934123603023,0.632671987162271,2.23651413839534,1.29606408986162,1.46361807210128,0.436725127492355,1.61837215661785,1.07449492442937,1.57053565190418,0.90730481304255,0.621339313086926,0,0.598066184175915,0.330916980914195,1.36115831840833,0.645799117388655,1.520605129417,0.938857909166032,0.13020438484395,0.104859344425711,0,0.576060012515731,0,0.202725215290164,0,0.129920822977795,0.179026695667481,0.198681354781265,0.240390899039938,0,0.504832249740738,0.15241361331,0.201652370273681,0.0974578807397524,0,0,0.453460767230423,0.665957860122194,0.179427713218951,0.335769232728157,2.31827512838629,0.93841237725591,0.915758121336325,0.643105137237198,0,46.3096510945995,38.2069946300957,35.5195218332426,32.3083982806133,53.4364365421101,47.5898155355511,37.8012600129811,31.9728054289197,39.4233895816258,44.0096264989047,1.03787347584177,1.59609949360412,2.04880326904961,2.67417388775123,1.88651846365184,2.20612210140017,5.55616819504038,4.73880631649457,4.1719497246936,4.29585259998456,3.29523089857312,6.22466926574051,3.65201879132541,5.6342134116285,5.11175673704958,2.38146845641537,4.1718357340148,3.47236596834669,3.70877310722976,3.53277408322554,4.4573002810104,3.01708870470874,2.14592570952589,3.48831399917588,5.08190654242785,3.89227196301712,3.84148743032822,3.6829759601298,4.75314398460516,3.92799590160417,4.86403574309114,3.64466584789585,3.27384834535751,3.87342102964915,3.47231899766054,3.2475375131933,2.33931608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| |||
|short_description=p1@Rgs7 | |||
}} |
Revision as of 08:47, 5 August 2015
Short description: | p1@Rgs7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rgs7_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 6bp_to_NM_001199003, NM_011880, uc007dtk.2, uc007dtl.2_5end |
EntrezGene: | 24012 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.13e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.13e-12 | 23 |
neuron | 2.41e-11 | 33 |
neuronal stem cell | 2.41e-11 | 33 |
neuroblast | 2.41e-11 | 33 |
electrically signaling cell | 2.41e-11 | 33 |
ectodermal cell | 1.23e-09 | 44 |
neurectodermal cell | 1.23e-09 | 44 |
neural cell | 1.54e-09 | 43 |
electrically responsive cell | 6.01e-08 | 39 |
electrically active cell | 6.01e-08 | 39 |