FFCP PHASE1:Mm9::chr7:52430949..52430985,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=42|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:52430949..52430985,+|id=chr7:52430949..52430985,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000956!1.48e-23!21;UBERON:0001869!1.48e-23!21;UBERON:0000203!1.48e-23!21;UBERON:0000033!3.26e-22!63;UBERON:0002021!7.89e-22!10;UBERON:0000411!7.89e-22!10;UBERON:0001950!7.89e-22!10;UBERON:0000955!2.01e-21!50;UBERON:0006238!2.01e-21!50;UBERON:0002616!6.75e-20!49;UBERON:0002619!8.94e-20!17;UBERON:0002791!4.90e-18!29;UBERON:0003528!4.90e-18!29;UBERON:0001893!4.90e-18!29;UBERON:0003056!6.78e-18!49;UBERON:0002780!8.60e-16!39;UBERON:0001890!8.60e-16!39;UBERON:0006240!8.60e-16!39;UBERON:0003080!2.84e-15!40;UBERON:0001049!4.75e-15!52;UBERON:0005068!4.75e-15!52;UBERON:0006241!4.75e-15!52;UBERON:0007135!4.75e-15!52;UBERON:0002020!9.83e-15!34;UBERON:0002346!2.28e-14!71;UBERON:0003075!2.28e-14!71;UBERON:0007284!2.28e-14!71;UBERON:0007811!2.56e-14!86;UBERON:0001017!1.20e-12!73;UBERON:0005743!1.20e-12!73;UBERON:0000153!1.74e-12!94;UBERON:0000073!3.84e-12!75;UBERON:0001016!3.84e-12!75;UBERON:0004121!6.02e-11!102;UBERON:0000924!6.02e-11!102;UBERON:0006601!6.02e-11!102|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.49e-39,10;UBERON:0000411,1.49e-39,10;UBERON:0001950,1.49e-39,10;UBERON:0002619,3.92e-28,17;UBERON:0000956,3.06e-27,21;UBERON:0001869,3.06e-27,21;UBERON:0000203,3.06e-27,21;UBERON:0000955,1.04e-21,47;UBERON:0006238,1.04e-21,47;UBERON:0003528,2.62e-19,29;UBERON:0002791,2.62e-19,29;UBERON:0001893,2.62e-19,29;UBERON:0002616,3.60e-19,46;UBERON:0001049,1.00e-16,52;UBERON:0005068,1.00e-16,52;UBERON:0006241,1.00e-16,52;UBERON:0007135,1.00e-16,52;UBERON:0002780,1.36e-16,39;UBERON:0001890,1.36e-16,39;UBERON:0006240,1.36e-16,39;UBERON:0002020,3.08e-16,34;UBERON:0003080,3.90e-16,40;UBERON:0000073,4.97e-16,54;UBERON:0002346,2.63e-15,64;UBERON:0003075,2.63e-15,64;UBERON:0007284,2.63e-15,64;UBERON:0003056,3.55e-15,49;UBERON:0001017,3.28e-13,73;UBERON:0010371,3.77e-13,73;UBERON:0001016,8.46e-13,75;UBERON:0004121,3.77e-11,95;UBERON:0000924,3.77e-11,95;UBERON:0006601,3.77e-11,95;UBERON:0010314,5.69e-10,92|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0.540023753326763,0,0,0,0,0.0958454710182364,0,0,0.893811366596314,0.307213066512487,0,0,0,0,0,0.45839474333043,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46390398505774,30.1603257811375,0,0,0,0,0,0,0,2.60736480288415,4.34716277461562,0.62336413367868,1.1356888414743,0,0,0,0.841767423545896,0,0,0,0,0,0.12811372028485,0.468508622798644,2.06962696591213,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0.292399974850665,0,0,2.73376933133365,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,2.89189184779626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0.524296722128554,0.241584120826006,1.15212002503146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,3.68260189205742,1.71868654031819,8.42080593484069,2.74033007908257,0.755393897389701,3.37511250115903,4.05289082901798,2.26571204492102,3.10656187051092,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr7:52430949..52430985,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=42 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:52430949..52430985,+ | |||
|description=CAGE_peak_at_chr7:52430949..52430985,+ | |||
|id=chr7:52430949..52430985,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000956!1.48e-23!21;UBERON:0001869!1.48e-23!21;UBERON:0000203!1.48e-23!21;UBERON:0000033!3.26e-22!63;UBERON:0002021!7.89e-22!10;UBERON:0000411!7.89e-22!10;UBERON:0001950!7.89e-22!10;UBERON:0000955!2.01e-21!50;UBERON:0006238!2.01e-21!50;UBERON:0002616!6.75e-20!49;UBERON:0002619!8.94e-20!17;UBERON:0002791!4.90e-18!29;UBERON:0003528!4.90e-18!29;UBERON:0001893!4.90e-18!29;UBERON:0003056!6.78e-18!49;UBERON:0002780!8.60e-16!39;UBERON:0001890!8.60e-16!39;UBERON:0006240!8.60e-16!39;UBERON:0003080!2.84e-15!40;UBERON:0001049!4.75e-15!52;UBERON:0005068!4.75e-15!52;UBERON:0006241!4.75e-15!52;UBERON:0007135!4.75e-15!52;UBERON:0002020!9.83e-15!34;UBERON:0002346!2.28e-14!71;UBERON:0003075!2.28e-14!71;UBERON:0007284!2.28e-14!71;UBERON:0007811!2.56e-14!86;UBERON:0001017!1.20e-12!73;UBERON:0005743!1.20e-12!73;UBERON:0000153!1.74e-12!94;UBERON:0000073!3.84e-12!75;UBERON:0001016!3.84e-12!75;UBERON:0004121!6.02e-11!102;UBERON:0000924!6.02e-11!102;UBERON:0006601!6.02e-11!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.49e-39,10;UBERON:0000411,1.49e-39,10;UBERON:0001950,1.49e-39,10;UBERON:0002619,3.92e-28,17;UBERON:0000956,3.06e-27,21;UBERON:0001869,3.06e-27,21;UBERON:0000203,3.06e-27,21;UBERON:0000955,1.04e-21,47;UBERON:0006238,1.04e-21,47;UBERON:0003528,2.62e-19,29;UBERON:0002791,2.62e-19,29;UBERON:0001893,2.62e-19,29;UBERON:0002616,3.60e-19,46;UBERON:0001049,1.00e-16,52;UBERON:0005068,1.00e-16,52;UBERON:0006241,1.00e-16,52;UBERON:0007135,1.00e-16,52;UBERON:0002780,1.36e-16,39;UBERON:0001890,1.36e-16,39;UBERON:0006240,1.36e-16,39;UBERON:0002020,3.08e-16,34;UBERON:0003080,3.90e-16,40;UBERON:0000073,4.97e-16,54;UBERON:0002346,2.63e-15,64;UBERON:0003075,2.63e-15,64;UBERON:0007284,2.63e-15,64;UBERON:0003056,3.55e-15,49;UBERON:0001017,3.28e-13,73;UBERON:0010371,3.77e-13,73;UBERON:0001016,8.46e-13,75;UBERON:0004121,3.77e-11,95;UBERON:0000924,3.77e-11,95;UBERON:0006601,3.77e-11,95;UBERON:0010314,5.69e-10,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0.540023753326763,0,0,0,0,0.0958454710182364,0,0,0.893811366596314,0.307213066512487,0,0,0,0,0,0.45839474333043,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46390398505774,30.1603257811375,0,0,0,0,0,0,0,2.60736480288415,4.34716277461562,0.62336413367868,1.1356888414743,0,0,0,0.841767423545896,0,0,0,0,0,0.12811372028485,0.468508622798644,2.06962696591213,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0.292399974850665,0,0,2.73376933133365,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,2.89189184779626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0.524296722128554,0.241584120826006,1.15212002503146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,3.68260189205742,1.71868654031819,8.42080593484069,2.74033007908257,0.755393897389701,3.37511250115903,4.05289082901798,2.26571204492102,3.10656187051092,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr7:52430949..52430985,+ | |||
}} |
Latest revision as of 08:13, 5 August 2015
Short description: | p@chr7:52430949..52430985, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:52430949..52430985, + |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.49e-39 | 10 |
visual cortex | 1.49e-39 | 10 |
neocortex | 1.49e-39 | 10 |
regional part of cerebral cortex | 3.92e-28 | 17 |
cerebral cortex | 3.06e-27 | 21 |
cerebral hemisphere | 3.06e-27 | 21 |
pallium | 3.06e-27 | 21 |
brain | 1.04e-21 | 47 |
future brain | 1.04e-21 | 47 |
brain grey matter | 2.62e-19 | 29 |
regional part of telencephalon | 2.62e-19 | 29 |
telencephalon | 2.62e-19 | 29 |
regional part of brain | 3.60e-19 | 46 |
neural tube | 1.00e-16 | 52 |
neural rod | 1.00e-16 | 52 |
future spinal cord | 1.00e-16 | 52 |
neural keel | 1.00e-16 | 52 |
regional part of forebrain | 1.36e-16 | 39 |
forebrain | 1.36e-16 | 39 |
future forebrain | 1.36e-16 | 39 |
gray matter | 3.08e-16 | 34 |
anterior neural tube | 3.90e-16 | 40 |
regional part of nervous system | 4.97e-16 | 54 |
neurectoderm | 2.63e-15 | 64 |
neural plate | 2.63e-15 | 64 |
presumptive neural plate | 2.63e-15 | 64 |
pre-chordal neural plate | 3.55e-15 | 49 |
central nervous system | 3.28e-13 | 73 |
ecto-epithelium | 3.77e-13 | 73 |
nervous system | 8.46e-13 | 75 |
ectoderm-derived structure | 3.77e-11 | 95 |
ectoderm | 3.77e-11 | 95 |
presumptive ectoderm | 3.77e-11 | 95 |
structure with developmental contribution from neural crest | 5.69e-10 | 92 |