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FFCP PHASE1:Mm9::chr15:58720626..58720706,+: Difference between revisions

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{{FFCP|EntrezGene=75841|HGNC=|UniProt=Q7TMV1|association_with_transcript=-77bp_to_ENSMUST00000036904,NM_175226,uc007vtq.2_5end|description=CAGE_peak_1_at_Rnf139_5end|id=chr15:58720626..58720706,+|ontology_enrichment_celltype=CL:0002031!1.36e-11!25;CL:0000988!5.33e-10!32;CL:0002032!5.33e-10!32;CL:0000037!5.33e-10!32;CL:0000566!5.33e-10!32;CL:0000837!5.33e-10!32;CL:0002320!1.82e-07!46;CL:0000134!1.82e-07!46;CL:0000838!3.36e-07!12;CL:0000542!5.62e-07!13;CL:0000051!5.62e-07!13;CL:0000738!6.69e-07!17;CL:0002087!6.69e-07!17|ontology_enrichment_celltype_v019_2=CL:0002031,1.36e-11,25;CL:0000988,5.33e-10,32;CL:0002032,5.33e-10,32;CL:0000037,5.33e-10,32;CL:0000837,5.33e-10,32;CL:0002320,1.82e-07,46;CL:0000134,1.82e-07,46;CL:0000838,3.36e-07,12;CL:0000542,5.62e-07,13;CL:0000051,5.62e-07,13;CL:0000738,6.69e-07,17;CL:0002087,6.69e-07,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!4.13e-09!32;UBERON:0003081!5.38e-09!88;UBERON:0000914!5.88e-08!17;UBERON:0000926!7.12e-08!193;UBERON:0004120!7.12e-08!193;UBERON:0006603!7.12e-08!193;UBERON:0002384!1.82e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0003081,3.97e-09,87;UBERON:0002204,4.13e-09,32;UBERON:0000926,7.06e-09,120;UBERON:0004120,7.06e-09,120;UBERON:0006603,7.06e-09,120;UBERON:0002384,1.82e-07,46|phase1_expression=12.4916100741739,4.53668029931169,6.82498859084304,4.83942738090928,6.51164448930251,6.37941233265181,5.84031601488814,17.3025253411712,10.2775767170717,9.36258105287974,12.3276937122364,12.1253681672911,19.6880839420887,13.7250031797826,20.6528052325711,16.8054471933556,18.1886088313318,18.9277299214943,16.7279608999001,15.7024171165271,4.67738095830884,8.24114894967348,8.097193463307,6.07971206614945,7.34109699414944,5.16808767703518,4.73838195774982,3.23206849028834,4.75058548640935,6.30075324399827,4.6563407237614,8.89042942843484,7.38077745101484,15.8481681015439,6.06588401477677,5.48574329683025,3.26670970019791,15.0671387065287,22.6587249911902,10.470474879476,17.0587131528994,12.9778642142105,16.5073520030592,10.1976422560218,11.5569701590247,11.1963518818626,8.60630478782843,2.18025156380447,3.73466510648602,4.27745777963423,3.21968769738334,1.43752564364972,20.1339127269284,16.6833292662609,15.7964085596958,9.00408026125814,7.73640287834643,10.3134418455488,5.66486090406874,4.23192783417626,2.53532561402472,2.37191172448392,4.4464739805557,7.19919773825119,2.96659908770092,4.9733608046227,4.79360176829448,6.53171119046643,2.7996195323289,2.8351247049655,2.94454945891935,5.99867067247988,5.30084498283872,3.30725157880376,2.77951865952885,4.5960939330501,1.10115880999389,5.36286819957788,3.84016333140609,4.08847491963601,3.7509933876988,3.64639359389732,3.90856198601933,4.50210088025344,3.66715794664344,7.95497180778903,6.40672563595963,5.96478226640962,8.17842887998388,8.16172849153284,7.8263411949453,6.88339101585109,7.47968467078526,5.39703191637817,7.14754059192436,4.03224198387602,6.60088774619234,7.83979483859066,11.6903702071291,8.83348936275851,14.6477156567748,6.41632387071589,10.1922095882658,42.6640021891999,5.19578498426914,4.30711771307668,7.07734223020697,6.50848114398642,5.95557132388495,5.49235914539852,5.03107447621794,5.48037860961854,3.22861696158482,6.17962826265753,8.46638691377075,6.28332956648377,7.41584903203122,4.48258006451726,11.4999371753484,13.426648545635,10.3795513676385,11.1521308221101,1.86391761218122,4.68449275218475,2.51336048176146,7.15279754584056,11.0229914545447,3.59941638596045,9.53026703047985,2.09706895166752,4.11750542536764,3.14135880282161,5.04090528557602,3.83573185995496,3.32460871295296,4.70499662896497,9.87841829348068,7.0911973247753,8.08712826987759,6.52369753248069,3.77349284591841,5.28774840196988,6.84236093260327,6.78171680260718,7.48401490664606,5.25266253167884,6.09061209638237,5.95017752699736,2.37124792226126,2.83659120251729,4.39877810409872,5.91828477554452,6.11703948296315,3.83077383174383,4.52720700097476,6.56813080501028,2.80885274925294,6.17634977075316,8.80906848126337,7.04227626620706,5.39409937956521,6.84235833551856,9.70653415899362,7.28027657465394,6.94202007993202,5.11574678450897,8.58474884478781,12.4938916332871,9.2153515951549,9.68588038066662,10.7821516695988,7.74859933354261,6.36695334344047,11.8101648509127,3.57492912559016,3.80747065803352,2.97376904685418,3.17340679996253,6.82522401712749,5.80591679651096,5.7990357594942,6.45387278794696,4.66993892074228,4.56541502670142,5.21981967698963,6.58795818896044,7.54005626400809,7.36138946552258,6.82374304916921,0.898819408654221,4.10662294761919,2.98711909881551,4.93136542478012,3.99869794134051,6.76246414038483,5.49858585182348,5.43066964069352,7.36426108848345,7.58838445491087,5.31396532726568,5.80895293013087,7.28043267138623,5.92905254174298,6.00642380577939,8.64859578498093,7.42044970870017,10.7515864335907,10.6117950291063,7.63877555344259,8.91858026097513,9.56597837972709,5.76578967694971,23.0029130443767,7.07067800570156,5.61667811606209,3.28352541331245,5.381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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:75841
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q7TMV1
|association_with_transcript=-77bp_to_ENSMUST00000036904,NM_175226,uc007vtq.2_5end
|cluster_id=chr15:58720626..58720706,+
|description=CAGE_peak_1_at_Rnf139_5end
|id=chr15:58720626..58720706,+
|ontology_enrichment_celltype=CL:0002031!1.36e-11!25;CL:0000988!5.33e-10!32;CL:0002032!5.33e-10!32;CL:0000037!5.33e-10!32;CL:0000566!5.33e-10!32;CL:0000837!5.33e-10!32;CL:0002320!1.82e-07!46;CL:0000134!1.82e-07!46;CL:0000838!3.36e-07!12;CL:0000542!5.62e-07!13;CL:0000051!5.62e-07!13;CL:0000738!6.69e-07!17;CL:0002087!6.69e-07!17
|ontology_enrichment_celltype_v019_2=CL:0002031,1.36e-11,25;CL:0000988,5.33e-10,32;CL:0002032,5.33e-10,32;CL:0000037,5.33e-10,32;CL:0000837,5.33e-10,32;CL:0002320,1.82e-07,46;CL:0000134,1.82e-07,46;CL:0000838,3.36e-07,12;CL:0000542,5.62e-07,13;CL:0000051,5.62e-07,13;CL:0000738,6.69e-07,17;CL:0002087,6.69e-07,17
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002204!4.13e-09!32;UBERON:0003081!5.38e-09!88;UBERON:0000914!5.88e-08!17;UBERON:0000926!7.12e-08!193;UBERON:0004120!7.12e-08!193;UBERON:0006603!7.12e-08!193;UBERON:0002384!1.82e-07!46
|ontology_enrichment_uberon_v019_2=UBERON:0003081,3.97e-09,87;UBERON:0002204,4.13e-09,32;UBERON:0000926,7.06e-09,120;UBERON:0004120,7.06e-09,120;UBERON:0006603,7.06e-09,120;UBERON:0002384,1.82e-07,46
|phase1_expression=12.4916100741739,4.53668029931169,6.82498859084304,4.83942738090928,6.51164448930251,6.37941233265181,5.84031601488814,17.3025253411712,10.2775767170717,9.36258105287974,12.3276937122364,12.1253681672911,19.6880839420887,13.7250031797826,20.6528052325711,16.8054471933556,18.1886088313318,18.9277299214943,16.7279608999001,15.7024171165271,4.67738095830884,8.24114894967348,8.097193463307,6.07971206614945,7.34109699414944,5.16808767703518,4.73838195774982,3.23206849028834,4.75058548640935,6.30075324399827,4.6563407237614,8.89042942843484,7.38077745101484,15.8481681015439,6.06588401477677,5.48574329683025,3.26670970019791,15.0671387065287,22.6587249911902,10.470474879476,17.0587131528994,12.9778642142105,16.5073520030592,10.1976422560218,11.5569701590247,11.1963518818626,8.60630478782843,2.18025156380447,3.73466510648602,4.27745777963423,3.21968769738334,1.43752564364972,20.1339127269284,16.6833292662609,15.7964085596958,9.00408026125814,7.73640287834643,10.3134418455488,5.66486090406874,4.23192783417626,2.53532561402472,2.37191172448392,4.4464739805557,7.19919773825119,2.96659908770092,4.9733608046227,4.79360176829448,6.53171119046643,2.7996195323289,2.8351247049655,2.94454945891935,5.99867067247988,5.30084498283872,3.30725157880376,2.77951865952885,4.5960939330501,1.10115880999389,5.36286819957788,3.84016333140609,4.08847491963601,3.7509933876988,3.64639359389732,3.90856198601933,4.50210088025344,3.66715794664344,7.95497180778903,6.40672563595963,5.96478226640962,8.17842887998388,8.16172849153284,7.8263411949453,6.88339101585109,7.47968467078526,5.39703191637817,7.14754059192436,4.03224198387602,6.60088774619234,7.83979483859066,11.6903702071291,8.83348936275851,14.6477156567748,6.41632387071589,10.1922095882658,42.6640021891999,5.19578498426914,4.30711771307668,7.07734223020697,6.50848114398642,5.95557132388495,5.49235914539852,5.03107447621794,5.48037860961854,3.22861696158482,6.17962826265753,8.46638691377075,6.28332956648377,7.41584903203122,4.48258006451726,11.4999371753484,13.426648545635,10.3795513676385,11.1521308221101,1.86391761218122,4.68449275218475,2.51336048176146,7.15279754584056,11.0229914545447,3.59941638596045,9.53026703047985,2.09706895166752,4.11750542536764,3.14135880282161,5.04090528557602,3.83573185995496,3.32460871295296,4.70499662896497,9.87841829348068,7.0911973247753,8.08712826987759,6.52369753248069,3.77349284591841,5.28774840196988,6.84236093260327,6.78171680260718,7.48401490664606,5.25266253167884,6.09061209638237,5.95017752699736,2.37124792226126,2.83659120251729,4.39877810409872,5.91828477554452,6.11703948296315,3.83077383174383,4.52720700097476,6.56813080501028,2.80885274925294,6.17634977075316,8.80906848126337,7.04227626620706,5.39409937956521,6.84235833551856,9.70653415899362,7.28027657465394,6.94202007993202,5.11574678450897,8.58474884478781,12.4938916332871,9.2153515951549,9.68588038066662,10.7821516695988,7.74859933354261,6.36695334344047,11.8101648509127,3.57492912559016,3.80747065803352,2.97376904685418,3.17340679996253,6.82522401712749,5.80591679651096,5.7990357594942,6.45387278794696,4.66993892074228,4.56541502670142,5.21981967698963,6.58795818896044,7.54005626400809,7.36138946552258,6.82374304916921,0.898819408654221,4.10662294761919,2.98711909881551,4.93136542478012,3.99869794134051,6.76246414038483,5.49858585182348,5.43066964069352,7.36426108848345,7.58838445491087,5.31396532726568,5.80895293013087,7.28043267138623,5.92905254174298,6.00642380577939,8.64859578498093,7.42044970870017,10.7515864335907,10.6117950291063,7.63877555344259,8.91858026097513,9.56597837972709,5.76578967694971,23.0029130443767,7.07067800570156,5.61667811606209,3.28352541331245,5.38192240565737,4.82443521363367,7.944387177164,4.16881105895066,4.72598431681875,4.41337223015489,5.63256595892405,4.69017520837084,6.66522194480839,12.6836871107569,8.98520321405289,6.2010113101657,7.97273843287435,6.55453258862952,9.15230403889247,7.66640010482011,15.0791283939272,11.9659250440116,2.45882136509518,4.41498794087572,3.05046120976805,4.92289083687253,7.70494243270374,9.08895337935743,7.88770548540642,4.29482618726302,6.89354872744957,6.4521575447189,5.79276552614225,5.66153061577665,4.04810701674894,5.26060544240361,5.92931666919785,5.14114106274891,7.94864477166304,3.91744328067962,9.93610452056814,5.77395430403874,1.32745138339963,7.76898035695941,5.44182402536552,5.46954731292105,6.20133975049623,4.91896236710284,8.26970538138308,7.99774204850512,6.41695281092498,6.0046984007805,5.27093042874994,4.12542172992747,6.46835250932197,6.66226047915848,7.24408629183425,6.85878512101095,10.1083933176096,6.95638388648075,7.73380396829969,9.74287837166718,9.62154003061212,10.1679394014634,5.73373834942901,6.43056386471772,7.58882805470756,5.66941494324665,5.37175548014114,4.92422699235184,4.95517422270746,5.00648315428376,11.1066072518604,3.09580301944834,4.44466865687308,11.1137389632768,9.15851325730869,9.83746144788047,17.3377998593732,16.0944170172207,16.7221968303353,3.81868247206045,6.95939185878498,6.30290348093231,6.91234181259528,6.48173717644853,4.80397640241591,7.68726774393478,7.93473174963225,4.4498510137285,5.57344385154709,7.45607175704311,1.69107881605257,4.9340460194513,4.96375471371293,7.58359634541786,6.71631082084202,6.75824501963113,9.38857909166032,7.68205870579306,6.18670132111694,2.41584120826006,4.32045009386798,7.90027801570446,6.28448167399509,4.62199307241723,4.93699127315621,5.54982756569192,5.56307793387542,8.29348601687785,7.38447635872886,4.2405908978222,6.47757856567499,8.97353047717881,7.69917257844044,7.21588812302471,12.3889516312463,6.80191150845634,8.21348027484039,5.9211145362254,7.72269235274761,6.18206700903009,7.88266396894964,8.97442958909599,6.21668299329291,4.01257683228291,5.64751842617067,2.30162618253588,2.29158205375759,5.84300819968538,5.48066015816514,2.2661816921691,2.70009000092722,4.95353323546643,7.25027854374727,4.14208249401456,2.69847103718859,7.18244772121856,6.31714341290296,5.34834777550247,5.03071590307158,5.69914876195044,5.55616819504038,5.15087643097235,6.4183841918363,6.57012750585873,3.54871019846336,4.90428487603798,6.74218853783153,7.36289252655997,7.06456268154043,7.62069906052918,6.14186927507734,6.36600427530227,7.41754621445952,5.15196220470391,4.11443102862498,5.50174999093946,6.43777712857767,7.70336008151341,7.0582035311498,6.68455402344244,6.95126296916536,4.99832451731901,6.24698923690964,6.17256498823512,6.64356101495375,7.48634066054282,5.32000356120596,7.43696837692637,6.75173138433995,4.99621155875892,6.31615342802603,7.73535794573874,9.37312827137333,9.70602244125868,10.2021847672985
|short_description=p1@Rnf139
}}

Revision as of 08:03, 5 August 2015

Short description:p1@Rnf139
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rnf139_5end
Coexpression cluster:NA
Association with transcript: -77bp_to_ENSMUST00000036904, NM_175226, uc007vtq.2_5end
EntrezGene:75841
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rnf139

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G712.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.54
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I66.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.84
CD326+ enterocyte, pool2.CNhs13197.11849-124I46.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.38
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.84
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E917.30
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E710.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F29.36
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E612.33
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F112.13
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E419.69
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E813.73
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A120.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A316.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A518.19
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A218.93
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A416.73
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A615.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H28.24
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I98.10
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D27.34
GP2+ M cell, pool1.CNhs13228.11845-124H95.17
GP2+ M cell, pool2.CNhs13231.11846-124I14.74
GP2+ M cell, pool3.CNhs13240.11847-124I23.23
Ileum epithelium, pool1.CNhs13199.10252-104B94.75
Ileum epithelium, pool2.CNhs13232.10253-104C16.30
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.66
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I38.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G67.38
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F56.07
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.27
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G815.07
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H122.66
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H310.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G917.06
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H212.98
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H416.51
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D810.20
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D911.56
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B311.20
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B78.61
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.18
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.73
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.22
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A220.13
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I916.68
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A115.80
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C19.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E17.74
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C510.31
Mouse Granule cells, donor1.CNhs12131.11713-123C35.66
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C77.20
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.97
Mouse Microglia, donor1.CNhs12629.11718-123C84.79
Mouse Microglia, donor2.CNhs12634.11736-123E86.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.80
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.84
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.30
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.78
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.36
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.09
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.75
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.67
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.96
Mouse Schwann, donor1.CNhs12507.11728-123D98.18
Mouse Schwann, donor2.CNhs12573.11746-123F98.16
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G37.83
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C47.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.40
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.15
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.03
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I77.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E311.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I88.83
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G614.65
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B642.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.20
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.31
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G37.08
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.51
accessory axillary lymph node, adult.CNhs10475.1063-29H95.96
adrenal gland, adult.CNhs10508.49-24D75.49
adrenal gland, embryo E14.CNhs11038.406-44C55.03
adrenal gland, embryo E16.CNhs11004.1254-43D65.48
adrenal gland, embryo E17.CNhs11043.1263-45I13.23
adrenal gland, embryo E18.CNhs11026.1262-18F56.18
adrenal gland, neonate N00.CNhs11191.1311-23C18.47
adrenal gland, neonate N25.CNhs11223.1377-27I36.28
amnion, adult pregnant day17.5.CNhs10488.583-22A87.42
aorta, adult.CNhs10498.46-23H14.48
bone (os femoris), adult.CNhs10483.56-12G211.50
bone (os femoris), neonate N02.CNhs11227.1985-43F513.43
bone (os femoris), neonate N16.CNhs11225.1525-43A610.38
bone (os femoris), neonate N20.CNhs11195.1350-25C311.15
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B24.68
cerebellum, neonate N30.CNhs11135.1395-42I22.51
colon, adult.CNhs10468.36-18H77.15
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C711.02
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D49.53
corpora quadrigemina, adult.CNhs10501.16-22A42.10
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F13.14
cortex, adult.CNhs10473.12-14D55.04
cortex, neonate N30.CNhs11107.1392-42F23.84
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B24.70
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.88
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.09
epididymis, adult.CNhs10490.58-23B28.09
eyeball, adult.CNhs10484.31-12G46.52
eyeball, embryo E12.CNhs11016.345-16C63.77
eyeball, embryo E14.CNhs10521.399-16E25.29
eyeball, embryo E15.CNhs10593.426-16C96.84
eyeball, embryo E17.CNhs11023.1261-18D46.78
eyeball, neonate N00.CNhs11207.633-15C67.48
eyeball, neonate N01.CNhs11140.1532-43E75.25
eyeball, neonate N02.CNhs11205.1551-44G86.09
eyeball, neonate N16.CNhs11188.777-19A25.95
forelimb, embryo E11.CNhs10596.335-25E22.37
forelimb, embryo E12.CNhs10600.359-14H22.84
forelimb, embryo E13.CNhs10589.384-1E24.40
forelimb, embryo E14.CNhs10577.413-26A85.92
forelimb, embryo E15.CNhs11007.437-20E76.12
forelimb, embryo E17.CNhs10598.1517-43C43.83
forelimb, embryo E18.CNhs11008.1520-43B54.53
gonad, embryo E13.CNhs11044.1564-45I66.57
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.18
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D58.81
heart, embryo E11.CNhs10586.331-24E97.04
heart, embryo E12.CNhs11015.353-12F55.39
heart, embryo E13.CNhs11013.376-3I96.84
heart, embryo E14.CNhs10597.403-26D49.71
heart, embryo E15.CNhs11017.431-16C87.28
heart, embryo E16.CNhs11021.457-17C66.94
heart, embryo E17.CNhs11025.479-18E55.12
heart, embryo E18.CNhs11030.1283-20G38.58
heart, neonate N00.CNhs11213.639-21E312.49
heart, neonate N03.CNhs11221.1349-25I29.22
heart, neonate N10.CNhs11118.749-24G19.69
heart, neonate N16.CNhs11209.782-15G110.78
heart, neonate N20.CNhs11127.821-26I67.75
heart, neonate N25.CNhs11196.1351-25D36.37
heart, neonate N30.CNhs11202.1390-42D211.81
hippocampus, adult.CNhs10478.13-16E83.57
hippocampus, neonate N00.CNhs11228.627-43G13.81
intestinal mucosa, adult.CNhs10506.860-29I32.97
intestine, adult.CNhs10496.178-9A33.17
intestine, embryo E12.CNhs11019.1251-16I56.83
intestine, embryo E13.CNhs11010.381-16D55.81
intestine, embryo E15.CNhs10602.976-16D85.80
intestine, embryo E16.CNhs10585.463-22H46.45
intestine, embryo E17.CNhs10582.482-18D34.67
intestine, embryo E18.CNhs10526.1289-20F74.57
intestine, neonate N00.CNhs11126.644-26D15.22
intestine, neonate N01.CNhs11192.1322-23E96.59
intestine, neonate N06.CNhs11102.688-20B87.54
intestine, neonate N07.CNhs11095.720-20F27.36
intestine, neonate N10.CNhs11098.755-23A56.82
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E34.11
intestine, neonate N30.CNhs11131.1384-42G12.99
kidney, embryo E14.CNhs10606.411-4I94.93
kidney, embryo E15.CNhs10997.434-16F84.00
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I25.50
kidney, embryo E18.CNhs11001.1288-20C75.43
kidney, neonate N00.CNhs11214.646-21G77.36
kidney, neonate N10.CNhs11206.758-6D57.59
kidney, neonate N20.CNhs11113.832-19I15.31
kidney, neonate N25.CNhs11122.1353-25F35.81
kidney, neonate N30.CNhs11203.1385-42H17.28
liver, adult pregnant day01.CNhs10466.508-5B25.93
liver, embryo E12.CNhs10601.355-15F86.01
liver, embryo E13.CNhs10524.378-3H68.65
liver, embryo E14.CNhs10594.409-16E17.42
liver, embryo E15.CNhs10520.433-16D710.75
liver, embryo E16.CNhs10523.462-17F510.61
liver, embryo E17.CNhs10510.481-18A37.64
liver, embryo E18.CNhs10579.499-43G48.92
liver, neonate N00.CNhs11117.641-24F49.57
liver, neonate N03.CNhs11123.1345-25G25.77
liver, neonate N06.CNhs11101.684-20A823.00
liver, neonate N07.CNhs11103.716-20H27.07
liver, neonate N10.CNhs11115.751-24B95.62
liver, neonate N20.CNhs11220.823-25A33.28
liver, neonate N25.CNhs11198.1368-26H15.38
liver, neonate N30.CNhs11106.1382-42D14.82
lung, adult.CNhs10474.28-22B17.94
lung, embryo E12.CNhs10522.354-16G24.17
lung, embryo E14.CNhs10604.404-26F84.73
lung, embryo E15.CNhs11020.432-17C54.41
lung, embryo E16.CNhs10998.458-17B65.63
lung, embryo E17.CNhs10605.480-44A64.69
lung, embryo E18.CNhs10583.1287-20I66.67
lung, neonate N00.CNhs11224.640-42C612.68
lung, neonate N06.CNhs11212.683-20E58.99
lung, neonate N07.CNhs11111.715-19A36.20
lung, neonate N10.CNhs11219.750-23E67.97
lung, neonate N20.CNhs11109.822-18A46.55
lung, neonate N25.CNhs11119.1359-25C79.15
lung, neonate N30.CNhs11133.1394-42H27.67
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A115.08
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A111.97
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H24.41
medulla oblongata, adult.CNhs10477.17-12C23.05
medulla oblongata, neonate N30.CNhs11200.1396-42A34.92
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.70
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C29.09
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.29
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.89
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.45
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.79
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.66
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.26
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.93
olfactory brain, adult.CNhs10489.18-22I95.14
ovary, adult.CNhs10507.91-2I77.95
ovary, embryo E18.CNhs11040.505-44H73.92
ovary, neonate N00.CNhs11217.1299-22I49.94
oviduct, adult pregnant day01.CNhs10500.988-6G65.77
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F47.77
pancreas, embryo E15.CNhs11042.1556-45F25.44
pancreas, embryo E16.CNhs11003.460-26E55.47
pancreas, embryo E17.CNhs10599.1558-45G36.20
pancreas, embryo E18.CNhs10580.1535-43I74.92
pancreas, neonate N00.CNhs11105.645-26G98.27
pancreas, neonate N01.CNhs11138.1531-43D78.00
pancreas, neonate N02.CNhs11139.1539-43D86.42
pancreas, neonate N16.CNhs11136.787-43B66.00
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G86.47
pituitary gland, embryo E12.CNhs11018.346-16E66.66
pituitary gland, embryo E13.CNhs11009.370-44C77.24
pituitary gland, embryo E14.CNhs11037.398-44A56.86
pituitary gland, embryo E15.CNhs10592.427-16B910.11
pituitary gland, embryo E16.CNhs11036.449-43F66.96
pituitary gland, embryo E17.CNhs11039.1265-44F57.73
pituitary gland, neonate N00.CNhs11190.1308-22E99.74
placenta, adult pregnant day10.CNhs10472.539-13I79.62
placenta, adult pregnant day17.CNhs10464.577-18G310.17
prostate, adult.CNhs10470.859-1F85.73
skin, adult.CNhs10492.30-1C36.43
skin, neonate N00.CNhs11124.650-25G47.59
skin, neonate N03.CNhs11215.662-22H35.67
skin, neonate N06.CNhs11097.693-20I55.37
skin, neonate N10.CNhs11108.762-6C44.92
small intestine, neonate N16.CNhs11114.790-21I14.96
spinal cord, adult.CNhs10505.24-13C95.01
spleen, adult.CNhs10465.25-2G211.11
spleen, embryo E16.CNhs11035.461-43C13.10
spleen, embryo E18.CNhs11011.1271-21F24.44
spleen, neonate N10.CNhs11116.752-24D111.11
spleen, neonate N20.CNhs11112.824-19H19.16
spleen, neonate N25.CNhs11099.1354-25G39.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C617.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C916.09
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D316.72
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E36.96
stomach, embryo E15.CNhs10603.1252-16G86.30
stomach, embryo E16.CNhs11022.459-17D46.91
stomach, embryo E17.CNhs11006.1035-18D56.48
stomach, embryo E18.CNhs10999.1286-20C64.80
stomach, neonate N03.CNhs11193.1340-24B87.69
stomach, neonate N07.CNhs11210.718-18A97.93
stomach, neonate N25.CNhs11104.1355-25E44.45
stomach, neonate N30.CNhs11134.1386-42I15.57
submandibular gland, adult.CNhs10469.59-29C17.46
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F54.93
testis, embryo E15.CNhs11034.443-27C54.96
testis, embryo E16.CNhs11033.470-26G57.58
testis, embryo E17.CNhs11029.486-18I56.72
testis, embryo E18.CNhs11027.503-18G56.76
testis, neonate N00.CNhs11189.1300-22B79.39
testis, neonate N07.CNhs11222.726-26I47.68
testis, neonate N10.CNhs11204.763-44D96.19
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E24.32
thymus, adult.CNhs10471.38-12B57.90
thymus, embryo E14.CNhs11041.402-44I46.28
thymus, embryo E15.CNhs11005.430-45I24.62
thymus, embryo E16.CNhs11002.456-26C54.94
thymus, embryo E17.CNhs10581.478-18C15.55
thymus, embryo E18.CNhs10595.1273-19G45.56
thymus, neonate N02.CNhs11181.1541-43F88.29
thymus, neonate N03.CNhs11137.2104-43C77.38
thymus, neonate N06.CNhs11197.681-26C44.24
thymus, neonate N07.CNhs11211.713-19D36.48
thymus, neonate N10.CNhs11194.748-24E48.97
thymus, neonate N20.CNhs11186.820-7A27.70
thymus, neonate N25.CNhs11125.1362-25G77.22
thymus, neonate N30.CNhs11132.1393-42G212.39
tongue, adult.CNhs10499.32-1B46.80
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H38.21
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.92
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G57.72
urinary bladder, adult.CNhs10481.879-12E46.18
uterus, adult pregnant day19.CNhs10497.590-15F57.88
uterus, adult.CNhs10509.92-27E58.97
vagina, adult.CNhs10502.89-27D56.22
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.84
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I82.70
whole body, embryo E12.CNhs10587.857-27C97.18
whole body, embryo E13.CNhs10512.372-23H26.32
whole body, embryo E14.5.CNhs10578.420-27D25.35
whole body, embryo E14.CNhs10519.395-14B15.03
whole body, embryo E16.CNhs10514.453-14F25.70
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.42
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.90
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.36
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.37
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.50
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.44
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.70
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.06
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.95
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.25
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.64
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.44
whole body, embryo E17.5.CNhs10513.490-9F96.75
whole body, embryo E17.CNhs10517.475-3I55.00
whole body, embryo E18.CNhs10516.493-3B36.32
whole body, neonate N00.CNhs10525.657-19C27.74
whole body, neonate N01.CNhs10576.659-23C69.37
whole body, neonate N06.CNhs10515.692-21D19.71
whole body, neonate N10.CNhs10518.761-6B410.20





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
lateral plate mesoderm3.97e-0987
musculoskeletal system4.13e-0932
mesoderm7.06e-09120
mesoderm-derived structure7.06e-09120
presumptive mesoderm7.06e-09120
connective tissue1.82e-0746
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