FFCP PHASE1:Mm9::chr4:155221502..155221576,+: Difference between revisions
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{{FFCP|EntrezGene=13542|HGNC=|MCL_coexpression_id=616|UniProt=P51141,Q3TRW4,Q571M1|association_with_transcript=0bp_to_ENSMUST00000030948,ENSMUST00000156997,ENSMUST00000168552,NM_010091,uc008wfb.1,uc008wfc.1,uc008wfd.1,uc012dra.1_5end|description=CAGE_peak_1_at_Dvl1_5end|id=chr4:155221502..155221576,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.33e-09!73;UBERON:0005743!1.33e-09!73;UBERON:0000073!1.54e-09!75;UBERON:0001016!1.54e-09!75;UBERON:0001049!1.08e-07!52;UBERON:0005068!1.08e-07!52;UBERON:0006241!1.08e-07!52;UBERON:0007135!1.08e-07!52;UBERON:0000344!3.99e-07!15;UBERON:0000955!5.58e-07!50;UBERON:0006238!5.58e-07!50;UBERON:0002616!9.36e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.33e-09,73;UBERON:0001016,1.54e-09,75;UBERON:0000073,3.24e-08,54;UBERON:0004121,5.22e-08,95;UBERON:0000924,5.22e-08,95;UBERON:0006601,5.22e-08,95;UBERON:0001049,1.08e-07,52;UBERON:0005068,1.08e-07,52;UBERON:0006241,1.08e-07,52;UBERON:0007135,1.08e-07,52;UBERON:0000344,3.99e-07,15|phase1_expression=25.623815536767,101.202868215415,106.014822777762,163.935602528302,186.834107269987,55.4001597309236,50.9275556498246,28.2780078337052,33.5077158720967,34.1734208430111,26.3675671067278,24.8091414475496,22.7696970808504,26.6632227377942,18.3210368998615,19.2351504020335,25.1842276126133,20.5050407482854,16.8650753335059,19.9463136345074,46.4336364224841,14.7943517289319,15.4107875591972,35.3583254373429,38.0819406571502,76.3728512272977,47.3838195774982,42.663304071806,32.4940047270399,34.0240675175907,27.9380443425684,34.9266870402797,45.5147942812582,15.8481681015439,28.0186071158736,24.2702582223399,32.2587582894543,28.0416192593728,20.3147189576188,17.7998072951091,39.411509698078,32.1031377930469,20.3914348273085,11.8343008897043,12.9762471960979,10.8292583775392,25.8189143634853,41.8608300250457,53.3837424044767,60.0788388139536,29.9570942278276,38.8131923785423,28.8586082419307,26.8383992544197,28.9040667262519,23.9251275513431,25.5014761545493,23.7209162447623,31.1567349723781,30.1524858185059,35.494558596346,16.2645375393183,18.6751907183339,28.3468410943641,11.8663963508037,28.419204597844,29.0612107202853,31.5059010363675,26.6482303632788,20.1158848114219,24.1873705554089,34.849420097264,32.4676755198872,20.7009450673272,23.5779858704861,16.5459381589804,40.7428759697738,29.240400421508,29.03163478543,35.2136388239618,33.3929899148795,32.2966289745191,39.3648028591947,31.5147061617741,34.6852022453359,35.0608016713665,31.1793980950035,33.7382996943794,26.731346246614,22.898182712356,20.8702431865208,49.044160987939,38.7583660213418,38.318926606285,35.0879265421741,34.0500434193975,44.2399923415018,19.4290567738986,18.1850203222008,21.5537140451308,21.4081998060554,15.3991772897181,15.2883143823987,0,28.1438353314578,29.1363845296363,18.704404465547,37.6806803072898,6.21450920753212,21.9694365815941,20.471268558404,19.485790611977,17.7573932887165,14.4693734930518,18.4614270203057,21.3633205260448,41.7759495471092,15.7613299042704,28.307537662396,38.0152097376412,38.2055826936481,27.1530141755724,26.0948465705371,52.4077626650669,50.0577629284158,33.4648742323255,9.4653948359677,8.39863823390771,6.73472203487243,32.953940669061,25.6200337578431,33.1727489577962,33.0266208365325,33.243009452943,29.298114282898,32.4482526135515,21.895463227818,26.3742777693397,25.7777213602348,22.0963948680798,16.0048144844126,18.8519725635448,14.5850325142333,21.4000841326715,26.0579791749586,18.0640345601638,30.078253583673,26.3877438153796,10.1316956678436,11.7245769704048,12.6684809398043,20.8235945806196,21.1315909411454,22.984642990463,23.0475992776897,14.7285357445685,3.51106593656617,6.69104558498259,9.66155897945015,10.7705401718461,11.4917769390737,9.90341338035582,10.8902578369197,12.199382368339,13.884040159864,16.2773761325285,19.3156849007726,14.0118410840603,20.0763016894446,19.3717607613332,22.456060244202,27.3393976485371,21.0768110679409,26.8412837520744,26.49653351908,27.7842453424068,44.2761169198289,35.965277066242,13.2238715331845,18.3466970769746,15.7218302812954,20.3700359869576,15.3440850252961,20.3541419940438,31.7934471234823,12.3524216043008,24.3795152536261,18.502951899827,25.3453313254856,22.4704852163555,28.0979464837102,31.0660386276813,15.5527678781527,15.3093006897037,21.4144697778853,17.1067115390064,22.8863934857798,24.5475369616115,27.5711301861762,32.0314021115737,32.0277404796405,41.9550357334122,45.0607993172466,12.5133829287071,17.6903095601883,18.438693215558,15.0116489827492,18.8118184606885,22.9163266603278,21.5772103088108,20.4290385736545,18.1210532704134,27.3159592401974,25.3055844414582,30.2676542921124,45.7167769084272,38.9292387342549,45.8321345295199,20.8771104888263,13.6433816474749,12.0594082567099,17.9929790921699,16.4283173801951,15.5780819420889,17.853273066451,34.928922966546,15.1329738341943,16.1669223443606,29.0207678956627,25.7265404103709,24.00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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13542 | |||
|HGNC= | |||
|MCL_coexpression_id=616 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P51141,uniprot:Q3TRW4,uniprot:Q571M1 | |||
|association_with_transcript=0bp_to_ENSMUST00000030948,ENSMUST00000156997,ENSMUST00000168552,NM_010091,uc008wfb.1,uc008wfc.1,uc008wfd.1,uc012dra.1_5end | |||
|cluster_id=chr4:155221502..155221576,+ | |||
|description=CAGE_peak_1_at_Dvl1_5end | |||
|id=chr4:155221502..155221576,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.33e-09!73;UBERON:0005743!1.33e-09!73;UBERON:0000073!1.54e-09!75;UBERON:0001016!1.54e-09!75;UBERON:0001049!1.08e-07!52;UBERON:0005068!1.08e-07!52;UBERON:0006241!1.08e-07!52;UBERON:0007135!1.08e-07!52;UBERON:0000344!3.99e-07!15;UBERON:0000955!5.58e-07!50;UBERON:0006238!5.58e-07!50;UBERON:0002616!9.36e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.33e-09,73;UBERON:0001016,1.54e-09,75;UBERON:0000073,3.24e-08,54;UBERON:0004121,5.22e-08,95;UBERON:0000924,5.22e-08,95;UBERON:0006601,5.22e-08,95;UBERON:0001049,1.08e-07,52;UBERON:0005068,1.08e-07,52;UBERON:0006241,1.08e-07,52;UBERON:0007135,1.08e-07,52;UBERON:0000344,3.99e-07,15 | |||
|phase1_expression=25.623815536767,101.202868215415,106.014822777762,163.935602528302,186.834107269987,55.4001597309236,50.9275556498246,28.2780078337052,33.5077158720967,34.1734208430111,26.3675671067278,24.8091414475496,22.7696970808504,26.6632227377942,18.3210368998615,19.2351504020335,25.1842276126133,20.5050407482854,16.8650753335059,19.9463136345074,46.4336364224841,14.7943517289319,15.4107875591972,35.3583254373429,38.0819406571502,76.3728512272977,47.3838195774982,42.663304071806,32.4940047270399,34.0240675175907,27.9380443425684,34.9266870402797,45.5147942812582,15.8481681015439,28.0186071158736,24.2702582223399,32.2587582894543,28.0416192593728,20.3147189576188,17.7998072951091,39.411509698078,32.1031377930469,20.3914348273085,11.8343008897043,12.9762471960979,10.8292583775392,25.8189143634853,41.8608300250457,53.3837424044767,60.0788388139536,29.9570942278276,38.8131923785423,28.8586082419307,26.8383992544197,28.9040667262519,23.9251275513431,25.5014761545493,23.7209162447623,31.1567349723781,30.1524858185059,35.494558596346,16.2645375393183,18.6751907183339,28.3468410943641,11.8663963508037,28.419204597844,29.0612107202853,31.5059010363675,26.6482303632788,20.1158848114219,24.1873705554089,34.849420097264,32.4676755198872,20.7009450673272,23.5779858704861,16.5459381589804,40.7428759697738,29.240400421508,29.03163478543,35.2136388239618,33.3929899148795,32.2966289745191,39.3648028591947,31.5147061617741,34.6852022453359,35.0608016713665,31.1793980950035,33.7382996943794,26.731346246614,22.898182712356,20.8702431865208,49.044160987939,38.7583660213418,38.318926606285,35.0879265421741,34.0500434193975,44.2399923415018,19.4290567738986,18.1850203222008,21.5537140451308,21.4081998060554,15.3991772897181,15.2883143823987,0,28.1438353314578,29.1363845296363,18.704404465547,37.6806803072898,6.21450920753212,21.9694365815941,20.471268558404,19.485790611977,17.7573932887165,14.4693734930518,18.4614270203057,21.3633205260448,41.7759495471092,15.7613299042704,28.307537662396,38.0152097376412,38.2055826936481,27.1530141755724,26.0948465705371,52.4077626650669,50.0577629284158,33.4648742323255,9.4653948359677,8.39863823390771,6.73472203487243,32.953940669061,25.6200337578431,33.1727489577962,33.0266208365325,33.243009452943,29.298114282898,32.4482526135515,21.895463227818,26.3742777693397,25.7777213602348,22.0963948680798,16.0048144844126,18.8519725635448,14.5850325142333,21.4000841326715,26.0579791749586,18.0640345601638,30.078253583673,26.3877438153796,10.1316956678436,11.7245769704048,12.6684809398043,20.8235945806196,21.1315909411454,22.984642990463,23.0475992776897,14.7285357445685,3.51106593656617,6.69104558498259,9.66155897945015,10.7705401718461,11.4917769390737,9.90341338035582,10.8902578369197,12.199382368339,13.884040159864,16.2773761325285,19.3156849007726,14.0118410840603,20.0763016894446,19.3717607613332,22.456060244202,27.3393976485371,21.0768110679409,26.8412837520744,26.49653351908,27.7842453424068,44.2761169198289,35.965277066242,13.2238715331845,18.3466970769746,15.7218302812954,20.3700359869576,15.3440850252961,20.3541419940438,31.7934471234823,12.3524216043008,24.3795152536261,18.502951899827,25.3453313254856,22.4704852163555,28.0979464837102,31.0660386276813,15.5527678781527,15.3093006897037,21.4144697778853,17.1067115390064,22.8863934857798,24.5475369616115,27.5711301861762,32.0314021115737,32.0277404796405,41.9550357334122,45.0607993172466,12.5133829287071,17.6903095601883,18.438693215558,15.0116489827492,18.8118184606885,22.9163266603278,21.5772103088108,20.4290385736545,18.1210532704134,27.3159592401974,25.3055844414582,30.2676542921124,45.7167769084272,38.9292387342549,45.8321345295199,20.8771104888263,13.6433816474749,12.0594082567099,17.9929790921699,16.4283173801951,15.5780819420889,17.853273066451,34.928922966546,15.1329738341943,16.1669223443606,29.0207678956627,25.7265404103709,24.0032124793595,23.5777965487864,12.0633027151418,11.9659250440116,26.555270743028,23.4546234359023,33.8761744874241,33.5225423653701,7.37707254195039,67.4097375635676,22.085575359138,18.350620981942,22.8348801596767,21.5071918157297,24.0622568008986,28.0245765480944,27.1223170122179,30.9791209385991,20.9502522311657,31.4894890093371,22.5684735481147,26.1756437390865,21.6639655940256,24.7455184458803,45.1333470355874,13.595715624679,17.5347663039556,21.5009790921724,31.3020006453619,33.817866273832,32.3035366460276,28.3556308992454,23.8853243517763,40.4527050157844,52.7093042874994,57.7559042189846,27.235168460303,18.3662315911936,26.3891714916819,27.4351404840438,21.8128487379996,28.7173796339334,28.7960786053712,29.2286351150015,14.0803024838226,23.3015277950202,30.4329189315847,26.2169142176953,17.4381580831578,18.0938774784468,23.1582347366085,22.6514441648185,25.0673519501672,30.9660254357551,16.0618627949982,14.859854493352,11.6672552242918,16.3880557594081,14.3528939107076,16.0144721244566,13.5982743995084,16.2343684695443,16.5839968565309,35.3228128665592,11.704431762502,17.485474172909,19.2249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| |||
|short_description=p1@Dvl1 | |||
}} |
Revision as of 07:37, 5 August 2015
Short description: | p1@Dvl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dvl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:616 |
Association with transcript: | 0bp_to_ENSMUST00000030948, ENSMUST00000156997, ENSMUST00000168552, NM_010091, uc008wfb.1, uc008wfc.1, uc008wfd.1, uc012dra.1_5end |
EntrezGene: | 13542 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.33e-09 | 73 |
nervous system | 1.54e-09 | 75 |
regional part of nervous system | 3.24e-08 | 54 |
ectoderm-derived structure | 5.22e-08 | 95 |
ectoderm | 5.22e-08 | 95 |
presumptive ectoderm | 5.22e-08 | 95 |
neural tube | 1.08e-07 | 52 |
neural rod | 1.08e-07 | 52 |
future spinal cord | 1.08e-07 | 52 |
neural keel | 1.08e-07 | 52 |
mucosa | 3.99e-07 | 15 |