FFCP PHASE1:Mm9::chr17:71340057..71340067,-: Difference between revisions
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{{FFCP|EntrezGene=67938|HGNC=|MCL_coexpression_id=52|UniProt=Q3THE2|association_with_transcript=59bp_to_ENSMUST00000038446_5end|description=CAGE_peak_6_at_Myl12b_5end|id=chr17:71340057..71340067,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002293,1.02e-33,3;CL:0000192,1.69e-33,3;CL:0000359,1.69e-33,3;CL:0002539,1.69e-33,3;CL:0000514,1.69e-33,3;CL:0000680,3.63e-17,6;CL:0000187,3.63e-17,6;CL:0000056,3.63e-17,6;CL:0000222,8.03e-15,7;CL:0000355,1.10e-11,9;CL:0002076,2.64e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.69e-33,3;UBERON:0004237,1.69e-33,3;UBERON:0004695,1.69e-33,3;UBERON:0002111,1.69e-33,3;UBERON:0004178,1.69e-33,3;UBERON:0000947,2.41e-25,4;UBERON:0001637,2.41e-25,4;UBERON:0004573,2.41e-25,4;UBERON:0003509,2.41e-25,4;UBERON:0004571,2.41e-25,4;UBERON:0010191,2.41e-25,4;UBERON:0004572,2.41e-25,4;UBERON:0000055,1.92e-20,5;UBERON:0007500,1.92e-20,5;UBERON:0001981,1.92e-20,5;UBERON:0002049,1.92e-20,5;UBERON:0007798,1.92e-20,5;UBERON:0004537,1.92e-20,5;UBERON:0006965,1.92e-20,5;UBERON:0001134,1.10e-11,9;UBERON:0002036,1.10e-11,9;UBERON:0002385,1.10e-11,9;UBERON:0000486,1.10e-11,9;UBERON:0007503,1.10e-11,9;UBERON:0001015,1.10e-11,9;UBERON:0002329,1.10e-11,9;UBERON:0003082,1.10e-11,9;UBERON:0003059,1.10e-11,9;UBERON:0007282,1.10e-11,9;UBERON:0004290,1.10e-11,9;UBERON:0009618,1.10e-11,9;UBERON:0000383,1.39e-10,10;UBERON:0007524,1.11e-09,11;UBERON:0003077,1.11e-09,11;UBERON:0007285,1.11e-09,11|phase1_expression=0,0.348975407639361,0.454999239389536,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0.319984845586813,0.22940928106717,0,0.430761996159075,0.430942465371778,0.570070258369122,0.504060259519861,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,2.51793635951155,4.25783111121961,1.65192076945513,0,0,0.659058548203415,0.388859798148567,0,0,0,0,0,0.257259436035947,0,0.515672092277442,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0.571301968807607,0,0,0.0958454710182364,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852151612890289,1.55871602761721,1.06001872353102,0.14084341977668,1.28326477414318,5.09610479413291,7.11066703153331,0.216491041011214,0.253359865475099,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0.101839363850316,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0.348252166522167,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0,0,0.379335801906163,0,0,0,0,0.140271639780637,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.37898282354097,0.325929952884052,0,0.234690248288502,0,0.238043640886014,0,0.315270288212382,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0.234423373184406,0,0,0.631016438832513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0.158167996790568,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0.221985953374065,0,0,0,0.187682475451182,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0,0,0,0.209613162627982,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0.561142271657738,0,0,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p6@Myl12b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:67938 | |||
|HGNC= | |||
|MCL_coexpression_id=52 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3THE2 | |||
|association_with_transcript=59bp_to_ENSMUST00000038446_5end | |||
|cluster_id=chr17:71340057..71340067,- | |||
|description=CAGE_peak_6_at_Myl12b_5end | |||
|id=chr17:71340057..71340067,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002293,1.02e-33,3;CL:0000192,1.69e-33,3;CL:0000359,1.69e-33,3;CL:0002539,1.69e-33,3;CL:0000514,1.69e-33,3;CL:0000680,3.63e-17,6;CL:0000187,3.63e-17,6;CL:0000056,3.63e-17,6;CL:0000222,8.03e-15,7;CL:0000355,1.10e-11,9;CL:0002076,2.64e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.69e-33,3;UBERON:0004237,1.69e-33,3;UBERON:0004695,1.69e-33,3;UBERON:0002111,1.69e-33,3;UBERON:0004178,1.69e-33,3;UBERON:0000947,2.41e-25,4;UBERON:0001637,2.41e-25,4;UBERON:0004573,2.41e-25,4;UBERON:0003509,2.41e-25,4;UBERON:0004571,2.41e-25,4;UBERON:0010191,2.41e-25,4;UBERON:0004572,2.41e-25,4;UBERON:0000055,1.92e-20,5;UBERON:0007500,1.92e-20,5;UBERON:0001981,1.92e-20,5;UBERON:0002049,1.92e-20,5;UBERON:0007798,1.92e-20,5;UBERON:0004537,1.92e-20,5;UBERON:0006965,1.92e-20,5;UBERON:0001134,1.10e-11,9;UBERON:0002036,1.10e-11,9;UBERON:0002385,1.10e-11,9;UBERON:0000486,1.10e-11,9;UBERON:0007503,1.10e-11,9;UBERON:0001015,1.10e-11,9;UBERON:0002329,1.10e-11,9;UBERON:0003082,1.10e-11,9;UBERON:0003059,1.10e-11,9;UBERON:0007282,1.10e-11,9;UBERON:0004290,1.10e-11,9;UBERON:0009618,1.10e-11,9;UBERON:0000383,1.39e-10,10;UBERON:0007524,1.11e-09,11;UBERON:0003077,1.11e-09,11;UBERON:0007285,1.11e-09,11 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0.319984845586813,0.22940928106717,0,0.430761996159075,0.430942465371778,0.570070258369122,0.504060259519861,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,2.51793635951155,4.25783111121961,1.65192076945513,0,0,0.659058548203415,0.388859798148567,0,0,0,0,0,0.257259436035947,0,0.515672092277442,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0.571301968807607,0,0,0.0958454710182364,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852151612890289,1.55871602761721,1.06001872353102,0.14084341977668,1.28326477414318,5.09610479413291,7.11066703153331,0.216491041011214,0.253359865475099,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0.101839363850316,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0.348252166522167,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0,0,0.379335801906163,0,0,0,0,0.140271639780637,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.37898282354097,0.325929952884052,0,0.234690248288502,0,0.238043640886014,0,0.315270288212382,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0.234423373184406,0,0,0.631016438832513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0.158167996790568,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0.221985953374065,0,0,0,0.187682475451182,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0,0,0,0.209613162627982,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0.561142271657738,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p6@Myl12b | |||
}} |
Revision as of 07:12, 5 August 2015
Short description: | p6@Myl12b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Myl12b_5end |
Coexpression cluster: | MCL_coexpression_mm9:52 |
Association with transcript: | 59bp_to_ENSMUST00000038446_5end |
EntrezGene: | 67938 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of thymus | 1.02e-33 | 3 |
smooth muscle cell | 1.69e-33 | 3 |
vascular associated smooth muscle cell | 1.69e-33 | 3 |
aortic smooth muscle cell | 1.69e-33 | 3 |
smooth muscle myoblast | 1.69e-33 | 3 |
muscle precursor cell | 3.63e-17 | 6 |
muscle cell | 3.63e-17 | 6 |
myoblast | 3.63e-17 | 6 |
mesodermal cell | 8.03e-15 | 7 |
multi-potent skeletal muscle stem cell | 1.10e-11 | 9 |
endo-epithelial cell | 2.64e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 1.69e-33 | 3 |
blood vessel smooth muscle | 1.69e-33 | 3 |
arterial system smooth muscle | 1.69e-33 | 3 |
artery smooth muscle tissue | 1.69e-33 | 3 |
aorta smooth muscle tissue | 1.69e-33 | 3 |
aorta | 2.41e-25 | 4 |
artery | 2.41e-25 | 4 |
systemic artery | 2.41e-25 | 4 |
arterial blood vessel | 2.41e-25 | 4 |
systemic arterial system | 2.41e-25 | 4 |
aortic system | 2.41e-25 | 4 |
arterial system | 2.41e-25 | 4 |
vessel | 1.92e-20 | 5 |
epithelial tube open at both ends | 1.92e-20 | 5 |
blood vessel | 1.92e-20 | 5 |
vasculature | 1.92e-20 | 5 |
vascular system | 1.92e-20 | 5 |
blood vasculature | 1.92e-20 | 5 |
vascular cord | 1.92e-20 | 5 |
skeletal muscle tissue | 1.10e-11 | 9 |
striated muscle tissue | 1.10e-11 | 9 |
muscle tissue | 1.10e-11 | 9 |
multilaminar epithelium | 1.10e-11 | 9 |
epithelial vesicle | 1.10e-11 | 9 |
musculature | 1.10e-11 | 9 |
somite | 1.10e-11 | 9 |
myotome | 1.10e-11 | 9 |
presomitic mesoderm | 1.10e-11 | 9 |
presumptive segmental plate | 1.10e-11 | 9 |
dermomyotome | 1.10e-11 | 9 |
trunk paraxial mesoderm | 1.10e-11 | 9 |
musculature of body | 1.39e-10 | 10 |
dense mesenchyme tissue | 1.11e-09 | 11 |
paraxial mesoderm | 1.11e-09 | 11 |
presumptive paraxial mesoderm | 1.11e-09 | 11 |