FFCP PHASE1:Mm9::chr9:48212007..48212021,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=130|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:48212007..48212021,+|id=chr9:48212007..48212021,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000049,6.12e-24,19;CL:0000557,4.54e-17,7;CL:0000988,2.40e-14,32;CL:0002032,2.40e-14,32;CL:0000037,2.40e-14,32;CL:0000837,2.40e-14,32;CL:0002320,4.79e-10,46;CL:0000134,4.79e-10,46;CL:0000219,1.40e-08,54;CL:0000763,7.36e-08,16|ontology_enrichment_disease=DOID:0060100!1.24e-08!3;DOID:4045!1.24e-08!3|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007823!1.74e-12!5;UBERON:0000981!2.32e-10!4;UBERON:0002495!2.32e-10!4;UBERON:0003608!2.32e-10!4;UBERON:0003826!2.32e-10!4;UBERON:0008202!2.32e-10!4;UBERON:0004375!2.32e-10!4;UBERON:0002428!2.32e-10!4;UBERON:0003464!2.32e-10!4;UBERON:0003606!2.32e-10!4;UBERON:0009749!2.32e-10!4;UBERON:0003860!2.32e-10!4;UBERON:0005856!2.32e-10!4;UBERON:0005866!2.32e-10!4;UBERON:0007828!2.32e-10!4;UBERON:0005254!2.32e-10!4;UBERON:0001271!2.32e-10!4;UBERON:0002091!2.32e-10!4;UBERON:0001464!2.32e-10!4;UBERON:0003285!2.32e-10!4;UBERON:0010129!2.32e-10!4;UBERON:0006234!2.32e-10!4;UBERON:0002529!2.40e-10!6;UBERON:0002106!5.42e-10!6;UBERON:0004457!5.42e-10!6;UBERON:0000042!5.42e-10!6;UBERON:0004854!5.42e-10!6;UBERON:0009034!5.42e-10!6;UBERON:0002095!5.42e-10!6;UBERON:0004782!5.42e-10!6;UBERON:0003281!5.42e-10!6;UBERON:0009664!5.42e-10!6;UBERON:0002296!5.42e-10!6;UBERON:0005602!5.42e-10!6;UBERON:0001179!5.42e-10!6;UBERON:0006293!5.42e-10!6;UBERON:0000914!1.91e-08!17;UBERON:0003887!2.16e-08!10;UBERON:0005418!2.74e-08!5;UBERON:0002472!2.74e-08!5;UBERON:0008784!2.74e-08!5;UBERON:0006058!2.74e-08!5;UBERON:0004709!2.74e-08!5;UBERON:0005420!2.74e-08!5;UBERON:0006057!2.74e-08!5;UBERON:0000978!2.74e-08!5;UBERON:0002103!2.74e-08!5;UBERON:0000376!2.74e-08!5;UBERON:0000154!2.74e-08!5;UBERON:0005730!2.74e-08!5;UBERON:0002204!7.77e-08!32;UBERON:0002405!2.65e-07!70;UBERON:0002193!5.46e-07!48;UBERON:0000075!6.67e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.79e-10,46;UBERON:0001474,1.23e-09,22;UBERON:0004765,1.23e-09,22;UBERON:0001434,1.23e-09,22;UBERON:0002371,7.36e-08,16;UBERON:0002204,9.46e-07,32|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274228867211478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0.7813353445238,0.523523743973798,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,1.76922110389975,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0,3.47463861067169,5.39912457894067,5.84523044536098,0,0,0,0,0,0,0,0,0.622034853050465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.42655824775882,11.0659600059328,9.66155897945015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0.482354319504834,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0.206386867963223,0.370389054739423,0.565105371014073,0.136694227721025,0,0,0,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p@chr9:48212007..48212021,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=130 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:48212007..48212021,+ | |||
|description=CAGE_peak_at_chr9:48212007..48212021,+ | |||
|id=chr9:48212007..48212021,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,6.12e-24,19;CL:0000557,4.54e-17,7;CL:0000988,2.40e-14,32;CL:0002032,2.40e-14,32;CL:0000037,2.40e-14,32;CL:0000837,2.40e-14,32;CL:0002320,4.79e-10,46;CL:0000134,4.79e-10,46;CL:0000219,1.40e-08,54;CL:0000763,7.36e-08,16 | |||
|ontology_enrichment_disease=DOID:0060100!1.24e-08!3;DOID:4045!1.24e-08!3 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007823!1.74e-12!5;UBERON:0000981!2.32e-10!4;UBERON:0002495!2.32e-10!4;UBERON:0003608!2.32e-10!4;UBERON:0003826!2.32e-10!4;UBERON:0008202!2.32e-10!4;UBERON:0004375!2.32e-10!4;UBERON:0002428!2.32e-10!4;UBERON:0003464!2.32e-10!4;UBERON:0003606!2.32e-10!4;UBERON:0009749!2.32e-10!4;UBERON:0003860!2.32e-10!4;UBERON:0005856!2.32e-10!4;UBERON:0005866!2.32e-10!4;UBERON:0007828!2.32e-10!4;UBERON:0005254!2.32e-10!4;UBERON:0001271!2.32e-10!4;UBERON:0002091!2.32e-10!4;UBERON:0001464!2.32e-10!4;UBERON:0003285!2.32e-10!4;UBERON:0010129!2.32e-10!4;UBERON:0006234!2.32e-10!4;UBERON:0002529!2.40e-10!6;UBERON:0002106!5.42e-10!6;UBERON:0004457!5.42e-10!6;UBERON:0000042!5.42e-10!6;UBERON:0004854!5.42e-10!6;UBERON:0009034!5.42e-10!6;UBERON:0002095!5.42e-10!6;UBERON:0004782!5.42e-10!6;UBERON:0003281!5.42e-10!6;UBERON:0009664!5.42e-10!6;UBERON:0002296!5.42e-10!6;UBERON:0005602!5.42e-10!6;UBERON:0001179!5.42e-10!6;UBERON:0006293!5.42e-10!6;UBERON:0000914!1.91e-08!17;UBERON:0003887!2.16e-08!10;UBERON:0005418!2.74e-08!5;UBERON:0002472!2.74e-08!5;UBERON:0008784!2.74e-08!5;UBERON:0006058!2.74e-08!5;UBERON:0004709!2.74e-08!5;UBERON:0005420!2.74e-08!5;UBERON:0006057!2.74e-08!5;UBERON:0000978!2.74e-08!5;UBERON:0002103!2.74e-08!5;UBERON:0000376!2.74e-08!5;UBERON:0000154!2.74e-08!5;UBERON:0005730!2.74e-08!5;UBERON:0002204!7.77e-08!32;UBERON:0002405!2.65e-07!70;UBERON:0002193!5.46e-07!48;UBERON:0000075!6.67e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.79e-10,46;UBERON:0001474,1.23e-09,22;UBERON:0004765,1.23e-09,22;UBERON:0001434,1.23e-09,22;UBERON:0002371,7.36e-08,16;UBERON:0002204,9.46e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274228867211478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0.7813353445238,0.523523743973798,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,1.76922110389975,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0,3.47463861067169,5.39912457894067,5.84523044536098,0,0,0,0,0,0,0,0,0.622034853050465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.42655824775882,11.0659600059328,9.66155897945015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0.482354319504834,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0.206386867963223,0.370389054739423,0.565105371014073,0.136694227721025,0,0,0,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr9:48212007..48212021,+ | |||
}} |
Latest revision as of 06:10, 5 August 2015
Short description: | p@chr9:48212007..48212021, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:48212007..48212021, + |
Coexpression cluster: | MCL_coexpression_mm9:130 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 6.12e-24 | 19 |
granulocyte monocyte progenitor cell | 4.54e-17 | 7 |
hematopoietic cell | 2.40e-14 | 32 |
hematopoietic oligopotent progenitor cell | 2.40e-14 | 32 |
hematopoietic stem cell | 2.40e-14 | 32 |
hematopoietic multipotent progenitor cell | 2.40e-14 | 32 |
connective tissue cell | 4.79e-10 | 46 |
mesenchymal cell | 4.79e-10 | 46 |
motile cell | 1.40e-08 | 54 |
myeloid cell | 7.36e-08 | 16 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.79e-10 | 46 |
bone element | 1.23e-09 | 22 |
skeletal element | 1.23e-09 | 22 |
skeletal system | 1.23e-09 | 22 |
bone marrow | 7.36e-08 | 16 |
musculoskeletal system | 9.46e-07 | 32 |