FFCP PHASE1:Mm9::chr1:172519922..172519985,-: Difference between revisions
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{{FFCP|EntrezGene=70729|HGNC=|MCL_coexpression_id=2|UniProt=E9PYK5,Q9D3A8|association_with_transcript=0bp_to_ENSMUST00000159665,ENSMUST00000161966,NM_001109985,uc007dmg.1,uc007dmh.1,uc011wvt.1_5end|description=CAGE_peak_1_at_Nos1ap_5end|id=chr1:172519922..172519985,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!4.07e-12!122;UBERON:0000025!3.28e-11!114;UBERON:0000955!3.16e-10!50;UBERON:0006238!3.16e-10!50;UBERON:0000033!9.89e-10!63;UBERON:0002616!1.01e-09!49;UBERON:0001049!1.91e-08!52;UBERON:0005068!1.91e-08!52;UBERON:0006241!1.91e-08!52;UBERON:0007135!1.91e-08!52;UBERON:0002791!2.67e-08!29;UBERON:0003528!2.67e-08!29;UBERON:0001893!2.67e-08!29;UBERON:0007023!3.58e-08!51;UBERON:0003080!6.40e-08!40;UBERON:0002021!9.01e-08!10;UBERON:0000411!9.01e-08!10;UBERON:0001950!9.01e-08!10;UBERON:0002020!9.65e-08!34;UBERON:0000956!9.91e-08!21;UBERON:0001869!9.91e-08!21;UBERON:0000203!9.91e-08!21;UBERON:0003056!1.57e-07!49;UBERON:0002780!1.84e-07!39;UBERON:0001890!1.84e-07!39;UBERON:0006240!1.84e-07!39;UBERON:0000481!5.32e-07!230;UBERON:0002619!6.26e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0004111,4.03e-12,122;UBERON:0000025,3.25e-11,114;UBERON:0000073,2.10e-09,54;UBERON:0000955,6.30e-09,47;UBERON:0006238,6.30e-09,47;UBERON:0001049,1.90e-08,52;UBERON:0005068,1.90e-08,52;UBERON:0006241,1.90e-08,52;UBERON:0007135,1.90e-08,52;UBERON:0002616,1.91e-08,46;UBERON:0003528,2.65e-08,29;UBERON:0002791,2.65e-08,29;UBERON:0001893,2.65e-08,29;UBERON:0007023,3.47e-08,51;UBERON:0003080,6.36e-08,40;UBERON:0002021,8.95e-08,10;UBERON:0000411,8.95e-08,10;UBERON:0001950,8.95e-08,10;UBERON:0002020,9.59e-08,34;UBERON:0000956,9.84e-08,21;UBERON:0001869,9.84e-08,21;UBERON:0000203,9.84e-08,21;UBERON:0010314,1.34e-07,92;UBERON:0003056,1.56e-07,49;UBERON:0002780,1.83e-07,39;UBERON:0001890,1.83e-07,39;UBERON:0006240,1.83e-07,39;UBERON:0010371,2.49e-07,73;UBERON:0002346,4.26e-07,64;UBERON:0003075,4.26e-07,64;UBERON:0007284,4.26e-07,64;UBERON:0002619,6.22e-07,17|phase1_expression=13.1322054625931,66.654302859118,67.3398874296513,47.7893453864791,56.6012174839372,17.9630820945722,10.2789561862031,0.129123323441576,0,0,0,0,0,0,14.3237197580735,8.30148596298286,16.7894850750755,0.315462165358238,0.274228867211478,1.27316895539409,16.8385714499118,2.18440092641948,0.522399578277871,8.63959083084396,12.15869189656,37.8993096315913,26.7072437618626,23.7018355954478,17.6721780094428,18.3981994724749,11.5299865540758,4.44521471421742,4.92051830067656,0,2.88851619751275,3.49092755252834,3.87921776898501,28.8786825208466,10.9386948233332,23.5585684788209,28.8233429135197,33.4692287629638,26.2175590636823,2.64383317748712,2.73717714292689,1.10128051297009,1.56478268869608,10.4652075062614,22.6276768216506,13.8045228342741,1.81982348112971,8.62515386189829,0,0.725362142011344,0,1.02903774414379,5.73066879877513,5.15672092277442,8.29497489524351,8.46385566835253,11.4089652631112,2.71075625655306,0.889294796111139,1.7997994345628,2.96659908770092,0.7104801149461,5.39280198933128,9.98967593836042,15.8645106831971,11.340498819862,12.1988477583802,10.8547374073445,6.84692476950002,7.59442955132715,6.61333750025831,11.0306254393203,23.1243350098716,28.8573384072524,23.6554061214615,11.2103344570665,8.32537556781928,6.77187381723788,15.6342479440773,11.2552522006336,24.142123148736,11.7851434189467,11.5321061447273,10.4383689662168,0.454357159999104,0.529000920747499,13.3337664802772,5.16254326188832,30.5987100168488,5.39703191637817,11.0461990966104,13.4408066129201,7.5839986871146,0,0,0,8.73229202615419,8.98285341900225,20.3844191765317,35.5533351576666,2.81438353314578,1.77351905832569,3.0331466700887,12.6744106488157,11.9111426477699,19.1490359393624,5.03107447621794,2.43572382649713,8.53277339847416,4.82312449768392,11.7588707135705,11.0586600370114,21.0115722574218,12.5801440520323,17.6922110389975,7.27950824763341,8.83366073841574,10.1823803158397,9.31958806090611,20.7874365878198,27.2280718857492,22.480220858356,7.18890747035522,4.19931911695385,4.06624726633807,31.7556155538224,42.0900554593136,20.356005042284,70.7464983182565,69.0431734791892,27.6358099264215,33.9084239811613,8.7581852911272,8.08645308965605,6.31806896084187,9.6803253707778,7.93734702072493,8.04657365517155,9.54329287968351,11.6042709733501,12.1104968489364,11.2740073850668,11.9938207436453,12.1590584247337,2.80238390812695,7.18603104637713,15.4836989264275,5.69908904311695,6.67313398141435,5.57203466435466,7.61393904709391,12.5391588095651,0.702213187313235,1.02939162845886,1.42081749697796,24.8550927042602,13.8370375388847,11.3439098720439,17.7558551688908,12.0026181365916,15.5809784016252,11.8592311822708,14.4867636755794,13.3112490298573,14.1521470925593,11.4917224855367,16.7001747664463,10.3801991071986,12.953456802172,16.5073895075257,70.6574227175468,10.496270462687,11.2342386214491,19.3048913664387,11.5175655289026,11.8440702648824,8.89185483122444,9.075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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:70729 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9PYK5,uniprot:Q9D3A8 | |||
|association_with_transcript=0bp_to_ENSMUST00000159665,ENSMUST00000161966,NM_001109985,uc007dmg.1,uc007dmh.1,uc011wvt.1_5end | |||
|cluster_id=chr1:172519922..172519985,- | |||
|description=CAGE_peak_1_at_Nos1ap_5end | |||
|id=chr1:172519922..172519985,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!4.07e-12!122;UBERON:0000025!3.28e-11!114;UBERON:0000955!3.16e-10!50;UBERON:0006238!3.16e-10!50;UBERON:0000033!9.89e-10!63;UBERON:0002616!1.01e-09!49;UBERON:0001049!1.91e-08!52;UBERON:0005068!1.91e-08!52;UBERON:0006241!1.91e-08!52;UBERON:0007135!1.91e-08!52;UBERON:0002791!2.67e-08!29;UBERON:0003528!2.67e-08!29;UBERON:0001893!2.67e-08!29;UBERON:0007023!3.58e-08!51;UBERON:0003080!6.40e-08!40;UBERON:0002021!9.01e-08!10;UBERON:0000411!9.01e-08!10;UBERON:0001950!9.01e-08!10;UBERON:0002020!9.65e-08!34;UBERON:0000956!9.91e-08!21;UBERON:0001869!9.91e-08!21;UBERON:0000203!9.91e-08!21;UBERON:0003056!1.57e-07!49;UBERON:0002780!1.84e-07!39;UBERON:0001890!1.84e-07!39;UBERON:0006240!1.84e-07!39;UBERON:0000481!5.32e-07!230;UBERON:0002619!6.26e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,4.03e-12,122;UBERON:0000025,3.25e-11,114;UBERON:0000073,2.10e-09,54;UBERON:0000955,6.30e-09,47;UBERON:0006238,6.30e-09,47;UBERON:0001049,1.90e-08,52;UBERON:0005068,1.90e-08,52;UBERON:0006241,1.90e-08,52;UBERON:0007135,1.90e-08,52;UBERON:0002616,1.91e-08,46;UBERON:0003528,2.65e-08,29;UBERON:0002791,2.65e-08,29;UBERON:0001893,2.65e-08,29;UBERON:0007023,3.47e-08,51;UBERON:0003080,6.36e-08,40;UBERON:0002021,8.95e-08,10;UBERON:0000411,8.95e-08,10;UBERON:0001950,8.95e-08,10;UBERON:0002020,9.59e-08,34;UBERON:0000956,9.84e-08,21;UBERON:0001869,9.84e-08,21;UBERON:0000203,9.84e-08,21;UBERON:0010314,1.34e-07,92;UBERON:0003056,1.56e-07,49;UBERON:0002780,1.83e-07,39;UBERON:0001890,1.83e-07,39;UBERON:0006240,1.83e-07,39;UBERON:0010371,2.49e-07,73;UBERON:0002346,4.26e-07,64;UBERON:0003075,4.26e-07,64;UBERON:0007284,4.26e-07,64;UBERON:0002619,6.22e-07,17 | |||
|phase1_expression=13.1322054625931,66.654302859118,67.3398874296513,47.7893453864791,56.6012174839372,17.9630820945722,10.2789561862031,0.129123323441576,0,0,0,0,0,0,14.3237197580735,8.30148596298286,16.7894850750755,0.315462165358238,0.274228867211478,1.27316895539409,16.8385714499118,2.18440092641948,0.522399578277871,8.63959083084396,12.15869189656,37.8993096315913,26.7072437618626,23.7018355954478,17.6721780094428,18.3981994724749,11.5299865540758,4.44521471421742,4.92051830067656,0,2.88851619751275,3.49092755252834,3.87921776898501,28.8786825208466,10.9386948233332,23.5585684788209,28.8233429135197,33.4692287629638,26.2175590636823,2.64383317748712,2.73717714292689,1.10128051297009,1.56478268869608,10.4652075062614,22.6276768216506,13.8045228342741,1.81982348112971,8.62515386189829,0,0.725362142011344,0,1.02903774414379,5.73066879877513,5.15672092277442,8.29497489524351,8.46385566835253,11.4089652631112,2.71075625655306,0.889294796111139,1.7997994345628,2.96659908770092,0.7104801149461,5.39280198933128,9.98967593836042,15.8645106831971,11.340498819862,12.1988477583802,10.8547374073445,6.84692476950002,7.59442955132715,6.61333750025831,11.0306254393203,23.1243350098716,28.8573384072524,23.6554061214615,11.2103344570665,8.32537556781928,6.77187381723788,15.6342479440773,11.2552522006336,24.142123148736,11.7851434189467,11.5321061447273,10.4383689662168,0.454357159999104,0.529000920747499,13.3337664802772,5.16254326188832,30.5987100168488,5.39703191637817,11.0461990966104,13.4408066129201,7.5839986871146,0,0,0,8.73229202615419,8.98285341900225,20.3844191765317,35.5533351576666,2.81438353314578,1.77351905832569,3.0331466700887,12.6744106488157,11.9111426477699,19.1490359393624,5.03107447621794,2.43572382649713,8.53277339847416,4.82312449768392,11.7588707135705,11.0586600370114,21.0115722574218,12.5801440520323,17.6922110389975,7.27950824763341,8.83366073841574,10.1823803158397,9.31958806090611,20.7874365878198,27.2280718857492,22.480220858356,7.18890747035522,4.19931911695385,4.06624726633807,31.7556155538224,42.0900554593136,20.356005042284,70.7464983182565,69.0431734791892,27.6358099264215,33.9084239811613,8.7581852911272,8.08645308965605,6.31806896084187,9.6803253707778,7.93734702072493,8.04657365517155,9.54329287968351,11.6042709733501,12.1104968489364,11.2740073850668,11.9938207436453,12.1590584247337,2.80238390812695,7.18603104637713,15.4836989264275,5.69908904311695,6.67313398141435,5.57203466435466,7.61393904709391,12.5391588095651,0.702213187313235,1.02939162845886,1.42081749697796,24.8550927042602,13.8370375388847,11.3439098720439,17.7558551688908,12.0026181365916,15.5809784016252,11.8592311822708,14.4867636755794,13.3112490298573,14.1521470925593,11.4917224855367,16.7001747664463,10.3801991071986,12.953456802172,16.5073895075257,70.6574227175468,10.496270462687,11.2342386214491,19.3048913664387,11.5175655289026,11.8440702648824,8.89185483122444,9.07575860805041,6.67134131534611,5.32631753115166,16.6085171540579,5.43506550589236,5.52937459360593,4.77495532898762,7.60359939764569,17.9763881730844,18.8040103390984,19.515844778928,3.98302592001472,7.65465034485183,12.3978509240388,14.0519416213267,17.6496763322539,17.5339549725796,24.6622494784603,19.9273699772463,22.9218142648407,19.8669433914099,5.92905254174298,7.84171996865642,9.82794975566015,6.52100125916076,12.9830477688642,14.7118067448974,12.731292589071,22.4402987211632,13.4572238223279,17.5719304440372,31.629005436018,21.2120340171047,13.7296576170407,11.1134706296729,8.96987067609561,11.5786445127208,13.4869828821621,9.66406200029472,4.88894929326078,6.28056817368196,6.57132695207806,12.5629693081362,16.663054862021,17.1717610114863,19.0738524368491,19.4888926890922,22.1642128433907,16.3863314715738,13.4694285855399,16.4899926782923,1.50791283939272,2.17562273527484,15.2446924635901,30.3530420935206,16.0550589987792,13.83097901788,0,3.28212205365685,3.47059041357882,2.34263246577983,7.97066571611356,3.10659437338318,2.89638276307112,8.49229592366497,3.23848561339915,6.72188473196017,5.92931666919785,35.6666661228206,16.1811697137426,6.23229612835393,8.47012188638596,13.1976098378028,3.98235415019888,8.01176099311439,2.72091201268276,2.26326095707078,2.65771703592696,5.53383266299069,3.87642439752332,8.36127577798263,8.19943970284859,7.9009189483954,3.16255825724996,13.4076206222643,12.9367050186439,8.10274923140896,4.39819524861365,9.21649250635847,8.33499098118686,7.66985915688903,8.06290200950393,12.7875278628132,6.33613611772018,21.8187032989735,13.4522322813527,15.6641940294406,3.06782410722221,6.51379589224083,8.71418111222896,13.6236946788401,21.569581910609,17.0591277849669,16.4036045565939,10.3193433981611,5.92622487583077,12.0555812483002,13.6694227721025,10.7525741407066,8.15896463970505,7.41742697315387,8.29199842826543,14.3200592702267,8.54107182669065,11.5892096262304,8.5324219249223,9.82714991268003,8.7345025498471,10.2496903252464,16.4480376893418,18.8464278228501,16.9795615012249,15.5334828271731,0,10.0176085849466,3.805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| |||
|short_description=p1@Nos1ap | |||
}} |
Revision as of 05:19, 5 August 2015
Short description: | p1@Nos1ap |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nos1ap_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 0bp_to_ENSMUST00000159665, ENSMUST00000161966, NM_001109985, uc007dmg.1, uc007dmh.1, uc011wvt.1_5end |
EntrezGene: | 70729 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 4.03e-12 | 122 |
tube | 3.25e-11 | 114 |
regional part of nervous system | 2.10e-09 | 54 |
brain | 6.30e-09 | 47 |
future brain | 6.30e-09 | 47 |
neural tube | 1.90e-08 | 52 |
neural rod | 1.90e-08 | 52 |
future spinal cord | 1.90e-08 | 52 |
neural keel | 1.90e-08 | 52 |
regional part of brain | 1.91e-08 | 46 |
brain grey matter | 2.65e-08 | 29 |
regional part of telencephalon | 2.65e-08 | 29 |
telencephalon | 2.65e-08 | 29 |
adult organism | 3.47e-08 | 51 |
anterior neural tube | 6.36e-08 | 40 |
occipital lobe | 8.95e-08 | 10 |
visual cortex | 8.95e-08 | 10 |
neocortex | 8.95e-08 | 10 |
gray matter | 9.59e-08 | 34 |
cerebral cortex | 9.84e-08 | 21 |
cerebral hemisphere | 9.84e-08 | 21 |
pallium | 9.84e-08 | 21 |
structure with developmental contribution from neural crest | 1.34e-07 | 92 |
pre-chordal neural plate | 1.56e-07 | 49 |
regional part of forebrain | 1.83e-07 | 39 |
forebrain | 1.83e-07 | 39 |
future forebrain | 1.83e-07 | 39 |
ecto-epithelium | 2.49e-07 | 73 |
neurectoderm | 4.26e-07 | 64 |
neural plate | 4.26e-07 | 64 |
presumptive neural plate | 4.26e-07 | 64 |
regional part of cerebral cortex | 6.22e-07 | 17 |