FFCP PHASE1:Mm9::chr15:36538447..36538475,-: Difference between revisions
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{{FFCP|EntrezGene=18458|HGNC=|MCL_coexpression_id=773|UniProt=P29341,Q3V2M1|association_with_transcript=252bp_to_ENSMUST00000001809,ENSMUST00000146327,NM_008774,uc007vmx.2,uc007vmy.2_5end|description=CAGE_peak_4_at_Pabpc1_5end|id=chr15:36538447..36538475,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!1.91e-11!193;UBERON:0004120!1.91e-11!193;UBERON:0006603!1.91e-11!193;UBERON:0005156!1.57e-07!26;UBERON:0000990!1.57e-07!26;UBERON:0003133!3.99e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.96e-09,120;UBERON:0004120,1.96e-09,120;UBERON:0006603,1.96e-09,120;UBERON:0005156,1.42e-07,26;UBERON:0000990,1.42e-07,26;UBERON:0001048,1.82e-07,134;UBERON:0003133,3.63e-07,24|phase1_expression=0,0,0.909998478779072,0.30246421130683,1.00179145989269,0.671517087647559,1.40167584357315,1.29123323441576,2.39340827657833,3.5109678948299,1.19852577757853,1.43589886191606,0.856003649656029,1.22388563386596,7.99463428357591,8.30148596298286,9.79386629379405,1.73504190947031,1.7824876368746,0.42438965179803,6.03807360072595,1.58865521921416,1.82839852397255,2.23989391910769,0.45881856213434,0,0.430761996159075,1.07735616342945,0.760093677825496,1.51218077855958,0.665191531965914,1.90509202037889,0,0,1.1554064790051,1.32987716286794,1.02084678131185,1.67412652294763,0,0.523523743973798,1.17646297606203,0.683045484958446,1.45653105909346,8.18329316841252,9.7321853970734,8.62669735159903,4.69434806608824,1.52617609466313,0.659058548203415,0.972149495371417,3.3596741190087,1.43752564364972,0.503347818173209,5.07753499407941,2.68875039313971,1.80081605225163,2.0057340795713,1.03134418455488,0.404632921719196,0,1.26766280701236,2.71075625655306,9.78224275722253,3.5995988691256,3.9554654502679,1.4209602298922,4.49400165777607,3.45796474789399,1.76272340924412,0.945041568321835,1.26194976810829,1.14260393761521,0.220868540951614,1.22490799214954,0.670918297127655,0.919218786610021,0,0.255374676170375,0.46081959976873,1.18697658957174,0.548925861614458,0.52091337055676,0,0,0.30559649555362,2.06240009831567,1.13897344639282,1.3047961207771,0.984440513331393,1.13357340160178,1.44932244350839,0,9.51959867190851,2.15881276655127,1.94932925234301,7.6164570806547,1.82577746171277,1.36344258062446,1.81850203222008,0.35333957451034,0,0,0,0,0.865964164044856,0.760079596425296,2.02209778005913,8.67797485864856,18.125651855302,3.26572705942614,5.37804512975021,5.1759131313064,6.22661842591358,2.11011696773672,7.64326596382081,1.38233250462643,6.67426412882809,9.83275627055399,16.8076004870476,4.85300549842228,11.9254419968613,5.81850303762267,1.86391761218122,0.585561594023094,3.97948742945565,6.89734049063197,2.39630249011841,0.599902730993408,1.39777249780371,0.299581278809645,1.37250180845588,3.26701315493447,0,0.255715457330331,0,0.324482526135515,4.48093200941392,12.3162900903992,2.27450482590307,4.62972082950243,8.06746746368763,0.919608417733892,3.96136685571768,1.80845781402858,4.35433594568498,2.43416068541215,2.06143794031403,1.03481348295606,4.74249584452253,5.10586416453112,4.39877810409872,10.302199424096,2.50242524303038,3.48252166522167,3.2925141825271,4.97585667046233,1.40442637462647,2.05878325691772,1.70498099637356,2.89976081549703,3.04883877975425,2.16074473753218,4.7348947117042,1.57411385397923,2.1597395804233,1.16266972375204,0.804820204198858,3.61972561338225,0.493679549740441,0.820837320395476,2.51313309592153,1.90059983652932,1.09775057645525,3.08674763148855,0,2.98423375899925,1.98251269790279,2.11560453330835,3.19932375802851,1.39342003116263,3.47942145569652,6.05050573870028,2.2237804384487,1.71203063501303,3.32170343081158,1.97638745668813,2.26201687920243,8.15721535368718,1.75467678407208,12.5834717211591,3.8904848977445,3.18626037206988,22.9498160153229,1.94222471436539,3.38123207019241,3.25842124552503,2.71533482034676,9.8190147846446,1.83385957660346,1.03327103585722,1.255989822731,1.60416313098341,0.592905254174298,10.0107063429656,14.7419246334902,12.367416181167,10.7515864335907,9.16473207059184,4.07401362850272,12.083237772934,48.3162975789605,2.74561413188081,10.0637744569148,6.32639611036456,0.312037673114561,2.02063102357689,1.25578189465339,7.23665282045051,2.03228509183265,3.03186258832776,2.93336957595647,1.35796068620151,1.64283173801951,2.68010011906905,4.04674189506223,11.5128852236101,5.35959489961049,6.2010113101657,2.07291199254733,1.14704320301017,1.55416483679306,3.47157740595628,4.52373851817817,3.26343410291226,0.983528546038072,8.55403913544671,0.160550589987792,0.586058432961016,6.06559297893699,2.52470927204373,3.15508219416257,3.51394869866975,4.73931475012158,4.30143836314594,5.56996685205985,3.67999490025482,1.61924280669958,4.09158201075837,2.76701444562566,0.321321316421807,10.0777460497871,8.369083372361,9.77321756121457,7.75359577970917,2.65490276679926,2.6705869977048,2.11626489875326,3.77210159511796,4.72483028609236,0.307435147943927,2.3258546385139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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18458 | |||
|HGNC= | |||
|MCL_coexpression_id=773 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P29341,uniprot:Q3V2M1 | |||
|association_with_transcript=252bp_to_ENSMUST00000001809,ENSMUST00000146327,NM_008774,uc007vmx.2,uc007vmy.2_5end | |||
|cluster_id=chr15:36538447..36538475,- | |||
|description=CAGE_peak_4_at_Pabpc1_5end | |||
|id=chr15:36538447..36538475,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!1.91e-11!193;UBERON:0004120!1.91e-11!193;UBERON:0006603!1.91e-11!193;UBERON:0005156!1.57e-07!26;UBERON:0000990!1.57e-07!26;UBERON:0003133!3.99e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.96e-09,120;UBERON:0004120,1.96e-09,120;UBERON:0006603,1.96e-09,120;UBERON:0005156,1.42e-07,26;UBERON:0000990,1.42e-07,26;UBERON:0001048,1.82e-07,134;UBERON:0003133,3.63e-07,24 | |||
|phase1_expression=0,0,0.909998478779072,0.30246421130683,1.00179145989269,0.671517087647559,1.40167584357315,1.29123323441576,2.39340827657833,3.5109678948299,1.19852577757853,1.43589886191606,0.856003649656029,1.22388563386596,7.99463428357591,8.30148596298286,9.79386629379405,1.73504190947031,1.7824876368746,0.42438965179803,6.03807360072595,1.58865521921416,1.82839852397255,2.23989391910769,0.45881856213434,0,0.430761996159075,1.07735616342945,0.760093677825496,1.51218077855958,0.665191531965914,1.90509202037889,0,0,1.1554064790051,1.32987716286794,1.02084678131185,1.67412652294763,0,0.523523743973798,1.17646297606203,0.683045484958446,1.45653105909346,8.18329316841252,9.7321853970734,8.62669735159903,4.69434806608824,1.52617609466313,0.659058548203415,0.972149495371417,3.3596741190087,1.43752564364972,0.503347818173209,5.07753499407941,2.68875039313971,1.80081605225163,2.0057340795713,1.03134418455488,0.404632921719196,0,1.26766280701236,2.71075625655306,9.78224275722253,3.5995988691256,3.9554654502679,1.4209602298922,4.49400165777607,3.45796474789399,1.76272340924412,0.945041568321835,1.26194976810829,1.14260393761521,0.220868540951614,1.22490799214954,0.670918297127655,0.919218786610021,0,0.255374676170375,0.46081959976873,1.18697658957174,0.548925861614458,0.52091337055676,0,0,0.30559649555362,2.06240009831567,1.13897344639282,1.3047961207771,0.984440513331393,1.13357340160178,1.44932244350839,0,9.51959867190851,2.15881276655127,1.94932925234301,7.6164570806547,1.82577746171277,1.36344258062446,1.81850203222008,0.35333957451034,0,0,0,0,0.865964164044856,0.760079596425296,2.02209778005913,8.67797485864856,18.125651855302,3.26572705942614,5.37804512975021,5.1759131313064,6.22661842591358,2.11011696773672,7.64326596382081,1.38233250462643,6.67426412882809,9.83275627055399,16.8076004870476,4.85300549842228,11.9254419968613,5.81850303762267,1.86391761218122,0.585561594023094,3.97948742945565,6.89734049063197,2.39630249011841,0.599902730993408,1.39777249780371,0.299581278809645,1.37250180845588,3.26701315493447,0,0.255715457330331,0,0.324482526135515,4.48093200941392,12.3162900903992,2.27450482590307,4.62972082950243,8.06746746368763,0.919608417733892,3.96136685571768,1.80845781402858,4.35433594568498,2.43416068541215,2.06143794031403,1.03481348295606,4.74249584452253,5.10586416453112,4.39877810409872,10.302199424096,2.50242524303038,3.48252166522167,3.2925141825271,4.97585667046233,1.40442637462647,2.05878325691772,1.70498099637356,2.89976081549703,3.04883877975425,2.16074473753218,4.7348947117042,1.57411385397923,2.1597395804233,1.16266972375204,0.804820204198858,3.61972561338225,0.493679549740441,0.820837320395476,2.51313309592153,1.90059983652932,1.09775057645525,3.08674763148855,0,2.98423375899925,1.98251269790279,2.11560453330835,3.19932375802851,1.39342003116263,3.47942145569652,6.05050573870028,2.2237804384487,1.71203063501303,3.32170343081158,1.97638745668813,2.26201687920243,8.15721535368718,1.75467678407208,12.5834717211591,3.8904848977445,3.18626037206988,22.9498160153229,1.94222471436539,3.38123207019241,3.25842124552503,2.71533482034676,9.8190147846446,1.83385957660346,1.03327103585722,1.255989822731,1.60416313098341,0.592905254174298,10.0107063429656,14.7419246334902,12.367416181167,10.7515864335907,9.16473207059184,4.07401362850272,12.083237772934,48.3162975789605,2.74561413188081,10.0637744569148,6.32639611036456,0.312037673114561,2.02063102357689,1.25578189465339,7.23665282045051,2.03228509183265,3.03186258832776,2.93336957595647,1.35796068620151,1.64283173801951,2.68010011906905,4.04674189506223,11.5128852236101,5.35959489961049,6.2010113101657,2.07291199254733,1.14704320301017,1.55416483679306,3.47157740595628,4.52373851817817,3.26343410291226,0.983528546038072,8.55403913544671,0.160550589987792,0.586058432961016,6.06559297893699,2.52470927204373,3.15508219416257,3.51394869866975,4.73931475012158,4.30143836314594,5.56996685205985,3.67999490025482,1.61924280669958,4.09158201075837,2.76701444562566,0.321321316421807,10.0777460497871,8.369083372361,9.77321756121457,7.75359577970917,2.65490276679926,2.6705869977048,2.11626489875326,3.77210159511796,4.72483028609236,0.307435147943927,2.32585463851399,1.45413491791002,1.78248689192361,0.948110273807448,0,1.03135543248187,0.340439605753788,2.34079422240703,3.36332577835162,1.71469628025274,1.24138163549592,2.31879462882692,2.46823530903181,5.48036908406279,14.3149741918863,3.38931313382112,3.74898276693435,6.43056386471772,23.2508774442104,4.52346936961169,5.252383136138,5.41664969158702,7.28702091574627,0.927126510052548,27.6810826892521,13.4151464176095,6.85219751267933,17.3298980444316,22.4178533462481,16.9295848172827,1.35982743995084,1.95932033253121,1.79659965945751,1.90934123603023,9.80641580101519,3.25311147402958,1.62008011232702,2.50905955217362,0.655087691238533,1.75323650300267,6.69492991375221,1.83229159388821,3.11075935900303,11.1841076355647,40.5858915852617,8.07389348637486,2.64733584731356,2.52786544847262,2.19571699912143,2.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| |||
|short_description=p4@Pabpc1 | |||
}} |
Revision as of 05:15, 5 August 2015
Short description: | p4@Pabpc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Pabpc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:773 |
Association with transcript: | 252bp_to_ENSMUST00000001809, ENSMUST00000146327, NM_008774, uc007vmx.2, uc007vmy.2_5end |
EntrezGene: | 18458 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesoderm | 1.96e-09 | 120 |
mesoderm-derived structure | 1.96e-09 | 120 |
presumptive mesoderm | 1.96e-09 | 120 |
reproductive structure | 1.42e-07 | 26 |
reproductive system | 1.42e-07 | 26 |
primordium | 1.82e-07 | 134 |
reproductive organ | 3.63e-07 | 24 |