Personal tools

FFCP PHASE1:Mm9::chr15:36538306..36538374,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=18458|HGNC=|MCL_coexpression_id=0|UniProt=P29341,Q3V2M1|association_with_transcript=353bp_to_ENSMUST00000001809,ENSMUST00000146327,NM_008774,uc007vmx.2,uc007vmy.2_5end|description=CAGE_peak_2_at_Pabpc1_5end|id=chr15:36538306..36538374,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!7.41e-14!193;UBERON:0004120!7.41e-14!193;UBERON:0006603!7.41e-14!193;UBERON:0001048!4.01e-08!147;UBERON:0003104!4.14e-07!131;UBERON:0009142!4.14e-07!131;UBERON:0002553!5.72e-07!39;UBERON:0002323!9.71e-07!37;UBERON:0004458!9.71e-07!37|ontology_enrichment_uberon_v019_2=UBERON:0000926,8.49e-10,120;UBERON:0004120,8.49e-10,120;UBERON:0006603,8.49e-10,120;UBERON:0001048,1.28e-07,134;UBERON:0002553,5.72e-07,39;UBERON:0002323,9.71e-07,37;UBERON:0004458,9.71e-07,37|phase1_expression=7.20669811971573,2.09385244583617,1.81999695755814,1.81478526784098,2.00358291978539,3.86122325397347,4.67225281191051,6.58528949552039,13.6565060487117,17.7889040004715,11.4716038711088,14.5185329371512,6.16322627752341,4.80812213304486,16.3223783289675,12.755941845559,19.5877325875881,16.8772258466657,11.5176124228821,7.21462408056651,117.189653828174,7.74469419366905,2.61199789138935,7.1996590257033,7.11168771308227,3.44539178469012,4.73838195774982,4.74036711908956,9.69119439227507,10.0812051903972,7.76056787293567,3.17515336729816,3.07532393792285,0,7.22129049378186,7.97926297720763,5.51257261908397,16.3227335987394,10.9386948233332,15.1821885752402,18.2351761289614,14.3439551841274,16.0218416500281,25.5570540490422,27.3717714292689,23.6775310288569,7.82391344348039,3.92445281484804,5.4921545683618,3.30530828426282,6.99932108126813,7.18762821824858,10.7380867876951,5.80289713609076,13.779845764841,5.14518872071894,9.45560351797897,5.15672092277442,7.68802551266472,6.87688273053643,8.23980824558033,10.8430250262122,11.5608323494448,10.7987966073768,7.9109309005358,10.6572017241915,9.28760342607055,9.98967593836042,5.49554945234932,5.8052553482627,6.30974884054146,6.28432165688368,7.28866185140325,8.45186514583183,4.98396449294829,4.5960939330501,3.30347642998166,8.2996769755372,5.9906547969935,7.64940468835124,8.59983849862651,8.85552729946492,3.90856198601933,8.4414391504752,5.65353516774197,7.66034322231536,11.10499110233,6.71038004971082,5.75519069332199,4.91215140694106,4.92769630792852,6.88339101585109,40.1183086887573,7.55584468292944,5.19821133958135,20.1612099193801,20.6453297593675,7.83979483859066,4.41636207824877,7.42013106471715,7.32385782838739,6.41632387071589,5.09610479413291,7.11066703153331,4.76280290224671,2.02687892380079,7.07734223020697,34.8260833143133,48.4213842420211,9.50029690014878,14.5727674483554,10.0473607843007,13.3756988408514,6.63179618431539,28.4564671268406,11.1843266283411,23.4835219347655,36.5836373007376,35.384422077995,19.8973225435313,29.5927634736927,16.4857586065976,14.9113408974498,9.66176630138106,18.431310199584,42.6613282198348,13.8985544426868,15.5974710058286,14.2318654321832,7.63932260964596,5.03250663100489,12.1884721549478,5.9100268865374,3.3243009452943,7.89594569326328,8.27430441645564,18.2292461292066,38.4417539185187,9.60346482047964,12.8369532090749,23.5518001762494,7.81667155073808,10.2635413989049,6.48030716693575,19.7305847538851,12.6832583082001,12.1812241927647,16.298312356558,22.6346392579484,16.8304411349359,16.5394056714112,23.6731391021781,9.45360647367033,11.1440693287093,9.05441400194951,10.5488161413801,19.6619692447706,16.4702660553418,13.924011470384,14.0845525324141,10.5536726991493,8.4629168886677,16.0986420197943,9.64144735562279,5.707883176833,7.67362017676346,9.12129564758705,18.6824547787471,9.37991144506839,8.53670813211295,15.0787985755292,7.74859933354261,8.78200461164202,11.1391327571109,5.04695876553905,15.2298826321341,5.61711931072457,10.0491215332147,13.0105832826493,7.19933682767359,12.1135413642768,14.9245808221273,12.6755484991576,6.65789691393957,28.4717436926707,8.39964669092456,9.80207314321051,31.0372096384195,20.4712291475076,37.7504151634773,22.2622191370935,21.3081162382173,59.9350567011738,9.59687505921722,24.7957018480777,8.96065842519383,11.2492442557223,30.6493532920692,11.6987593679876,12.3992524302866,10.5189147653721,15.1778511623815,4.44678940630723,31.5337249803418,45.0120098809235,23.1607975756399,27.5889765088364,22.4294758569748,14.2590476997595,27.9065253327286,154.028465436284,16.1991233780968,18.6898668485561,36.8419538191818,9.98520553966594,10.8608917517258,10.9432422248366,34.7359335381624,14.041242452662,6.253216588426,10.5927234687317,6.28056817368196,5.86725620721255,9.38035041674168,12.3782693260727,31.4165173051056,14.029527825451,22.1464689648775,16.9022054776936,9.5040722535128,10.3610989119537,12.150520920847,12.0633027151418,8.15858525728064,8.35999264132362,37.8033342437484,9.31193421929193,9.49414661396846,24.9181116972547,10.6037789425837,7.57219726599016,8.98009111882268,7.75524231838076,11.2315335037699,12.9223230967789,10.190755108398,11.334699646897,12.5670018901864,9.48690667071656,9.63963949265421,21.8587731220734,22.9704628730759,32.9031657894224,22.2709666012923,34.5137359683903,8.49732226542435,7.86041248108353,10.7504895460862,6.20133975049623,6.7635732547664,11.3708448994017,20.7214225802178,13.1904030002347,11.0612865277536,13.7044191147498,16.5016869197099,4.08527526904546,9.00305470156551,14.8762486350168,11.1455258216428,8.15765074754458,10.3453914209201,12.6702745863633,13.3964577610424,36.1394430418114,12.921756322693,16.7601582521771,13.8504452470843,58.7730513173096,15.3797958566797,18.0252239444736,21.1741760671129,45.7624913508866,9.08583979851498,77.0627672398316,29.719708986704,20.7417870654077,30.3273215777553,106.758191850121,53.9916488767393,12.4084253895514,13.9951452323658,17.8277966207707,16.2294005062569,19.1383276116587,10.1659733563424,5.72428306355547,5.85447228840512,5.45906409365444,7.95699643670442,20.91132429851,8.89970202745701,12.0541925161367,33.552322906694,912.05517479102,19.4371509857172,10.7548018797113,14.1949367491155,8.52454834953025,9.63049915297436,21.00694571759,11.4579858662676,23.1739151180821,261.152434612913,475.537540331736,21.8047673233443,17.6370937302443,15.6120654890537,25.0747188347144,18.976829740753,27.6167083145958,18.6302946755952,16.5412270435526,14.9430345923258,22.023767123295,12.7040993272419,17.9322500561144,13.5658696712865,14.7264896748777,8.84248496099324,14.2071010159401,14.9822140537824,19.4746154982331,17.9666322449937,11.2609485270709,31.8683826225041,29.368467933832,30.0943262421218,2.82375921308533,3.68260189205742,4.01026859407578,4.1244763762485,2.74033007908257,4.5323633843382,5.40018000185445,3.15224842256954,5.89085131679466,3.10656187051092,9.02949923982337,27.5327162646711,15.1952909121179,21.6364978190782,10.4806581313991,7.72142735490059,6.66740183404846,5.15087643097235,7.38114182061175,5.55933865880354,7.35089969681695,6.97917463128482,7.58496210506047,7.2988673741551,7.46661096422972,6.19181798667996,7.88013416425017,8.68091492086673,3.70877310722976,6.62395140604788,4.11443102862498,7.0990322463735,7.39152188836695,6.68593516508711,6.11710972699649,7.02301245500915,8.59761472502031,5.26139422875686,6.65440157844723,7.85599180320834,8.06718123244384,5.81176446015824,4.91077251803627,6.19747364743864,11.3814900478873,21.2338991247254,10.9947855969342,49.8500845392052,41.8921447230767,23.3826904266686,14.3758058084661|short_description=p2@Pabpc1}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:18458
|HGNC=
|MCL_coexpression_id=0
|TSSclassifier=NA
|UniProt=uniprot:P29341,uniprot:Q3V2M1
|association_with_transcript=353bp_to_ENSMUST00000001809,ENSMUST00000146327,NM_008774,uc007vmx.2,uc007vmy.2_5end
|cluster_id=chr15:36538306..36538374,-
|description=CAGE_peak_2_at_Pabpc1_5end
|id=chr15:36538306..36538374,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000926!7.41e-14!193;UBERON:0004120!7.41e-14!193;UBERON:0006603!7.41e-14!193;UBERON:0001048!4.01e-08!147;UBERON:0003104!4.14e-07!131;UBERON:0009142!4.14e-07!131;UBERON:0002553!5.72e-07!39;UBERON:0002323!9.71e-07!37;UBERON:0004458!9.71e-07!37
|ontology_enrichment_uberon_v019_2=UBERON:0000926,8.49e-10,120;UBERON:0004120,8.49e-10,120;UBERON:0006603,8.49e-10,120;UBERON:0001048,1.28e-07,134;UBERON:0002553,5.72e-07,39;UBERON:0002323,9.71e-07,37;UBERON:0004458,9.71e-07,37
|phase1_expression=7.20669811971573,2.09385244583617,1.81999695755814,1.81478526784098,2.00358291978539,3.86122325397347,4.67225281191051,6.58528949552039,13.6565060487117,17.7889040004715,11.4716038711088,14.5185329371512,6.16322627752341,4.80812213304486,16.3223783289675,12.755941845559,19.5877325875881,16.8772258466657,11.5176124228821,7.21462408056651,117.189653828174,7.74469419366905,2.61199789138935,7.1996590257033,7.11168771308227,3.44539178469012,4.73838195774982,4.74036711908956,9.69119439227507,10.0812051903972,7.76056787293567,3.17515336729816,3.07532393792285,0,7.22129049378186,7.97926297720763,5.51257261908397,16.3227335987394,10.9386948233332,15.1821885752402,18.2351761289614,14.3439551841274,16.0218416500281,25.5570540490422,27.3717714292689,23.6775310288569,7.82391344348039,3.92445281484804,5.4921545683618,3.30530828426282,6.99932108126813,7.18762821824858,10.7380867876951,5.80289713609076,13.779845764841,5.14518872071894,9.45560351797897,5.15672092277442,7.68802551266472,6.87688273053643,8.23980824558033,10.8430250262122,11.5608323494448,10.7987966073768,7.9109309005358,10.6572017241915,9.28760342607055,9.98967593836042,5.49554945234932,5.8052553482627,6.30974884054146,6.28432165688368,7.28866185140325,8.45186514583183,4.98396449294829,4.5960939330501,3.30347642998166,8.2996769755372,5.9906547969935,7.64940468835124,8.59983849862651,8.85552729946492,3.90856198601933,8.4414391504752,5.65353516774197,7.66034322231536,11.10499110233,6.71038004971082,5.75519069332199,4.91215140694106,4.92769630792852,6.88339101585109,40.1183086887573,7.55584468292944,5.19821133958135,20.1612099193801,20.6453297593675,7.83979483859066,4.41636207824877,7.42013106471715,7.32385782838739,6.41632387071589,5.09610479413291,7.11066703153331,4.76280290224671,2.02687892380079,7.07734223020697,34.8260833143133,48.4213842420211,9.50029690014878,14.5727674483554,10.0473607843007,13.3756988408514,6.63179618431539,28.4564671268406,11.1843266283411,23.4835219347655,36.5836373007376,35.384422077995,19.8973225435313,29.5927634736927,16.4857586065976,14.9113408974498,9.66176630138106,18.431310199584,42.6613282198348,13.8985544426868,15.5974710058286,14.2318654321832,7.63932260964596,5.03250663100489,12.1884721549478,5.9100268865374,3.3243009452943,7.89594569326328,8.27430441645564,18.2292461292066,38.4417539185187,9.60346482047964,12.8369532090749,23.5518001762494,7.81667155073808,10.2635413989049,6.48030716693575,19.7305847538851,12.6832583082001,12.1812241927647,16.298312356558,22.6346392579484,16.8304411349359,16.5394056714112,23.6731391021781,9.45360647367033,11.1440693287093,9.05441400194951,10.5488161413801,19.6619692447706,16.4702660553418,13.924011470384,14.0845525324141,10.5536726991493,8.4629168886677,16.0986420197943,9.64144735562279,5.707883176833,7.67362017676346,9.12129564758705,18.6824547787471,9.37991144506839,8.53670813211295,15.0787985755292,7.74859933354261,8.78200461164202,11.1391327571109,5.04695876553905,15.2298826321341,5.61711931072457,10.0491215332147,13.0105832826493,7.19933682767359,12.1135413642768,14.9245808221273,12.6755484991576,6.65789691393957,28.4717436926707,8.39964669092456,9.80207314321051,31.0372096384195,20.4712291475076,37.7504151634773,22.2622191370935,21.3081162382173,59.9350567011738,9.59687505921722,24.7957018480777,8.96065842519383,11.2492442557223,30.6493532920692,11.6987593679876,12.3992524302866,10.5189147653721,15.1778511623815,4.44678940630723,31.5337249803418,45.0120098809235,23.1607975756399,27.5889765088364,22.4294758569748,14.2590476997595,27.9065253327286,154.028465436284,16.1991233780968,18.6898668485561,36.8419538191818,9.98520553966594,10.8608917517258,10.9432422248366,34.7359335381624,14.041242452662,6.253216588426,10.5927234687317,6.28056817368196,5.86725620721255,9.38035041674168,12.3782693260727,31.4165173051056,14.029527825451,22.1464689648775,16.9022054776936,9.5040722535128,10.3610989119537,12.150520920847,12.0633027151418,8.15858525728064,8.35999264132362,37.8033342437484,9.31193421929193,9.49414661396846,24.9181116972547,10.6037789425837,7.57219726599016,8.98009111882268,7.75524231838076,11.2315335037699,12.9223230967789,10.190755108398,11.334699646897,12.5670018901864,9.48690667071656,9.63963949265421,21.8587731220734,22.9704628730759,32.9031657894224,22.2709666012923,34.5137359683903,8.49732226542435,7.86041248108353,10.7504895460862,6.20133975049623,6.7635732547664,11.3708448994017,20.7214225802178,13.1904030002347,11.0612865277536,13.7044191147498,16.5016869197099,4.08527526904546,9.00305470156551,14.8762486350168,11.1455258216428,8.15765074754458,10.3453914209201,12.6702745863633,13.3964577610424,36.1394430418114,12.921756322693,16.7601582521771,13.8504452470843,58.7730513173096,15.3797958566797,18.0252239444736,21.1741760671129,45.7624913508866,9.08583979851498,77.0627672398316,29.719708986704,20.7417870654077,30.3273215777553,106.758191850121,53.9916488767393,12.4084253895514,13.9951452323658,17.8277966207707,16.2294005062569,19.1383276116587,10.1659733563424,5.72428306355547,5.85447228840512,5.45906409365444,7.95699643670442,20.91132429851,8.89970202745701,12.0541925161367,33.552322906694,912.05517479102,19.4371509857172,10.7548018797113,14.1949367491155,8.52454834953025,9.63049915297436,21.00694571759,11.4579858662676,23.1739151180821,261.152434612913,475.537540331736,21.8047673233443,17.6370937302443,15.6120654890537,25.0747188347144,18.976829740753,27.6167083145958,18.6302946755952,16.5412270435526,14.9430345923258,22.023767123295,12.7040993272419,17.9322500561144,13.5658696712865,14.7264896748777,8.84248496099324,14.2071010159401,14.9822140537824,19.4746154982331,17.9666322449937,11.2609485270709,31.8683826225041,29.368467933832,30.0943262421218,2.82375921308533,3.68260189205742,4.01026859407578,4.1244763762485,2.74033007908257,4.5323633843382,5.40018000185445,3.15224842256954,5.89085131679466,3.10656187051092,9.02949923982337,27.5327162646711,15.1952909121179,21.6364978190782,10.4806581313991,7.72142735490059,6.66740183404846,5.15087643097235,7.38114182061175,5.55933865880354,7.35089969681695,6.97917463128482,7.58496210506047,7.2988673741551,7.46661096422972,6.19181798667996,7.88013416425017,8.68091492086673,3.70877310722976,6.62395140604788,4.11443102862498,7.0990322463735,7.39152188836695,6.68593516508711,6.11710972699649,7.02301245500915,8.59761472502031,5.26139422875686,6.65440157844723,7.85599180320834,8.06718123244384,5.81176446015824,4.91077251803627,6.19747364743864,11.3814900478873,21.2338991247254,10.9947855969342,49.8500845392052,41.8921447230767,23.3826904266686,14.3758058084661
|short_description=p2@Pabpc1
}}

Revision as of 05:14, 5 August 2015

Short description:p2@Pabpc1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Pabpc1_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: 353bp_to_ENSMUST00000001809, ENSMUST00000146327, NM_008774, uc007vmx.2, uc007vmy.2_5end
EntrezGene:18458
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Pabpc1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.21
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.86
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.67
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.59
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E713.66
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F217.79
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E611.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F114.52
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E46.16
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.81
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A116.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A312.76
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A519.59
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A216.88
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A411.52
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A67.21
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3117.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H27.74
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.61
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D27.11
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I14.74
GP2+ M cell, pool3.CNhs13240.11847-124I24.74
Ileum epithelium, pool1.CNhs13199.10252-104B99.69
Ileum epithelium, pool2.CNhs13232.10253-104C110.08
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C87.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F57.22
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F67.98
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G816.32
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H110.94
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H315.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G918.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H214.34
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H416.02
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D825.56
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D927.37
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B323.68
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.82
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.92
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.49
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.31
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A210.74
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.80
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A113.78
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.15
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E19.46
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.16
Mouse Granule cells, donor1.CNhs12131.11713-123C37.69
Mouse Granule cells, donor2.CNhs12357.11731-123E36.88
Mouse Granule cells, donor3.CNhs12108.11636-122C78.24
Mouse Meningeal cells, donor1.CNhs12132.11716-123C610.84
Mouse Meningeal cells, donor3.CNhs12109.11639-122D111.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C710.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E77.91
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D210.66
Mouse Microglia, donor1.CNhs12629.11718-123C89.29
Mouse Microglia, donor2.CNhs12634.11736-123E89.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.50
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.29
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.45
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.98
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.65
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.60
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.86
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E58.44
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.65
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.66
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.10
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.71
Mouse Schwann, donor1.CNhs12507.11728-123D95.76
Mouse Schwann, donor2.CNhs12573.11746-123F94.91
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.93
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C440.12
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.56
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.20
Mouse hepatocyte, donor8.CNhs13091.11824-124F620.16
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A720.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I77.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I87.42
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.32
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G37.08
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B634.83
accessory axillary lymph node, adult.CNhs10475.1063-29H948.42
adrenal gland, adult.CNhs10508.49-24D79.50
adrenal gland, embryo E14.CNhs11038.406-44C514.57
adrenal gland, embryo E16.CNhs11004.1254-43D610.05
adrenal gland, embryo E17.CNhs11043.1263-45I113.38
adrenal gland, embryo E18.CNhs11026.1262-18F56.63
adrenal gland, neonate N00.CNhs11191.1311-23C128.46
adrenal gland, neonate N25.CNhs11223.1377-27I311.18
amnion, adult pregnant day17.5.CNhs10488.583-22A823.48
aorta, adult.CNhs10498.46-23H136.58
bone (os femoris), adult.CNhs10483.56-12G235.38
bone (os femoris), neonate N02.CNhs11227.1985-43F519.90
bone (os femoris), neonate N16.CNhs11225.1525-43A629.59
bone (os femoris), neonate N20.CNhs11195.1350-25C316.49
cecum, adult.CNhs10467.37-13H414.91
cerebellum, adult.CNhs10494.15-8B29.66
cerebellum, neonate N30.CNhs11135.1395-42I218.43
colon, adult.CNhs10468.36-18H742.66
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C713.90
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D115.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D414.23
corpora quadrigemina, adult.CNhs10501.16-22A47.64
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F112.19
cortex, adult.CNhs10473.12-14D55.91
cortex, neonate N30.CNhs11107.1392-42F23.32
diencephalon, adult.CNhs10482.20-12F27.90
diencephalon, neonate N30.CNhs11201.1388-42B28.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B118.23
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A238.44
epididymis, adult.CNhs10490.58-23B29.60
eyeball, adult.CNhs10484.31-12G412.84
eyeball, embryo E12.CNhs11016.345-16C623.55
eyeball, embryo E14.CNhs10521.399-16E27.82
eyeball, embryo E15.CNhs10593.426-16C910.26
eyeball, embryo E17.CNhs11023.1261-18D46.48
eyeball, neonate N00.CNhs11207.633-15C619.73
eyeball, neonate N01.CNhs11140.1532-43E712.68
eyeball, neonate N02.CNhs11205.1551-44G812.18
eyeball, neonate N16.CNhs11188.777-19A216.30
forelimb, embryo E11.CNhs10596.335-25E222.63
forelimb, embryo E12.CNhs10600.359-14H216.83
forelimb, embryo E13.CNhs10589.384-1E216.54
forelimb, embryo E14.CNhs10577.413-26A823.67
forelimb, embryo E15.CNhs11007.437-20E79.45
forelimb, embryo E17.CNhs10598.1517-43C411.14
forelimb, embryo E18.CNhs11008.1520-43B59.05
gonad, embryo E13.CNhs11044.1564-45I610.55
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C819.66
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D216.47
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D513.92
heart, embryo E11.CNhs10586.331-24E914.08
heart, embryo E12.CNhs11015.353-12F510.55
heart, embryo E13.CNhs11013.376-3I98.46
heart, embryo E14.CNhs10597.403-26D416.10
heart, embryo E15.CNhs11017.431-16C89.64
heart, embryo E16.CNhs11021.457-17C65.71
heart, embryo E17.CNhs11025.479-18E57.67
heart, embryo E18.CNhs11030.1283-20G39.12
heart, neonate N00.CNhs11213.639-21E318.68
heart, neonate N03.CNhs11221.1349-25I29.38
heart, neonate N10.CNhs11118.749-24G18.54
heart, neonate N16.CNhs11209.782-15G115.08
heart, neonate N20.CNhs11127.821-26I67.75
heart, neonate N25.CNhs11196.1351-25D38.78
heart, neonate N30.CNhs11202.1390-42D211.14
hippocampus, adult.CNhs10478.13-16E85.05
hippocampus, neonate N00.CNhs11228.627-43G115.23
intestinal mucosa, adult.CNhs10506.860-29I35.62
intestine, adult.CNhs10496.178-9A310.05
intestine, embryo E12.CNhs11019.1251-16I513.01
intestine, embryo E13.CNhs11010.381-16D57.20
intestine, embryo E15.CNhs10602.976-16D812.11
intestine, embryo E16.CNhs10585.463-22H414.92
intestine, embryo E17.CNhs10582.482-18D312.68
intestine, embryo E18.CNhs10526.1289-20F76.66
intestine, neonate N00.CNhs11126.644-26D128.47
intestine, neonate N01.CNhs11192.1322-23E98.40
intestine, neonate N06.CNhs11102.688-20B89.80
intestine, neonate N07.CNhs11095.720-20F231.04
intestine, neonate N10.CNhs11098.755-23A520.47
intestine, neonate N20.CNhs11187.827-18D137.75
intestine, neonate N25.CNhs11121.1352-25E322.26
intestine, neonate N30.CNhs11131.1384-42G121.31
kidney, embryo E14.CNhs10606.411-4I959.94
kidney, embryo E15.CNhs10997.434-16F89.60
kidney, embryo E16.CNhs10584.464-22A524.80
kidney, embryo E17.CNhs11028.483-18I28.96
kidney, embryo E18.CNhs11001.1288-20C711.25
kidney, neonate N00.CNhs11214.646-21G730.65
kidney, neonate N10.CNhs11206.758-6D511.70
kidney, neonate N20.CNhs11113.832-19I112.40
kidney, neonate N25.CNhs11122.1353-25F310.52
kidney, neonate N30.CNhs11203.1385-42H115.18
liver, adult pregnant day01.CNhs10466.508-5B24.45
liver, embryo E12.CNhs10601.355-15F831.53
liver, embryo E13.CNhs10524.378-3H645.01
liver, embryo E14.CNhs10594.409-16E123.16
liver, embryo E15.CNhs10520.433-16D727.59
liver, embryo E16.CNhs10523.462-17F522.43
liver, embryo E17.CNhs10510.481-18A314.26
liver, embryo E18.CNhs10579.499-43G427.91
liver, neonate N00.CNhs11117.641-24F4154.03
liver, neonate N03.CNhs11123.1345-25G216.20
liver, neonate N06.CNhs11101.684-20A818.69
liver, neonate N07.CNhs11103.716-20H236.84
liver, neonate N10.CNhs11115.751-24B99.99
liver, neonate N20.CNhs11220.823-25A310.86
liver, neonate N25.CNhs11198.1368-26H110.94
liver, neonate N30.CNhs11106.1382-42D134.74
lung, adult.CNhs10474.28-22B114.04
lung, embryo E12.CNhs10522.354-16G26.25
lung, embryo E14.CNhs10604.404-26F810.59
lung, embryo E15.CNhs11020.432-17C56.28
lung, embryo E16.CNhs10998.458-17B65.87
lung, embryo E17.CNhs10605.480-44A69.38
lung, embryo E18.CNhs10583.1287-20I612.38
lung, neonate N00.CNhs11224.640-42C631.42
lung, neonate N06.CNhs11212.683-20E514.03
lung, neonate N07.CNhs11111.715-19A322.15
lung, neonate N10.CNhs11219.750-23E616.90
lung, neonate N20.CNhs11109.822-18A49.50
lung, neonate N25.CNhs11119.1359-25C710.36
lung, neonate N30.CNhs11133.1394-42H212.15
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A112.06
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A18.16
mammary gland, adult lactating day02.CNhs10480.595-22B68.36
mammary gland, adult pregnant day19.CNhs10476.588-5H237.80
medulla oblongata, adult.CNhs10477.17-12C29.31
medulla oblongata, neonate N30.CNhs11200.1396-42A39.49
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C724.92
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C210.60
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.57
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.98
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.76
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D711.23
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D812.92
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D910.19
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D411.33
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D512.57
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D69.49
olfactory brain, adult.CNhs10489.18-22I99.64
ovary, adult.CNhs10507.91-2I721.86
ovary, embryo E18.CNhs11040.505-44H722.97
ovary, neonate N00.CNhs11217.1299-22I432.90
oviduct, adult pregnant day01.CNhs10500.988-6G622.27
pancreas, adult.CNhs10486.34-16E434.51
pancreas, embryo E14.CNhs11012.405-44F48.50
pancreas, embryo E15.CNhs11042.1556-45F27.86
pancreas, embryo E16.CNhs11003.460-26E510.75
pancreas, embryo E17.CNhs10599.1558-45G36.20
pancreas, embryo E18.CNhs10580.1535-43I76.76
pancreas, neonate N00.CNhs11105.645-26G911.37
pancreas, neonate N01.CNhs11138.1531-43D720.72
pancreas, neonate N02.CNhs11139.1539-43D813.19
pancreas, neonate N16.CNhs11136.787-43B611.06
pancreas, neonate N25.CNhs11094.1555-45E213.70
pancreas, neonate N30.CNhs11182.1548-44H516.50
pituitary gland, adult.CNhs10493.21-1G84.09
pituitary gland, embryo E12.CNhs11018.346-16E69.00
pituitary gland, embryo E13.CNhs11009.370-44C714.88
pituitary gland, embryo E14.CNhs11037.398-44A511.15
pituitary gland, embryo E15.CNhs10592.427-16B98.16
pituitary gland, embryo E16.CNhs11036.449-43F610.35
pituitary gland, embryo E17.CNhs11039.1265-44F512.67
pituitary gland, neonate N00.CNhs11190.1308-22E913.40
placenta, adult pregnant day10.CNhs10472.539-13I736.14
placenta, adult pregnant day17.CNhs10464.577-18G312.92
prostate, adult.CNhs10470.859-1F816.76
skin, adult.CNhs10492.30-1C313.85
skin, neonate N00.CNhs11124.650-25G458.77
skin, neonate N03.CNhs11215.662-22H315.38
skin, neonate N06.CNhs11097.693-20I518.03
skin, neonate N10.CNhs11108.762-6C421.17
small intestine, neonate N16.CNhs11114.790-21I145.76
spinal cord, adult.CNhs10505.24-13C99.09
spleen, adult.CNhs10465.25-2G277.06
spleen, embryo E16.CNhs11035.461-43C129.72
spleen, embryo E18.CNhs11011.1271-21F220.74
spleen, neonate N10.CNhs11116.752-24D130.33
spleen, neonate N20.CNhs11112.824-19H1106.76
spleen, neonate N25.CNhs11099.1354-25G353.99
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C612.41
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C914.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D317.83
stomach, adult.CNhs10503.33-1H616.23
stomach, embryo E12.CNhs10588.356-43E319.14
stomach, embryo E15.CNhs10603.1252-16G810.17
stomach, embryo E16.CNhs11022.459-17D45.72
stomach, embryo E17.CNhs11006.1035-18D55.85
stomach, embryo E18.CNhs10999.1286-20C65.46
stomach, neonate N03.CNhs11193.1340-24B87.96
stomach, neonate N07.CNhs11210.718-18A920.91
stomach, neonate N25.CNhs11104.1355-25E48.90
stomach, neonate N30.CNhs11134.1386-42I112.05
submandibular gland, adult.CNhs10469.59-29C133.55
testis, adult.CNhs10504.57-7G5912.06
testis, embryo E13.CNhs11031.389-23F519.44
testis, embryo E15.CNhs11034.443-27C510.75
testis, embryo E16.CNhs11033.470-26G514.19
testis, embryo E17.CNhs11029.486-18I58.52
testis, embryo E18.CNhs11027.503-18G59.63
testis, neonate N00.CNhs11189.1300-22B721.01
testis, neonate N07.CNhs11222.726-26I411.46
testis, neonate N10.CNhs11204.763-44D923.17
testis, neonate N20.CNhs11110.839-18H3261.15
testis, neonate N30.CNhs11130.1391-42E2475.54
thymus, adult.CNhs10471.38-12B521.80
thymus, embryo E14.CNhs11041.402-44I417.64
thymus, embryo E15.CNhs11005.430-45I215.61
thymus, embryo E16.CNhs11002.456-26C525.07
thymus, embryo E17.CNhs10581.478-18C118.98
thymus, embryo E18.CNhs10595.1273-19G427.62
thymus, neonate N02.CNhs11181.1541-43F818.63
thymus, neonate N03.CNhs11137.2104-43C716.54
thymus, neonate N06.CNhs11197.681-26C414.94
thymus, neonate N07.CNhs11211.713-19D322.02
thymus, neonate N10.CNhs11194.748-24E412.70
thymus, neonate N20.CNhs11186.820-7A217.93
thymus, neonate N25.CNhs11125.1362-25G713.57
thymus, neonate N30.CNhs11132.1393-42G214.73
tongue, adult.CNhs10499.32-1B48.84
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H314.21
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F714.98
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G519.47
urinary bladder, adult.CNhs10481.879-12E417.97
uterus, adult pregnant day19.CNhs10497.590-15F511.26
uterus, adult.CNhs10509.92-27E531.87
vagina, adult.CNhs10502.89-27D529.37
vesicular gland, adult.CNhs10491.51-27F830.09
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.12
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I89.03
whole body, embryo E12.CNhs10587.857-27C927.53
whole body, embryo E13.CNhs10512.372-23H215.20
whole body, embryo E14.5.CNhs10578.420-27D221.64
whole body, embryo E14.CNhs10519.395-14B110.48
whole body, embryo E16.CNhs10514.453-14F27.72
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.38
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.35
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.98
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.58
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.30
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.47
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.88
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.68
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.39
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.69
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.12
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.60
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.65
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.20
whole body, embryo E17.5.CNhs10513.490-9F911.38
whole body, embryo E17.CNhs10517.475-3I521.23
whole body, embryo E18.CNhs10516.493-3B310.99
whole body, neonate N00.CNhs10525.657-19C249.85
whole body, neonate N01.CNhs10576.659-23C641.89
whole body, neonate N06.CNhs10515.692-21D123.38
whole body, neonate N10.CNhs10518.761-6B414.38





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
mesoderm8.49e-10120
mesoderm-derived structure8.49e-10120
presumptive mesoderm8.49e-10120
primordium1.28e-07134
anatomical cavity5.72e-0739
body cavity9.71e-0737
body cavity or lining9.71e-0737
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr15:36538306..36538374,-&oldid=3862661"