FFCP PHASE1:Mm9::chr12:71364422..71364433,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=135|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:71364422..71364433,-|id=chr12:71364422..71364433,-|ontology_enrichment_celltype=CL:0000117!6.15e-11!23;CL:0000337!6.15e-11!23;CL:0000540!6.34e-08!33;CL:0000047!6.34e-08!33;CL:0000031!6.34e-08!33;CL:0000404!6.34e-08!33;CL:0002612!8.67e-07!3|ontology_enrichment_celltype_v019_2=CL:0002612,3.64e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!5.00e-27!52;UBERON:0005068!5.00e-27!52;UBERON:0006241!5.00e-27!52;UBERON:0007135!5.00e-27!52;UBERON:0002346!1.35e-25!71;UBERON:0003075!1.35e-25!71;UBERON:0007284!1.35e-25!71;UBERON:0002020!1.67e-25!34;UBERON:0000033!6.64e-24!63;UBERON:0000955!7.20e-24!50;UBERON:0006238!7.20e-24!50;UBERON:0000073!1.55e-23!75;UBERON:0001016!1.55e-23!75;UBERON:0001017!5.96e-23!73;UBERON:0005743!5.96e-23!73;UBERON:0002616!2.18e-22!49;UBERON:0002791!3.63e-20!29;UBERON:0003528!3.63e-20!29;UBERON:0001893!3.63e-20!29;UBERON:0004121!6.36e-20!102;UBERON:0000924!6.36e-20!102;UBERON:0006601!6.36e-20!102;UBERON:0003056!1.30e-18!49;UBERON:0003080!1.70e-16!40;UBERON:0007811!2.74e-15!86;UBERON:0002780!3.01e-15!39;UBERON:0001890!3.01e-15!39;UBERON:0006240!3.01e-15!39;UBERON:0000153!2.72e-13!94;UBERON:0000956!2.85e-13!21;UBERON:0001869!2.85e-13!21;UBERON:0000203!2.85e-13!21;UBERON:0002021!4.46e-13!10;UBERON:0000411!4.46e-13!10;UBERON:0001950!4.46e-13!10;UBERON:0002619!2.44e-12!17;UBERON:0003076!8.53e-12!12;UBERON:0003057!8.53e-12!12;UBERON:0002298!1.69e-11!6;UBERON:0000025!6.44e-09!114;UBERON:0002420!3.22e-08!8;UBERON:0007245!3.22e-08!8;UBERON:0010009!3.22e-08!8;UBERON:0010011!3.22e-08!8;UBERON:0000454!3.22e-08!8;UBERON:0002950!3.63e-08!4;UBERON:0001891!3.63e-08!4;UBERON:0009616!3.63e-08!4;UBERON:0002240!5.00e-08!6;UBERON:0005174!5.00e-08!6;UBERON:0001137!5.00e-08!6;UBERON:0004111!7.80e-08!122;UBERON:0002257!8.67e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.53e-28,10;UBERON:0000411,2.53e-28,10;UBERON:0001950,2.53e-28,10;UBERON:0002619,5.29e-17,17;UBERON:0000956,6.59e-14,21;UBERON:0001869,6.59e-14,21;UBERON:0000203,6.59e-14,21;UBERON:0002020,1.96e-13,34;UBERON:0003528,2.92e-10,29;UBERON:0002791,2.92e-10,29;UBERON:0001893,2.92e-10,29;UBERON:0001049,5.37e-09,52;UBERON:0005068,5.37e-09,52;UBERON:0006241,5.37e-09,52;UBERON:0007135,5.37e-09,52;UBERON:0000073,1.10e-08,54;UBERON:0002780,8.71e-08,39;UBERON:0001890,8.71e-08,39;UBERON:0006240,8.71e-08,39;UBERON:0003080,1.32e-07,40;UBERON:0002346,2.08e-07,64;UBERON:0003075,2.08e-07,64;UBERON:0007284,2.08e-07,64;UBERON:0002257,3.64e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.285650984403804,0,0.122490799214954,0,0,0,0.127687338085188,0.153606533256243,0,0.365950574409639,0.52091337055676,0.279182999001381,0.56276261003168,0.30559649555362,2.06240009831567,0.854230084794618,0.186399445825301,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,0.209446706813455,0,0,0,0,0.299581278809645,0,0.125654352112864,0.521472960576829,0.255715457330331,0,0.162241263067758,0,0,0,0,0,0,0,0,0.204109497453984,0.2562274405697,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.35163505977661,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,1.38097570952153,1.14579102687879,3.95262319390481,0,0.755393897389701,0,0.900642406448441,0.906284817968409,0.51776031175182,0.103787347584177,0,0.170733605754134,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0.114870937911227,0,0.115884325944855,0,0,0,0,0,0.476872379894642,0,0,0,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p@chr12:71364422..71364433,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=135 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:71364422..71364433,- | |||
|description=CAGE_peak_at_chr12:71364422..71364433,- | |||
|id=chr12:71364422..71364433,- | |||
|ontology_enrichment_celltype=CL:0000117!6.15e-11!23;CL:0000337!6.15e-11!23;CL:0000540!6.34e-08!33;CL:0000047!6.34e-08!33;CL:0000031!6.34e-08!33;CL:0000404!6.34e-08!33;CL:0002612!8.67e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,3.64e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.00e-27!52;UBERON:0005068!5.00e-27!52;UBERON:0006241!5.00e-27!52;UBERON:0007135!5.00e-27!52;UBERON:0002346!1.35e-25!71;UBERON:0003075!1.35e-25!71;UBERON:0007284!1.35e-25!71;UBERON:0002020!1.67e-25!34;UBERON:0000033!6.64e-24!63;UBERON:0000955!7.20e-24!50;UBERON:0006238!7.20e-24!50;UBERON:0000073!1.55e-23!75;UBERON:0001016!1.55e-23!75;UBERON:0001017!5.96e-23!73;UBERON:0005743!5.96e-23!73;UBERON:0002616!2.18e-22!49;UBERON:0002791!3.63e-20!29;UBERON:0003528!3.63e-20!29;UBERON:0001893!3.63e-20!29;UBERON:0004121!6.36e-20!102;UBERON:0000924!6.36e-20!102;UBERON:0006601!6.36e-20!102;UBERON:0003056!1.30e-18!49;UBERON:0003080!1.70e-16!40;UBERON:0007811!2.74e-15!86;UBERON:0002780!3.01e-15!39;UBERON:0001890!3.01e-15!39;UBERON:0006240!3.01e-15!39;UBERON:0000153!2.72e-13!94;UBERON:0000956!2.85e-13!21;UBERON:0001869!2.85e-13!21;UBERON:0000203!2.85e-13!21;UBERON:0002021!4.46e-13!10;UBERON:0000411!4.46e-13!10;UBERON:0001950!4.46e-13!10;UBERON:0002619!2.44e-12!17;UBERON:0003076!8.53e-12!12;UBERON:0003057!8.53e-12!12;UBERON:0002298!1.69e-11!6;UBERON:0000025!6.44e-09!114;UBERON:0002420!3.22e-08!8;UBERON:0007245!3.22e-08!8;UBERON:0010009!3.22e-08!8;UBERON:0010011!3.22e-08!8;UBERON:0000454!3.22e-08!8;UBERON:0002950!3.63e-08!4;UBERON:0001891!3.63e-08!4;UBERON:0009616!3.63e-08!4;UBERON:0002240!5.00e-08!6;UBERON:0005174!5.00e-08!6;UBERON:0001137!5.00e-08!6;UBERON:0004111!7.80e-08!122;UBERON:0002257!8.67e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.53e-28,10;UBERON:0000411,2.53e-28,10;UBERON:0001950,2.53e-28,10;UBERON:0002619,5.29e-17,17;UBERON:0000956,6.59e-14,21;UBERON:0001869,6.59e-14,21;UBERON:0000203,6.59e-14,21;UBERON:0002020,1.96e-13,34;UBERON:0003528,2.92e-10,29;UBERON:0002791,2.92e-10,29;UBERON:0001893,2.92e-10,29;UBERON:0001049,5.37e-09,52;UBERON:0005068,5.37e-09,52;UBERON:0006241,5.37e-09,52;UBERON:0007135,5.37e-09,52;UBERON:0000073,1.10e-08,54;UBERON:0002780,8.71e-08,39;UBERON:0001890,8.71e-08,39;UBERON:0006240,8.71e-08,39;UBERON:0003080,1.32e-07,40;UBERON:0002346,2.08e-07,64;UBERON:0003075,2.08e-07,64;UBERON:0007284,2.08e-07,64;UBERON:0002257,3.64e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.285650984403804,0,0.122490799214954,0,0,0,0.127687338085188,0.153606533256243,0,0.365950574409639,0.52091337055676,0.279182999001381,0.56276261003168,0.30559649555362,2.06240009831567,0.854230084794618,0.186399445825301,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,0.209446706813455,0,0,0,0,0.299581278809645,0,0.125654352112864,0.521472960576829,0.255715457330331,0,0.162241263067758,0,0,0,0,0,0,0,0,0.204109497453984,0.2562274405697,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.35163505977661,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,1.38097570952153,1.14579102687879,3.95262319390481,0,0.755393897389701,0,0.900642406448441,0.906284817968409,0.51776031175182,0.103787347584177,0,0.170733605754134,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0.114870937911227,0,0.115884325944855,0,0,0,0,0,0.476872379894642,0,0,0,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:71364422..71364433,- | |||
}} |
Latest revision as of 04:37, 5 August 2015
Short description: | p@chr12:71364422..71364433, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:71364422..71364433, - |
Coexpression cluster: | MCL_coexpression_mm9:135 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 3.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.53e-28 | 10 |
visual cortex | 2.53e-28 | 10 |
neocortex | 2.53e-28 | 10 |
regional part of cerebral cortex | 5.29e-17 | 17 |
cerebral cortex | 6.59e-14 | 21 |
cerebral hemisphere | 6.59e-14 | 21 |
pallium | 6.59e-14 | 21 |
gray matter | 1.96e-13 | 34 |
brain grey matter | 2.92e-10 | 29 |
regional part of telencephalon | 2.92e-10 | 29 |
telencephalon | 2.92e-10 | 29 |
neural tube | 5.37e-09 | 52 |
neural rod | 5.37e-09 | 52 |
future spinal cord | 5.37e-09 | 52 |
neural keel | 5.37e-09 | 52 |
regional part of nervous system | 1.10e-08 | 54 |
regional part of forebrain | 8.71e-08 | 39 |
forebrain | 8.71e-08 | 39 |
future forebrain | 8.71e-08 | 39 |
anterior neural tube | 1.32e-07 | 40 |
neurectoderm | 2.08e-07 | 64 |
neural plate | 2.08e-07 | 64 |
presumptive neural plate | 2.08e-07 | 64 |
ventral horn of spinal cord | 3.64e-07 | 3 |