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FFCP PHASE1:Mm9::chr4:148478310..148478340,+: Difference between revisions

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{{FFCP|EntrezGene=13347|HGNC=|UniProt=O54786,Q8C535|association_with_transcript=48bp_to_NM_001025296,NM_010044,uc008vvq.1,uc008vvr.1_5end|description=CAGE_peak_2_at_Dffa_5end|id=chr4:148478310..148478340,+|ontology_enrichment_celltype=CL:0000117!7.13e-07!23;CL:0000337!7.13e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,7.28e-07,23;CL:0000337,7.28e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!6.25e-10!34;UBERON:0001049!7.04e-10!52;UBERON:0005068!7.04e-10!52;UBERON:0006241!7.04e-10!52;UBERON:0007135!7.04e-10!52;UBERON:0007811!3.64e-09!86;UBERON:0002616!8.50e-09!49;UBERON:0000955!9.12e-09!50;UBERON:0006238!9.12e-09!50;UBERON:0000153!9.78e-09!94;UBERON:0000483!1.56e-08!181;UBERON:0000119!3.00e-08!183;UBERON:0000064!3.41e-08!99;UBERON:0002791!4.09e-08!29;UBERON:0003528!4.09e-08!29;UBERON:0001893!4.09e-08!29;UBERON:0003080!4.57e-08!40;UBERON:0002780!6.94e-08!39;UBERON:0001890!6.94e-08!39;UBERON:0006240!6.94e-08!39;UBERON:0000033!1.34e-07!63;UBERON:0003056!1.36e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0000483,1.76e-10,174;UBERON:0000073,3.88e-10,54;UBERON:0002020,4.73e-10,34;UBERON:0000119,5.22e-10,176;UBERON:0001049,1.88e-09,52;UBERON:0005068,1.88e-09,52;UBERON:0006241,1.88e-09,52;UBERON:0007135,1.88e-09,52;UBERON:0010371,7.32e-09,73;UBERON:0002346,2.65e-08,64;UBERON:0003075,2.65e-08,64;UBERON:0007284,2.65e-08,64;UBERON:0003528,3.65e-08,29;UBERON:0002791,3.65e-08,29;UBERON:0001893,3.65e-08,29;UBERON:0003080,9.90e-08,40;UBERON:0002780,1.53e-07,39;UBERON:0001890,1.53e-07,39;UBERON:0006240,1.53e-07,39;UBERON:0002616,3.46e-07,46;UBERON:0003056,3.52e-07,49;UBERON:0000955,3.60e-07,47;UBERON:0006238,3.60e-07,47|phase1_expression=1.12104192973356,7.32848356042658,5.91499011206397,4.53696316960245,6.01074875935617,6.37941233265181,5.37309073369709,5.03580961422147,6.335492496825,7.2560003159818,3.25314139628459,2.31339261086476,3.25281386869291,4.54586092578786,0,0.202475267389826,0.699561878128147,1.41957974411207,1.91960207048034,2.97072756258621,3.74190476664707,0.297872853602656,1.30599894569468,5.11975752938901,5.04700418347774,8.03924749761028,3.4460959692726,7.54149314400612,2.09025761402011,2.52030129759931,6.20845429834853,1.27006134691926,1.84519436275371,0,1.1554064790051,1.82858109894342,1.22501613757421,0.418531630736908,0,0,0.588231488031014,0,1.45653105909346,0.251793635951155,0.405507724878058,0.367093504323363,0.782391344348039,1.09012578190223,1.5378032791413,1.36100929351998,1.53985063787899,1.43752564364972,1.67782606057736,7.97898356212479,2.01656279485478,0.771778308107841,0.573066879877513,0.515672092277442,1.61853168687678,3.1739458756322,2.53532561402472,1.0165335962074,0.889294796111139,0.449949858640699,1.97773272513395,0,0.299600110518405,0.384218305321555,1.55534418462716,1.89008313664367,1.89292465216244,3.99911378165325,5.30084498283872,2.32732518508413,1.43768206527355,0.919218786610021,2.20231761998777,7.02280359468532,6.29786786350598,3.03338461779446,3.20206752608434,2.6045668527838,12.8424179540635,6.19038871034848,5.80633341551878,4.12480019663135,1.99320353118744,2.98239113320481,0.37863096666592,0.453429360640713,0.869593466105033,4.30211938490693,0.679971333707751,3.2382191498269,5.19821133958135,5.37632264516803,5.19644354487482,0.340860645156116,0.259786004602869,0.35333957451034,1.97180787687353,0,0,0,0.865964164044856,0.760079596425296,1.01104889002957,3.4255163915718,1.03575153458869,0.593768556259299,0.867426633830679,0.608930956624282,0.691846491768175,0.904335843315735,0,0.502666365318702,1.48316980640624,0.578397427679647,4.42305275974937,0.808834249737046,2.87093973998512,3.39412677194655,0,0.585561594023094,1.67557365450764,1.27728527604296,0.718890747035522,2.39961092397363,0.127070227073065,2.24685959107234,2.74500361691176,2.51308704225729,3.65031072403781,6.39288643325826,2.70124457927428,2.59586020908412,0.407357455401265,1.99051152976149,0.758168275301024,2.31486041475121,1.69156575851515,2.29902104433473,1.26043490863744,1.05493372485001,0.816437989815934,1.40925092313335,1.59292931751539,2.06962696591213,2.15567992932842,2.45837904218165,1.40760899331159,1.7535658594206,0.834141747676794,1.0447564995665,1.02891068203972,0.59710280045548,0,0.51469581422943,0,3.31401236056803,3.28336483973535,1.80062061461015,0.946978942340841,2.36117078096885,2.93107514486019,2.09280550275367,0.536546802799238,0.817357396570186,1.48103864922132,1.47750717671186,1.70244500046297,1.46199987425332,2.85415149878366,2.41571553768669,3.57492912559016,1.02904612379284,0.660837565967596,5.55346189993443,0.853153002140936,2.55460339046482,1.41754207454303,1.4117846723634,2.00140239460383,1.52180500890047,0.949058123089023,1.97638745668813,1.00534083520108,0.795825888164603,0.974820435595601,3.59527763461689,1.08069024937347,0.597423819763102,1.70701110857774,1.94222471436539,2.25415471346161,1.22190796707189,1.55161989734101,1.61312385747733,1.96033265085198,1.77132177575523,1.56998727841375,1.1105744752962,1.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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:13347
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:O54786,uniprot:Q8C535
|association_with_transcript=48bp_to_NM_001025296,NM_010044,uc008vvq.1,uc008vvr.1_5end
|cluster_id=chr4:148478310..148478340,+
|description=CAGE_peak_2_at_Dffa_5end
|id=chr4:148478310..148478340,+
|ontology_enrichment_celltype=CL:0000117!7.13e-07!23;CL:0000337!7.13e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,7.28e-07,23;CL:0000337,7.28e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!6.25e-10!34;UBERON:0001049!7.04e-10!52;UBERON:0005068!7.04e-10!52;UBERON:0006241!7.04e-10!52;UBERON:0007135!7.04e-10!52;UBERON:0007811!3.64e-09!86;UBERON:0002616!8.50e-09!49;UBERON:0000955!9.12e-09!50;UBERON:0006238!9.12e-09!50;UBERON:0000153!9.78e-09!94;UBERON:0000483!1.56e-08!181;UBERON:0000119!3.00e-08!183;UBERON:0000064!3.41e-08!99;UBERON:0002791!4.09e-08!29;UBERON:0003528!4.09e-08!29;UBERON:0001893!4.09e-08!29;UBERON:0003080!4.57e-08!40;UBERON:0002780!6.94e-08!39;UBERON:0001890!6.94e-08!39;UBERON:0006240!6.94e-08!39;UBERON:0000033!1.34e-07!63;UBERON:0003056!1.36e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0000483,1.76e-10,174;UBERON:0000073,3.88e-10,54;UBERON:0002020,4.73e-10,34;UBERON:0000119,5.22e-10,176;UBERON:0001049,1.88e-09,52;UBERON:0005068,1.88e-09,52;UBERON:0006241,1.88e-09,52;UBERON:0007135,1.88e-09,52;UBERON:0010371,7.32e-09,73;UBERON:0002346,2.65e-08,64;UBERON:0003075,2.65e-08,64;UBERON:0007284,2.65e-08,64;UBERON:0003528,3.65e-08,29;UBERON:0002791,3.65e-08,29;UBERON:0001893,3.65e-08,29;UBERON:0003080,9.90e-08,40;UBERON:0002780,1.53e-07,39;UBERON:0001890,1.53e-07,39;UBERON:0006240,1.53e-07,39;UBERON:0002616,3.46e-07,46;UBERON:0003056,3.52e-07,49;UBERON:0000955,3.60e-07,47;UBERON:0006238,3.60e-07,47
|phase1_expression=1.12104192973356,7.32848356042658,5.91499011206397,4.53696316960245,6.01074875935617,6.37941233265181,5.37309073369709,5.03580961422147,6.335492496825,7.2560003159818,3.25314139628459,2.31339261086476,3.25281386869291,4.54586092578786,0,0.202475267389826,0.699561878128147,1.41957974411207,1.91960207048034,2.97072756258621,3.74190476664707,0.297872853602656,1.30599894569468,5.11975752938901,5.04700418347774,8.03924749761028,3.4460959692726,7.54149314400612,2.09025761402011,2.52030129759931,6.20845429834853,1.27006134691926,1.84519436275371,0,1.1554064790051,1.82858109894342,1.22501613757421,0.418531630736908,0,0,0.588231488031014,0,1.45653105909346,0.251793635951155,0.405507724878058,0.367093504323363,0.782391344348039,1.09012578190223,1.5378032791413,1.36100929351998,1.53985063787899,1.43752564364972,1.67782606057736,7.97898356212479,2.01656279485478,0.771778308107841,0.573066879877513,0.515672092277442,1.61853168687678,3.1739458756322,2.53532561402472,1.0165335962074,0.889294796111139,0.449949858640699,1.97773272513395,0,0.299600110518405,0.384218305321555,1.55534418462716,1.89008313664367,1.89292465216244,3.99911378165325,5.30084498283872,2.32732518508413,1.43768206527355,0.919218786610021,2.20231761998777,7.02280359468532,6.29786786350598,3.03338461779446,3.20206752608434,2.6045668527838,12.8424179540635,6.19038871034848,5.80633341551878,4.12480019663135,1.99320353118744,2.98239113320481,0.37863096666592,0.453429360640713,0.869593466105033,4.30211938490693,0.679971333707751,3.2382191498269,5.19821133958135,5.37632264516803,5.19644354487482,0.340860645156116,0.259786004602869,0.35333957451034,1.97180787687353,0,0,0,0.865964164044856,0.760079596425296,1.01104889002957,3.4255163915718,1.03575153458869,0.593768556259299,0.867426633830679,0.608930956624282,0.691846491768175,0.904335843315735,0,0.502666365318702,1.48316980640624,0.578397427679647,4.42305275974937,0.808834249737046,2.87093973998512,3.39412677194655,0,0.585561594023094,1.67557365450764,1.27728527604296,0.718890747035522,2.39961092397363,0.127070227073065,2.24685959107234,2.74500361691176,2.51308704225729,3.65031072403781,6.39288643325826,2.70124457927428,2.59586020908412,0.407357455401265,1.99051152976149,0.758168275301024,2.31486041475121,1.69156575851515,2.29902104433473,1.26043490863744,1.05493372485001,0.816437989815934,1.40925092313335,1.59292931751539,2.06962696591213,2.15567992932842,2.45837904218165,1.40760899331159,1.7535658594206,0.834141747676794,1.0447564995665,1.02891068203972,0.59710280045548,0,0.51469581422943,0,3.31401236056803,3.28336483973535,1.80062061461015,0.946978942340841,2.36117078096885,2.93107514486019,2.09280550275367,0.536546802799238,0.817357396570186,1.48103864922132,1.47750717671186,1.70244500046297,1.46199987425332,2.85415149878366,2.41571553768669,3.57492912559016,1.02904612379284,0.660837565967596,5.55346189993443,0.853153002140936,2.55460339046482,1.41754207454303,1.4117846723634,2.00140239460383,1.52180500890047,0.949058123089023,1.97638745668813,1.00534083520108,0.795825888164603,0.974820435595601,3.59527763461689,1.08069024937347,0.597423819763102,1.70701110857774,1.94222471436539,2.25415471346161,1.22190796707189,1.55161989734101,1.61312385747733,1.96033265085198,1.77132177575523,1.56998727841375,1.1105744752962,1.77871576252289,0.500535317148282,0.786235980452812,2.24862112384854,2.02860121388503,3.37648023653384,2.5462585178142,2.01387296215567,1.78348749452539,1.64736847912849,4.31304619582064,1.48856379067401,2.18426371180192,2.52578877947112,1.61457672169721,3.85954817090694,0.554259570499814,1.32643988239339,0.488894929326078,1.52770577197669,0.938760993154008,1.84256883185997,0,0.975668239288994,0,0,0.478364305972461,1.14704320301017,0.172684981865896,0.433947175744535,0,1.08781136763742,3.44234991113325,2.48343071674259,5.29816946959713,3.28192722458169,0.163934945376675,6.81671503451807,0.315508219416257,1.56175497718655,1.29254038639679,0.716906393857656,0.445597348164788,0.283076530788832,0.809621403349789,0.292255857911312,0,1.60660658210904,0.141940085208269,0.178065603667255,0.488660878060728,0.989820737835213,0,2.42780636154981,0.906970670894253,0.754420319023592,0.295301892880773,0.307435147943927,1.55056975900933,0.363533729477506,1.06949213515416,0.316036757935816,0,0,1.02131881726136,1.62054984628179,2.45781499187234,0.857348140126369,2.48276327099183,1.96205699362278,0.987294123612726,1.522324745573,3.28540391289194,1.27099242518292,0.882113592219848,2.4732937941222,0.807322133479528,1.68876189798836,1.55184047204077,2.29797259643086,1.1659233465194,12.6089205367147,0,0,0.370389054739423,0.565105371014073,0.683471138605126,0.686334519619568,0.509935289981566,0.559805809294632,0.690999869022119,0,1.89801596148681,1.21991680276109,0.86404272657441,0.627264888043406,1.09181281873089,0.404593039154462,0.661227645802687,1.30877970992015,0.90730481304255,0,1.12738587736838,0.448549638131936,0.496375471371293,0.583353565032143,0.258319646955462,0.337912250981556,0.234714477291508,0.911430693907651,1.04859344425711,1.44950472495604,1.15212002503146,1.89606672376907,2.22997736819181,1.02710957164827,1.81889152168913,1.79026695667481,2.58285761215644,1.32214994471966,2.36303243479324,1.31256384932592,1.98137697303,1.81487133246313,1.75424185331554,2.30908419936791,2.57129184799452,1.36038230169127,1.99787358036658,1.61484941897056,1.51096154727671,2.31827512838629,0.750729901804728,1.28206136987086,1.07184189539533,0,3.3885110557024,5.52390283808612,7.44764167471216,8.248952752497,5.48066015816514,3.7769694869485,4.72515750162264,3.15224842256954,1.81256963593682,4.14208249401456,2.07574695168353,1.19707462020309,1.36586884603307,0.972426868273176,1.67690530102386,0.919217542250071,1.33348036680969,0.618105171716683,2.56735367673452,2.02157769411038,0.50695859978048,0.565879024158229,1.96647165686753,1.15245274328765,0.976402972245426,1.90517476513229,1.39061191133827,0.77163688185482,2.88460130562315,1.76638704161277,2.74295401908332,2.12970967391205,2.14592570952589,2.18019624948493,1.12931256498397,1.86152137361688,2.0122077016005,1.31534855718921,1.49384525230448,0.561142271657738,0.830445126869219,1.37906275325789,0.818462086339379,1.39443157067369,1.15743966588685,1.49886346762768,0.701794825336225,1.28922632428979,1.14772999241306,1.32354851471709,1.85494268496337
|short_description=p2@Dffa
}}

Revision as of 04:36, 5 August 2015

Short description:p2@Dffa
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Dffa_5end
Coexpression cluster:NA
Association with transcript: 48bp_to_NM_001025296, NM_010044, uc008vvq.1, uc008vvr.1_5end
EntrezGene:13347
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Dffa

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I57.33
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.54
CD326+ enterocyte, pool2.CNhs13197.11849-124I46.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.38
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.37
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.04
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.34
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.26
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.25
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.31
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.25
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.55
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.42
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.92
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.97
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.74
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.05
GP2+ M cell, pool1.CNhs13228.11845-124H98.04
GP2+ M cell, pool2.CNhs13231.11846-124I13.45
GP2+ M cell, pool3.CNhs13240.11847-124I27.54
Ileum epithelium, pool1.CNhs13199.10252-104B92.09
Ileum epithelium, pool2.CNhs13232.10253-104C12.52
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.21
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.98
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.56
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.89
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.30
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.44
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.81
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.98
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.20
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.38
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.43
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A62.87
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F12.51
cortex, adult.CNhs10473.12-14D53.65
cortex, neonate N30.CNhs11107.1392-42F26.39
diencephalon, adult.CNhs10482.20-12F22.70
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.99
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C61.69
eyeball, embryo E14.CNhs10521.399-16E22.30
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G81.59
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E22.16
forelimb, embryo E12.CNhs10600.359-14H22.46
forelimb, embryo E13.CNhs10589.384-1E21.41
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E93.31
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I91.80
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C82.36
heart, embryo E16.CNhs11021.457-17C62.93
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I21.48
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G11.70
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D32.85
heart, neonate N30.CNhs11202.1390-42D22.42
hippocampus, adult.CNhs10478.13-16E83.57
hippocampus, neonate N00.CNhs11228.627-43G11.03
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A35.55
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D52.55
intestine, embryo E15.CNhs10602.976-16D81.42
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.98
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F81.94
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G71.61
kidney, neonate N10.CNhs11206.758-6D51.96
kidney, neonate N20.CNhs11113.832-19I11.77
kidney, neonate N25.CNhs11122.1353-25F31.57
kidney, neonate N30.CNhs11203.1385-42H11.11
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E12.25
liver, embryo E15.CNhs10520.433-16D72.03
liver, embryo E16.CNhs10523.462-17F53.38
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G42.01
liver, neonate N00.CNhs11117.641-24F41.78
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A32.53
liver, neonate N25.CNhs11198.1368-26H11.61
liver, neonate N30.CNhs11106.1382-42D13.86
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H22.48
medulla oblongata, adult.CNhs10477.17-12C25.30
medulla oblongata, neonate N30.CNhs11200.1396-42A33.28
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.82
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C72.46
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I73.29
placenta, adult pregnant day17.CNhs10464.577-18G31.27
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C32.47
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H31.69
skin, neonate N06.CNhs11097.693-20I51.55
skin, neonate N10.CNhs11108.762-6C42.30
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C912.61
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.90
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D91.05
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I42.23
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C51.82
thymus, embryo E17.CNhs10581.478-18C11.79
thymus, embryo E18.CNhs10595.1273-19G42.58
thymus, neonate N02.CNhs11181.1541-43F81.32
thymus, neonate N03.CNhs11137.2104-43C72.36
thymus, neonate N06.CNhs11197.681-26C41.31
thymus, neonate N07.CNhs11211.713-19D31.98
thymus, neonate N10.CNhs11194.748-24E41.81
thymus, neonate N20.CNhs11186.820-7A21.75
thymus, neonate N25.CNhs11125.1362-25G72.31
thymus, neonate N30.CNhs11132.1393-42G22.57
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.61
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.51
urinary bladder, adult.CNhs10481.879-12E42.32
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.52
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A37.45
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.25
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I82.08
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)7.28e-0723
neuroblast (sensu Vertebrata)7.28e-0723

Uber anatomy
Ontology termp-valuen
epithelium1.76e-10174
regional part of nervous system3.88e-1054
gray matter4.73e-1034
cell layer5.22e-10176
neural tube1.88e-0952
neural rod1.88e-0952
future spinal cord1.88e-0952
neural keel1.88e-0952
ecto-epithelium7.32e-0973
neurectoderm2.65e-0864
neural plate2.65e-0864
presumptive neural plate2.65e-0864
brain grey matter3.65e-0829
regional part of telencephalon3.65e-0829
telencephalon3.65e-0829
anterior neural tube9.90e-0840
regional part of forebrain1.53e-0739
forebrain1.53e-0739
future forebrain1.53e-0739
regional part of brain3.46e-0746
pre-chordal neural plate3.52e-0749
brain3.60e-0747
future brain3.60e-0747
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