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FFCP PHASE1:Mm9::chr15:32850859..32850878,+: Difference between revisions

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{{FFCP|EntrezGene=15529|HGNC=|MCL_coexpression_id=2968|UniProt=P43407|association_with_transcript=381bp_to_ENSMUST00000022871,NM_008304,uc007vkx.1_5end|description=CAGE_peak_4_at_Sdc2_5end|id=chr15:32850859..32850878,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!5.33e-17!122;UBERON:0000025!1.29e-16!114;UBERON:0003914!8.75e-11!47;UBERON:0005256!3.38e-09!47;UBERON:0009569!3.59e-08!66;UBERON:0002100!7.66e-08!98;UBERON:0002107!4.76e-07!22;UBERON:0007499!4.76e-07!22;UBERON:0006925!4.76e-07!22;UBERON:0009497!4.76e-07!22;UBERON:0000015!4.76e-07!22;UBERON:0002423!4.76e-07!22;UBERON:0006235!4.76e-07!22;UBERON:0008835!4.76e-07!22;UBERON:0003894!4.76e-07!22;UBERON:0004161!4.76e-07!22;UBERON:0008836!4.76e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0004111,5.02e-16,122;UBERON:0000025,2.55e-15,114;UBERON:0003104,7.09e-13,61;UBERON:0009142,7.09e-13,61;UBERON:0005256,7.81e-12,45;UBERON:0003914,5.52e-11,47;UBERON:0002100,3.84e-10,90;UBERON:0009569,7.74e-10,66;UBERON:0002107,5.78e-09,22;UBERON:0007499,5.78e-09,22;UBERON:0006925,5.78e-09,22;UBERON:0009497,5.78e-09,22;UBERON:0000015,5.78e-09,22;UBERON:0002423,5.78e-09,22;UBERON:0006235,5.78e-09,22;UBERON:0008835,5.78e-09,22;UBERON:0003894,5.78e-09,22;UBERON:0004161,5.78e-09,22;UBERON:0008836,5.78e-09,22;UBERON:0009854,2.65e-08,23;UBERON:0009856,2.65e-08,23;UBERON:0005177,7.32e-08,79;UBERON:0005172,1.47e-07,49;UBERON:0005173,1.47e-07,49;UBERON:0002417,1.47e-07,49;UBERON:0000916,1.47e-07,49;UBERON:0002365,3.71e-07,25;UBERON:0002330,3.71e-07,25|phase1_expression=1.44133962394315,0,0,0,0,0.33575854382378,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0.261199789138935,0.47997726838022,0,0.57423196411502,0.430761996159075,0,0.380046838912748,0,0.665191531965914,0,0,0,1.1554064790051,1.32987716286794,0.612508068787107,0,0,0,0,0,0,2.64383317748712,1.72340783073175,4.03802854755699,0,1.52617609466313,3.73466510648602,4.27745777963423,0.979904951377538,1.43752564364972,0,0,0,3.34437266846731,4.29800159908135,5.67239301505187,0.202316460859598,0,0,0,0,0,0.988866362566974,0,0.599200221036809,0,0,0,0,0.285650984403804,0.883474163806454,0,0.0958454710182364,0,1.10115880999389,2.29837208553338,1.53606533256243,0.527545150920775,0,0,1.67509799400829,3.93933827022176,1.5279824777681,0.589257170947335,1.28134512719193,0.186399445825301,0.075726193333184,0.377857800533928,1.15945795480671,6.88339101585109,5.439770669662,8.09554787456726,12.3457519315057,8.96053774194671,3.08977724289854,5.11290967734173,4.1565760736459,3.5333957451034,2.25349471642689,3.84979432242953,0,0,0,0.506719730950197,0,2.74041311325744,0.776813650941515,1.48442139064825,0,1.21786191324856,0.922461989024234,1.65794904607885,1.05829836422134,2.13633205260448,0.741584903203122,1.01219549843938,0,1.61766849947409,0.883366073841574,0.969750506270444,0,1.17112318804619,0.628340120440365,0.510914110417183,0,0,0,1.04853447583376,2.28750301409313,0.753926112677186,2.43354048269187,1.27857728665165,3.1168206683934,2.10913641988085,1.2220723662038,1.24406970610093,0.505445516867349,0.841767423545896,0.650602214813519,0.459804208866946,0.720248519221397,1.05493372485001,0.544291993210623,0.512454881139399,0.843315521037559,0.517406741478031,0.215567992932842,0.378212160335639,0.351902248327898,0.219195732427575,1.39023624612799,0.348252166522167,0.823128545631774,0.398068533636986,0,0,0.284163499395593,0.621377317606506,0.469052119962192,1.62055855314913,1.65721314909647,1.18058539048442,1.69693824176116,0.697601834251224,1.07309360559848,0.817357396570186,0.493679549740441,0.985004784474571,1.4592385718254,0.877199924551994,0.439100230582101,1.07365135008297,0.841159794256509,0.720332286654991,0.330418782983798,0,1.06644125267617,0.232236671860439,0.38660238396628,0.201683524623343,0.889512175379481,0.951128130562796,0.474529061544512,0.329397909448022,0.502670417600539,0.596869416123452,0.58489226135736,0,0.216138049874694,1.59313018603494,0.569003702859245,0.571242563048644,1.1270773567308,0.407302655690628,1.16371492300575,1.1221731182451,1.13825766823663,1.62371162777562,2.511979645462,1.85095745882701,9.78293669387591,0.333690211432188,0.196558995113203,0,0.608580364165509,0.72353147925725,1.01850340712568,1.15078454980324,4.05338066937588,3.0201755450689,1.43768206527355,4.46569137202204,4.99260276983297,7.82994521636046,5.20252499213545,11.5786445127208,2.77129785249907,1.51593129416388,0.651859905768103,0.678980343100753,0.704070744865506,1.50755631697634,2.38043640886014,0.975668239288994,1.89162172927429,2.6575762757853,3.02964060449226,2.62181303545181,3.7990696010497,2.4590339958857,0,0,0.491764273019036,0.275936746304732,1.76605648986571,4.21962071731931,3.44263385291018,3.7870639080656,0,0.390438744296638,0.646270193198397,0,0.668396022247182,0,1.21443210502468,0.292255857911312,0,0.963963949265421,1.13552068166615,0.534196811001766,1.95464351224291,1.31976098378028,1.3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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:15529
|HGNC=
|MCL_coexpression_id=2968
|TSSclassifier=NA
|UniProt=uniprot:P43407
|association_with_transcript=381bp_to_ENSMUST00000022871,NM_008304,uc007vkx.1_5end
|cluster_id=chr15:32850859..32850878,+
|description=CAGE_peak_4_at_Sdc2_5end
|id=chr15:32850859..32850878,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004111!5.33e-17!122;UBERON:0000025!1.29e-16!114;UBERON:0003914!8.75e-11!47;UBERON:0005256!3.38e-09!47;UBERON:0009569!3.59e-08!66;UBERON:0002100!7.66e-08!98;UBERON:0002107!4.76e-07!22;UBERON:0007499!4.76e-07!22;UBERON:0006925!4.76e-07!22;UBERON:0009497!4.76e-07!22;UBERON:0000015!4.76e-07!22;UBERON:0002423!4.76e-07!22;UBERON:0006235!4.76e-07!22;UBERON:0008835!4.76e-07!22;UBERON:0003894!4.76e-07!22;UBERON:0004161!4.76e-07!22;UBERON:0008836!4.76e-07!22
|ontology_enrichment_uberon_v019_2=UBERON:0004111,5.02e-16,122;UBERON:0000025,2.55e-15,114;UBERON:0003104,7.09e-13,61;UBERON:0009142,7.09e-13,61;UBERON:0005256,7.81e-12,45;UBERON:0003914,5.52e-11,47;UBERON:0002100,3.84e-10,90;UBERON:0009569,7.74e-10,66;UBERON:0002107,5.78e-09,22;UBERON:0007499,5.78e-09,22;UBERON:0006925,5.78e-09,22;UBERON:0009497,5.78e-09,22;UBERON:0000015,5.78e-09,22;UBERON:0002423,5.78e-09,22;UBERON:0006235,5.78e-09,22;UBERON:0008835,5.78e-09,22;UBERON:0003894,5.78e-09,22;UBERON:0004161,5.78e-09,22;UBERON:0008836,5.78e-09,22;UBERON:0009854,2.65e-08,23;UBERON:0009856,2.65e-08,23;UBERON:0005177,7.32e-08,79;UBERON:0005172,1.47e-07,49;UBERON:0005173,1.47e-07,49;UBERON:0002417,1.47e-07,49;UBERON:0000916,1.47e-07,49;UBERON:0002365,3.71e-07,25;UBERON:0002330,3.71e-07,25
|phase1_expression=1.44133962394315,0,0,0,0,0.33575854382378,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0.261199789138935,0.47997726838022,0,0.57423196411502,0.430761996159075,0,0.380046838912748,0,0.665191531965914,0,0,0,1.1554064790051,1.32987716286794,0.612508068787107,0,0,0,0,0,0,2.64383317748712,1.72340783073175,4.03802854755699,0,1.52617609466313,3.73466510648602,4.27745777963423,0.979904951377538,1.43752564364972,0,0,0,3.34437266846731,4.29800159908135,5.67239301505187,0.202316460859598,0,0,0,0,0,0.988866362566974,0,0.599200221036809,0,0,0,0,0.285650984403804,0.883474163806454,0,0.0958454710182364,0,1.10115880999389,2.29837208553338,1.53606533256243,0.527545150920775,0,0,1.67509799400829,3.93933827022176,1.5279824777681,0.589257170947335,1.28134512719193,0.186399445825301,0.075726193333184,0.377857800533928,1.15945795480671,6.88339101585109,5.439770669662,8.09554787456726,12.3457519315057,8.96053774194671,3.08977724289854,5.11290967734173,4.1565760736459,3.5333957451034,2.25349471642689,3.84979432242953,0,0,0,0.506719730950197,0,2.74041311325744,0.776813650941515,1.48442139064825,0,1.21786191324856,0.922461989024234,1.65794904607885,1.05829836422134,2.13633205260448,0.741584903203122,1.01219549843938,0,1.61766849947409,0.883366073841574,0.969750506270444,0,1.17112318804619,0.628340120440365,0.510914110417183,0,0,0,1.04853447583376,2.28750301409313,0.753926112677186,2.43354048269187,1.27857728665165,3.1168206683934,2.10913641988085,1.2220723662038,1.24406970610093,0.505445516867349,0.841767423545896,0.650602214813519,0.459804208866946,0.720248519221397,1.05493372485001,0.544291993210623,0.512454881139399,0.843315521037559,0.517406741478031,0.215567992932842,0.378212160335639,0.351902248327898,0.219195732427575,1.39023624612799,0.348252166522167,0.823128545631774,0.398068533636986,0,0,0.284163499395593,0.621377317606506,0.469052119962192,1.62055855314913,1.65721314909647,1.18058539048442,1.69693824176116,0.697601834251224,1.07309360559848,0.817357396570186,0.493679549740441,0.985004784474571,1.4592385718254,0.877199924551994,0.439100230582101,1.07365135008297,0.841159794256509,0.720332286654991,0.330418782983798,0,1.06644125267617,0.232236671860439,0.38660238396628,0.201683524623343,0.889512175379481,0.951128130562796,0.474529061544512,0.329397909448022,0.502670417600539,0.596869416123452,0.58489226135736,0,0.216138049874694,1.59313018603494,0.569003702859245,0.571242563048644,1.1270773567308,0.407302655690628,1.16371492300575,1.1221731182451,1.13825766823663,1.62371162777562,2.511979645462,1.85095745882701,9.78293669387591,0.333690211432188,0.196558995113203,0,0.608580364165509,0.72353147925725,1.01850340712568,1.15078454980324,4.05338066937588,3.0201755450689,1.43768206527355,4.46569137202204,4.99260276983297,7.82994521636046,5.20252499213545,11.5786445127208,2.77129785249907,1.51593129416388,0.651859905768103,0.678980343100753,0.704070744865506,1.50755631697634,2.38043640886014,0.975668239288994,1.89162172927429,2.6575762757853,3.02964060449226,2.62181303545181,3.7990696010497,2.4590339958857,0,0,0.491764273019036,0.275936746304732,1.76605648986571,4.21962071731931,3.44263385291018,3.7870639080656,0,0.390438744296638,0.646270193198397,0,0.668396022247182,0,1.21443210502468,0.292255857911312,0,0.963963949265421,1.13552068166615,0.534196811001766,1.95464351224291,1.31976098378028,1.32745138339963,0.485561272309963,0.302323556964751,0,0.295301892880773,0.307435147943927,1.29214146584111,0.363533729477506,0,0.948110273807448,0,0,5.7874732978144,0.36012218806262,0.776152102696527,1.07168517515796,0.532020700926821,0.891844088010353,1.48094118541909,1.2178597964584,0,0.42366414172764,2.20528398054962,0.32977250588296,1.13025098687134,0.904693873922338,1.3130957840345,0.328281799490123,1.1659233465194,3.70850604021019,0,0.412773735926445,0.185194527369712,0.188368457004691,0,0,0,0,0,1.90934123603023,1.42351197111511,0.813277868507395,0.648032044930808,2.09088296014469,0.655087691238533,0.944050424693745,1.23980183588004,1.04702376793612,2.07383957266869,0,0,0.598066184175915,0.827292452285488,0.388902376688095,1.03327858782185,0.337912250981556,1.05621514781179,0.651021924219751,0.314578033277133,0.966336483304024,0.288030006257865,0,0,0.205421914329655,0,0.179026695667481,0,0.240390899039938,0.147689527174577,0.302899349844443,0,0,0.0974578807397524,0.0962118416403295,0,0.453460767230423,0.221985953374065,0.0897138566094757,0,2.12508553435409,1.50145980360946,2.01466786693992,0.214368379079066,0.501572104035363,1.12950368523413,0.460325236507177,0.572895513439397,0.68741272937475,0.685082519770642,0.755393897389701,1.35004500046361,1.80128481289688,0.906284817968409,1.03552062350364,0.415149390336707,0.399024873401031,0,0.243106717068294,0.209613162627982,0.183843508450014,0.44449345560323,0.824140228955577,0,1.26348605881899,0.50695859978048,0.377252682772152,0.468207537349412,0.448176066834085,0.631790158511746,0.952587382566147,0.231768651889711,0.77163688185482,0.824171801606613,0.735994600671987,0.685738504770831,0.70990322463735,0.715308569841963,0.436039249896986,0.658765662907314,0.761531471025089,0.365855945745545,1.05227884575137,0.679020569229309,0.561142271657738,0.474540072496697,0.689531376628944,0.818462086339379,0.464810523557898,1.15743966588685,0.499621155875892,1.16965804222704,0.859484216193193,0.956441660344217,1.10295709559758,2.55054619182464
|short_description=p4@Sdc2
}}

Revision as of 04:36, 5 August 2015

Short description:p4@Sdc2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Sdc2_5end
Coexpression cluster:MCL_coexpression_mm9:2968
Association with transcript: 381bp_to_ENSMUST00000022871, NM_008304, uc007vkx.1_5end
EntrezGene:15529
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p4@Sdc2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.72
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.04
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.73
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.34
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.30
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.67
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C88.10
Mouse hepatocyte, donor6.CNhs13090.11822-124F412.35
Mouse hepatocyte, donor8.CNhs13091.11824-124F68.96
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.53
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.25
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.74
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D71.48
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I32.14
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D52.43
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B22.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.24
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G11.46
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G11.59
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G71.12
kidney, neonate N10.CNhs11206.758-6D51.14
kidney, neonate N20.CNhs11113.832-19I11.62
kidney, neonate N25.CNhs11122.1353-25F32.51
kidney, neonate N30.CNhs11203.1385-42H11.85
liver, adult pregnant day01.CNhs10466.508-5B29.78
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F44.05
liver, neonate N03.CNhs11123.1345-25G23.02
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H24.47
liver, neonate N10.CNhs11115.751-24B94.99
liver, neonate N20.CNhs11220.823-25A37.83
liver, neonate N25.CNhs11198.1368-26H15.20
liver, neonate N30.CNhs11106.1382-42D111.58
lung, adult.CNhs10474.28-22B12.77
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I62.38
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E51.89
lung, neonate N07.CNhs11111.715-19A32.66
lung, neonate N10.CNhs11219.750-23E63.03
lung, neonate N20.CNhs11109.822-18A42.62
lung, neonate N25.CNhs11119.1359-25C73.80
lung, neonate N30.CNhs11133.1394-42H22.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.77
medulla oblongata, neonate N30.CNhs11200.1396-42A34.22
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.44
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.79
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I41.95
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G85.79
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F82.21
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H30.90
skin, neonate N06.CNhs11097.693-20I51.31
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C93.71
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E31.42
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D52.09
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A91.24
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I12.07
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E52.01
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B42.55





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
anatomical conduit5.02e-16122
tube2.55e-15114
mesenchyme7.09e-1361
entire embryonic mesenchyme7.09e-1361
trunk mesenchyme7.81e-1245
epithelial tube5.52e-1147
trunk3.84e-1090
subdivision of trunk7.74e-1066
liver5.78e-0922
epithelial sac5.78e-0922
digestive gland5.78e-0922
epithelium of foregut-midgut junction5.78e-0922
anatomical boundary5.78e-0922
hepatobiliary system5.78e-0922
foregut-midgut junction5.78e-0922
hepatic diverticulum5.78e-0922
liver primordium5.78e-0922
septum transversum5.78e-0922
liver bud5.78e-0922
digestive tract diverticulum2.65e-0823
sac2.65e-0823
trunk region element7.32e-0879
abdomen element1.47e-0749
abdominal segment element1.47e-0749
abdominal segment of trunk1.47e-0749
abdomen1.47e-0749
exocrine gland3.71e-0725
exocrine system3.71e-0725
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