FFCP PHASE1:Mm9::chr2:4322585..4322602,+: Difference between revisions
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{{FFCP|EntrezGene=209630|HGNC=|MCL_coexpression_id=3352|UniProt=B1AXK0|association_with_transcript=68bp_to_ENSMUST00000115039_5end|description=CAGE_peak_21_at_Frmd4a_5end|id=chr2:4322585..4322602,+|ontology_enrichment_celltype=CL:0000393!9.01e-08!39;CL:0000211!9.01e-08!39;CL:0000107!1.78e-07!9;CL:0000540!9.97e-07!33;CL:0000047!9.97e-07!33;CL:0000031!9.97e-07!33;CL:0000404!9.97e-07!33|ontology_enrichment_celltype_v019_2=CL:0000107,6.61e-19,9;CL:0000393,1.13e-11,39;CL:0000211,1.13e-11,39;CL:0000540,1.57e-09,33;CL:0000047,1.57e-09,33;CL:0000031,1.57e-09,33;CL:0000404,1.57e-09,33;CL:0002319,3.98e-09,43;CL:0000221,7.90e-09,44;CL:0000133,7.90e-09,44;CL:0000215,1.75e-07,3;CL:0002321,2.51e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!6.25e-09!11;UBERON:0002410!1.78e-07!9;UBERON:0000073!8.03e-07!75;UBERON:0001016!8.03e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0000010,3.63e-23,11;UBERON:0002410,6.61e-19,9;UBERON:0010708,1.83e-11,8;UBERON:0002102,3.63e-10,7;UBERON:0004710,3.63e-10,7;UBERON:0005419,3.63e-10,7;UBERON:0005417,3.63e-10,7;UBERON:0005729,3.63e-10,7;UBERON:0000013,1.83e-07,3;UBERON:0000011,2.22e-07,3;UBERON:0010313,3.09e-07,3;UBERON:0002342,3.09e-07,3;UBERON:0002005,3.09e-07,3;UBERON:0005428,3.09e-07,3;UBERON:0005062,3.09e-07,3|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76255545165808,1.31790010585369,1.28482726513177,0.782391344348039,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0.514518872071894,0.573066879877513,0,1.01158230429799,0.528990979272033,0.633831403506179,1.0165335962074,0.889294796111139,0.449949858640699,0,0.7104801149461,0.299600110518405,0,1.14058573539325,0.810035629990144,0.630974884054146,0.571301968807607,0.220868540951614,0.734944795289724,0.766763768145891,3.67687514644008,0,0.127687338085188,1.53606533256243,0.131886287730194,0.274462930807229,1.56274011167028,0.279182999001381,0,0.763991238884051,0.294628585473668,0,0.559198337475902,4.54357159999104,3.92972112555285,1.44932244350839,0,0,0,0,0,0,0.511290967734173,0,0.70667914902068,0.563373679106722,0,0,0,0.216491041011214,0,0.505524445014783,0,1.03575153458869,0.148442139064825,0.867426633830679,0.608930956624282,0,0.60289056221049,0.23517741427141,0,0,0.289198713839823,0,0.323533699894818,0.441683036920787,0.484875253135222,0,0.292780797011547,0.209446706813455,0,0,0,0,0.898743836428936,0.457500602818626,0.628271760564322,0.695297280769106,1.27857728665165,0.62336413367868,0.486723789203273,0.101839363850316,0.622034853050465,0,0.210441855886474,0.520481771850815,0,0.180062129805349,0.30140963567143,0.136072998302656,0.12811372028485,0.187403449119458,0.258703370739016,2.37124792226126,3.02569728268511,1.75951124163949,1.53437012699302,0.556094498451196,1.0447564995665,1.4404749548556,0.59710280045548,0,0,0,0.207125772535502,0.234526059981096,0.36012412292203,0.473489471170421,0.196764231747404,0.771335564436891,0.232533944750408,0,0.700592054203017,0.493679549740441,0.656669856316381,0.810688095458557,0.292399974850665,0,0.671032093801859,1.05144974282064,0.205809224758569,0,0,1.06644125267617,0.696710015581316,0.644337306610467,0.403367049246685,0,0.380451252225118,0.474529061544512,0.329397909448022,0.502670417600539,0.397912944082302,0.58489226135736,0,0,0,0.569003702859245,0.571242563048644,1.1270773567308,1.22190796707189,0,0.49095073923223,0.379419222745544,0.147610147979602,0.156998727841375,0.370191491765402,0,0.667380422864376,0,0,0,0,0.763877555344259,0.287696137450811,0,0,0,0.372140947668503,0.624075346229121,0.252578877947112,0.179397413521912,0,0.369506380333209,0.568474235311454,0.977789858652155,0.509235257325564,0.704070744865506,1.17254380209271,1.19021820443007,0.975668239288994,0.630540576424764,0.44292937929755,0.797273843287435,1.3109065177259,0.518054945597687,0.144649058581512,1.50791283939272,1.08781136763742,0,0.275936746304732,0.963303539926752,0.703270119553219,0.163934945376675,0,3.15508219416257,3.12350995437311,1.29254038639679,2.62865677747807,2.89638276307112,1.98153571552183,3.64329631507405,2.63030272120181,1.97643888973262,0.642642632843614,0.283880170416537,0,0.325773918707152,0.329940245945071,0,0.242780636154981,1.51161778482376,0.188605079755898,0,0.614870295887855,0,1.09060118843252,0.356497378384721,0.316036757935816,0,0,0,0.720244376125241,0.258717367565509,0.643011105094777,0.532020700926821,0.535106452806212,0.493647061806363,0,0.704015124191131,0.42366414172764,0,0.49465875882444,0.968786560175433,0.72375509913787,0.119372344003136,0.164140899745061,0,0.556275906031529,0,0.619160603889667,0.925972636848558,0.188368457004691,0.136694227721025,0.228778173206523,0.169978429993855,0,0.138199973804424,0.954670618015114,0.474503990371703,0.203319467126849,0.540026704109006,0,0.218362563746178,0.404593039154462,0,0.26175594198403,0.129614973291793,0,0,1.04661582230785,0.66183396182839,0.194451188344048,0.516639293910924,0.1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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:209630 | |||
|HGNC= | |||
|MCL_coexpression_id=3352 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:B1AXK0 | |||
|association_with_transcript=68bp_to_ENSMUST00000115039_5end | |||
|cluster_id=chr2:4322585..4322602,+ | |||
|description=CAGE_peak_21_at_Frmd4a_5end | |||
|id=chr2:4322585..4322602,+ | |||
|ontology_enrichment_celltype=CL:0000393!9.01e-08!39;CL:0000211!9.01e-08!39;CL:0000107!1.78e-07!9;CL:0000540!9.97e-07!33;CL:0000047!9.97e-07!33;CL:0000031!9.97e-07!33;CL:0000404!9.97e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,6.61e-19,9;CL:0000393,1.13e-11,39;CL:0000211,1.13e-11,39;CL:0000540,1.57e-09,33;CL:0000047,1.57e-09,33;CL:0000031,1.57e-09,33;CL:0000404,1.57e-09,33;CL:0002319,3.98e-09,43;CL:0000221,7.90e-09,44;CL:0000133,7.90e-09,44;CL:0000215,1.75e-07,3;CL:0002321,2.51e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!6.25e-09!11;UBERON:0002410!1.78e-07!9;UBERON:0000073!8.03e-07!75;UBERON:0001016!8.03e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,3.63e-23,11;UBERON:0002410,6.61e-19,9;UBERON:0010708,1.83e-11,8;UBERON:0002102,3.63e-10,7;UBERON:0004710,3.63e-10,7;UBERON:0005419,3.63e-10,7;UBERON:0005417,3.63e-10,7;UBERON:0005729,3.63e-10,7;UBERON:0000013,1.83e-07,3;UBERON:0000011,2.22e-07,3;UBERON:0010313,3.09e-07,3;UBERON:0002342,3.09e-07,3;UBERON:0002005,3.09e-07,3;UBERON:0005428,3.09e-07,3;UBERON:0005062,3.09e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76255545165808,1.31790010585369,1.28482726513177,0.782391344348039,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0.514518872071894,0.573066879877513,0,1.01158230429799,0.528990979272033,0.633831403506179,1.0165335962074,0.889294796111139,0.449949858640699,0,0.7104801149461,0.299600110518405,0,1.14058573539325,0.810035629990144,0.630974884054146,0.571301968807607,0.220868540951614,0.734944795289724,0.766763768145891,3.67687514644008,0,0.127687338085188,1.53606533256243,0.131886287730194,0.274462930807229,1.56274011167028,0.279182999001381,0,0.763991238884051,0.294628585473668,0,0.559198337475902,4.54357159999104,3.92972112555285,1.44932244350839,0,0,0,0,0,0,0.511290967734173,0,0.70667914902068,0.563373679106722,0,0,0,0.216491041011214,0,0.505524445014783,0,1.03575153458869,0.148442139064825,0.867426633830679,0.608930956624282,0,0.60289056221049,0.23517741427141,0,0,0.289198713839823,0,0.323533699894818,0.441683036920787,0.484875253135222,0,0.292780797011547,0.209446706813455,0,0,0,0,0.898743836428936,0.457500602818626,0.628271760564322,0.695297280769106,1.27857728665165,0.62336413367868,0.486723789203273,0.101839363850316,0.622034853050465,0,0.210441855886474,0.520481771850815,0,0.180062129805349,0.30140963567143,0.136072998302656,0.12811372028485,0.187403449119458,0.258703370739016,2.37124792226126,3.02569728268511,1.75951124163949,1.53437012699302,0.556094498451196,1.0447564995665,1.4404749548556,0.59710280045548,0,0,0,0.207125772535502,0.234526059981096,0.36012412292203,0.473489471170421,0.196764231747404,0.771335564436891,0.232533944750408,0,0.700592054203017,0.493679549740441,0.656669856316381,0.810688095458557,0.292399974850665,0,0.671032093801859,1.05144974282064,0.205809224758569,0,0,1.06644125267617,0.696710015581316,0.644337306610467,0.403367049246685,0,0.380451252225118,0.474529061544512,0.329397909448022,0.502670417600539,0.397912944082302,0.58489226135736,0,0,0,0.569003702859245,0.571242563048644,1.1270773567308,1.22190796707189,0,0.49095073923223,0.379419222745544,0.147610147979602,0.156998727841375,0.370191491765402,0,0.667380422864376,0,0,0,0,0.763877555344259,0.287696137450811,0,0,0,0.372140947668503,0.624075346229121,0.252578877947112,0.179397413521912,0,0.369506380333209,0.568474235311454,0.977789858652155,0.509235257325564,0.704070744865506,1.17254380209271,1.19021820443007,0.975668239288994,0.630540576424764,0.44292937929755,0.797273843287435,1.3109065177259,0.518054945597687,0.144649058581512,1.50791283939272,1.08781136763742,0,0.275936746304732,0.963303539926752,0.703270119553219,0.163934945376675,0,3.15508219416257,3.12350995437311,1.29254038639679,2.62865677747807,2.89638276307112,1.98153571552183,3.64329631507405,2.63030272120181,1.97643888973262,0.642642632843614,0.283880170416537,0,0.325773918707152,0.329940245945071,0,0.242780636154981,1.51161778482376,0.188605079755898,0,0.614870295887855,0,1.09060118843252,0.356497378384721,0.316036757935816,0,0,0,0.720244376125241,0.258717367565509,0.643011105094777,0.532020700926821,0.535106452806212,0.493647061806363,0,0.704015124191131,0.42366414172764,0,0.49465875882444,0.968786560175433,0.72375509913787,0.119372344003136,0.164140899745061,0,0.556275906031529,0,0.619160603889667,0.925972636848558,0.188368457004691,0.136694227721025,0.228778173206523,0.169978429993855,0,0.138199973804424,0.954670618015114,0.474503990371703,0.203319467126849,0.540026704109006,0,0.218362563746178,0.404593039154462,0,0.26175594198403,0.129614973291793,0,0,1.04661582230785,0.66183396182839,0.194451188344048,0.516639293910924,0.168956125490778,0.352071715937262,0,0.209718688851422,0,0.288030006257865,0,0.202725215290164,0.205421914329655,0,0.179026695667481,0,0,0.295379054349154,0,0.0762068066549998,0,0.0974578807397524,0.288635524920988,0.233753804363138,0.226730383615211,0,0,0,0.19318959403219,0.93841237725591,0.183151624267265,0,0,0,0,0.572895513439397,0.68741272937475,0.685082519770642,0.755393897389701,0,0,0.906284817968409,0.51776031175182,0.726511433089237,1.19707462020309,0.853668028770671,0.486213434136588,0.209613162627982,0.183843508450014,0.888986911206461,0.618105171716683,0.64183841918363,1.01078884705519,0.50695859978048,0.754505365544305,0.561849044819294,0.320125762024346,0.918967503289812,0.952587382566147,0.347652977834566,0.578727661391115,0,0.588795680537589,0.342869252385415,0.354951612318675,0,0.145346416632329,0.564656282491984,0.507687647350059,0.914639864363863,1.05227884575137,0.679020569229309,1.12228454331548,0.593175090620871,1.28055827088233,0.409231043169689,0.77468420592983,0.964533054905707,0,1.63752125911786,0.644613162144895,0.57386499620653,0.441182838239031,0.231867835620421 | |||
|short_description=p21@Frmd4a | |||
}} |
Revision as of 04:26, 5 August 2015
Short description: | p21@Frmd4a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_21_at_Frmd4a_5end |
Coexpression cluster: | MCL_coexpression_mm9:3352 |
Association with transcript: | 68bp_to_ENSMUST00000115039_5end |
EntrezGene: | 209630 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 6.61e-19 | 9 |
electrically responsive cell | 1.13e-11 | 39 |
electrically active cell | 1.13e-11 | 39 |
neuron | 1.57e-09 | 33 |
neuronal stem cell | 1.57e-09 | 33 |
neuroblast | 1.57e-09 | 33 |
electrically signaling cell | 1.57e-09 | 33 |
neural cell | 3.98e-09 | 43 |
ectodermal cell | 7.90e-09 | 44 |
neurectodermal cell | 7.90e-09 | 44 |
barrier cell | 1.75e-07 | 3 |
embryonic cell | 2.51e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 3.63e-23 | 11 |
autonomic nervous system | 6.61e-19 | 9 |
pectoral complex | 1.83e-11 | 8 |
forelimb | 3.63e-10 | 7 |
pectoral appendage | 3.63e-10 | 7 |
pectoral appendage bud | 3.63e-10 | 7 |
forelimb bud | 3.63e-10 | 7 |
forelimb/pectoral fin field | 3.63e-10 | 7 |
sympathetic nervous system | 1.83e-07 | 3 |
parasympathetic nervous system | 2.22e-07 | 3 |
neural crest-derived structure | 3.09e-07 | 3 |
neural crest | 3.09e-07 | 3 |
enteric nervous system | 3.09e-07 | 3 |
vagal neural crest | 3.09e-07 | 3 |
neural fold | 3.09e-07 | 3 |