FFCP PHASE1:Mm9::chr4:147514620..147514661,+: Difference between revisions
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{{FFCP|EntrezGene=71890|HGNC=|MCL_coexpression_id=0|UniProt=A2A7G8,Q9D752|association_with_transcript=21bp_to_NM_027985,uc008vuc.1_5end|description=CAGE_peak_5_at_Mad2l2_5end|id=chr4:147514620..147514661,+|ontology_enrichment_celltype=CL:0000548!5.86e-08!115;CL:0000004!5.86e-08!115;CL:0000255!5.86e-08!115;CL:0000221!1.00e-07!44;CL:0000133!1.00e-07!44;CL:0002319!2.54e-07!43;CL:0000144!3.09e-07!121;CL:0000012!3.09e-07!121;CL:0002321!7.85e-07!70;CL:0000220!7.85e-07!70;CL:0002371!8.42e-07!118|ontology_enrichment_celltype_v019_2=CL:0002321,9.84e-10,70;CL:0000221,2.35e-09,44;CL:0000133,2.35e-09,44;CL:0002319,9.87e-09,43;CL:0000117,5.12e-08,23;CL:0000337,5.12e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002240,5.85e-07,6;UBERON:0005174,5.85e-07,6;UBERON:0001137,5.85e-07,6|phase1_expression=2.08193501236232,2.44282785347553,5.45999087267443,3.32710632437513,2.00358291978539,0.839396359559449,1.16806320297763,0,1.12630977721333,1.87251621057595,0.68487187290202,1.11681022593471,0.171200729931206,0.34968160967599,1.33243904726265,1.41732687172878,0,0.473193248037357,0,0.84877930359606,5.6128571499706,1.19149141441062,0.261199789138935,0.799962113967033,1.60586496747019,6.89078356938024,0.430761996159075,2.58565479223067,0.380046838912748,0.252030129759931,2.21730510655305,2.54012269383853,1.23012957516914,0,0,0.332469290716985,0.816677425049476,0,0,0,0,0,0,0,0.202753862439029,0,2.34717403304412,0.218025156380447,0.878744730937887,1.55543919259427,1.53985063787899,1.43752564364972,0.335565212115473,1.45072428402269,0,0.771778308107841,0.573066879877513,0,4.45096213891115,4.23192783417626,1.26766280701236,1.69422266034566,1.77858959222228,0.449949858640699,0,0,2.39680088414724,5.76327457982332,1.97010263386108,2.56511282830212,1.68259969081106,3.99911378165325,3.75476519617743,0.857435594504678,1.24599112323707,0,0,0.766124028511126,0.921639199537461,2.1101806036831,2.92760459527711,0.52091337055676,1.95428099300967,0,0.916789486660861,3.53554302568401,2.70506193518296,1.67759501242771,1.28734528666413,0.831287161174641,0.869593466105033,5.16254326188832,4.0798280022465,2.15881276655127,0,1.34408066129201,1.12355536105401,0.681721290312231,0.259786004602869,0.35333957451034,1.97180787687353,0,0,0,0.865964164044856,1.01343946190039,1.01104889002957,1.37020655662872,0,0.742210695324124,0.693941307064543,0.608930956624282,0.230615497256059,0.60289056221049,0,0.251333182659351,2.47194967734374,0.144599356919912,0.884610551949874,0.161766849947409,0.441683036920787,1.45462575940567,0,0.585561594023094,0.41889341362691,0.255457055208591,0.838705871541442,1.19980546198682,1.27070227073065,0.449371918214468,1.37250180845588,1.13088916901578,0.173824320192276,0.511430914660661,0.41557608911912,0.811206315338788,0.305518091550949,0.373220911830279,0.252722758433675,0,0.650602214813519,0.689706313300419,1.26043490863744,1.05493372485001,0.476255494059295,0,0.749613796477831,0,1.5089759505299,0.756424320671277,0.703804496655795,0.657587197282725,0.278047249225598,0.348252166522167,0.411564272815887,0.796137067273973,0,0.772043721344145,0.852490498186778,0.621377317606506,0.234526059981096,0,0.23674473558521,0,0.308534225774757,0.697601834251224,0,0.467061369468678,0.658239399653922,0.164167464079095,0.243206428637567,0.146199987425332,0.219550115291051,0.134206418760372,0.841159794256509,1.3377599609307,1.65209391491899,1.32225283331772,0.426576501070468,0.928946687441754,0.644337306610467,0.605050573870028,0.22237804384487,0.190225626112559,0,0.329397909448022,0.251335208800269,0.596869416123452,0.19496408711912,0,0.432276099749388,0.597423819763102,2.0863469104839,1.37098215131675,3.38123207019241,0.407302655690628,0.775809948670503,0.911765658574141,0.316182685621286,0.295220295959204,0.470996183524124,0.246794327843601,0.889357881261447,0.667380422864376,0.589676985339609,0.674586337154561,0,0.241177159752417,0,0.863088412352432,0.810676133875177,0.274561413188081,1.43768206527355,0.372140947668503,0,3.03094653536534,1.97337154874103,0.964887042726734,1.10851914099963,0.37898282354097,0.325929952884052,0.509235257325564,1.17345124144251,0.335012514883631,0.714130922658041,0.585400943573396,0.315270288212382,0,0.637819074629948,0.327726629431476,0.345369963731791,0.433947175744535,0,0.54390568381871,0,0.275936746304732,0.80275294993896,0.937693492737625,0,1.00988370881749,0.315508219416257,1.17131623288992,0.646270193198397,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.584511715822624,0.790575555893047,0,0.283880170416537,0.178065603667255,0.651547837414304,0.989820737835213,0,0.485561272309963,0.604647113929502,0,0.295301892880773,0.307435147943927,1.03371317267288,0,0,0.948110273807448,0,0,0.340439605753788,0.18006109403131,0.388076051348264,0.428674070063185,0.886701168211368,0.356737635204141,0.822745103010605,1.2178597964584,0.938686832254841,1.0591603543191,0.220528398054962,0.65954501176592,0.16146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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:71890 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2A7G8,uniprot:Q9D752 | |||
|association_with_transcript=21bp_to_NM_027985,uc008vuc.1_5end | |||
|cluster_id=chr4:147514620..147514661,+ | |||
|description=CAGE_peak_5_at_Mad2l2_5end | |||
|id=chr4:147514620..147514661,+ | |||
|ontology_enrichment_celltype=CL:0000548!5.86e-08!115;CL:0000004!5.86e-08!115;CL:0000255!5.86e-08!115;CL:0000221!1.00e-07!44;CL:0000133!1.00e-07!44;CL:0002319!2.54e-07!43;CL:0000144!3.09e-07!121;CL:0000012!3.09e-07!121;CL:0002321!7.85e-07!70;CL:0000220!7.85e-07!70;CL:0002371!8.42e-07!118 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,9.84e-10,70;CL:0000221,2.35e-09,44;CL:0000133,2.35e-09,44;CL:0002319,9.87e-09,43;CL:0000117,5.12e-08,23;CL:0000337,5.12e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,5.85e-07,6;UBERON:0005174,5.85e-07,6;UBERON:0001137,5.85e-07,6 | |||
|phase1_expression=2.08193501236232,2.44282785347553,5.45999087267443,3.32710632437513,2.00358291978539,0.839396359559449,1.16806320297763,0,1.12630977721333,1.87251621057595,0.68487187290202,1.11681022593471,0.171200729931206,0.34968160967599,1.33243904726265,1.41732687172878,0,0.473193248037357,0,0.84877930359606,5.6128571499706,1.19149141441062,0.261199789138935,0.799962113967033,1.60586496747019,6.89078356938024,0.430761996159075,2.58565479223067,0.380046838912748,0.252030129759931,2.21730510655305,2.54012269383853,1.23012957516914,0,0,0.332469290716985,0.816677425049476,0,0,0,0,0,0,0,0.202753862439029,0,2.34717403304412,0.218025156380447,0.878744730937887,1.55543919259427,1.53985063787899,1.43752564364972,0.335565212115473,1.45072428402269,0,0.771778308107841,0.573066879877513,0,4.45096213891115,4.23192783417626,1.26766280701236,1.69422266034566,1.77858959222228,0.449949858640699,0,0,2.39680088414724,5.76327457982332,1.97010263386108,2.56511282830212,1.68259969081106,3.99911378165325,3.75476519617743,0.857435594504678,1.24599112323707,0,0,0.766124028511126,0.921639199537461,2.1101806036831,2.92760459527711,0.52091337055676,1.95428099300967,0,0.916789486660861,3.53554302568401,2.70506193518296,1.67759501242771,1.28734528666413,0.831287161174641,0.869593466105033,5.16254326188832,4.0798280022465,2.15881276655127,0,1.34408066129201,1.12355536105401,0.681721290312231,0.259786004602869,0.35333957451034,1.97180787687353,0,0,0,0.865964164044856,1.01343946190039,1.01104889002957,1.37020655662872,0,0.742210695324124,0.693941307064543,0.608930956624282,0.230615497256059,0.60289056221049,0,0.251333182659351,2.47194967734374,0.144599356919912,0.884610551949874,0.161766849947409,0.441683036920787,1.45462575940567,0,0.585561594023094,0.41889341362691,0.255457055208591,0.838705871541442,1.19980546198682,1.27070227073065,0.449371918214468,1.37250180845588,1.13088916901578,0.173824320192276,0.511430914660661,0.41557608911912,0.811206315338788,0.305518091550949,0.373220911830279,0.252722758433675,0,0.650602214813519,0.689706313300419,1.26043490863744,1.05493372485001,0.476255494059295,0,0.749613796477831,0,1.5089759505299,0.756424320671277,0.703804496655795,0.657587197282725,0.278047249225598,0.348252166522167,0.411564272815887,0.796137067273973,0,0.772043721344145,0.852490498186778,0.621377317606506,0.234526059981096,0,0.23674473558521,0,0.308534225774757,0.697601834251224,0,0.467061369468678,0.658239399653922,0.164167464079095,0.243206428637567,0.146199987425332,0.219550115291051,0.134206418760372,0.841159794256509,1.3377599609307,1.65209391491899,1.32225283331772,0.426576501070468,0.928946687441754,0.644337306610467,0.605050573870028,0.22237804384487,0.190225626112559,0,0.329397909448022,0.251335208800269,0.596869416123452,0.19496408711912,0,0.432276099749388,0.597423819763102,2.0863469104839,1.37098215131675,3.38123207019241,0.407302655690628,0.775809948670503,0.911765658574141,0.316182685621286,0.295220295959204,0.470996183524124,0.246794327843601,0.889357881261447,0.667380422864376,0.589676985339609,0.674586337154561,0,0.241177159752417,0,0.863088412352432,0.810676133875177,0.274561413188081,1.43768206527355,0.372140947668503,0,3.03094653536534,1.97337154874103,0.964887042726734,1.10851914099963,0.37898282354097,0.325929952884052,0.509235257325564,1.17345124144251,0.335012514883631,0.714130922658041,0.585400943573396,0.315270288212382,0,0.637819074629948,0.327726629431476,0.345369963731791,0.433947175744535,0,0.54390568381871,0,0.275936746304732,0.80275294993896,0.937693492737625,0,1.00988370881749,0.315508219416257,1.17131623288992,0.646270193198397,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.584511715822624,0.790575555893047,0,0.283880170416537,0.178065603667255,0.651547837414304,0.989820737835213,0,0.485561272309963,0.604647113929502,0,0.295301892880773,0.307435147943927,1.03371317267288,0,0,0.948110273807448,0,0,0.340439605753788,0.18006109403131,0.388076051348264,0.428674070063185,0.886701168211368,0.356737635204141,0.822745103010605,1.2178597964584,0.938686832254841,1.0591603543191,0.220528398054962,0.65954501176592,0.161464426695906,1.56813604813205,1.07435109602823,1.14898629821543,0,1.29797711407357,0.512612642393558,0.412773735926445,0,0.941842285023455,0.27338845544205,0.228778173206523,0.679913719975421,0.979660166265606,0.967399816630967,0.954670618015114,0.632671987162271,0.203319467126849,0.216010681643603,0,0,0.404593039154462,0.165306911450672,0,0.259229946583586,0.621339313086926,31.5668045663147,0.598066184175915,0,0.388902376688095,0.258319646955462,0.337912250981556,0.58678619322877,0.5208175393758,1.8874681996628,18.8435614244285,15.2655903316669,0,0.202725215290164,0.616265742988964,0.909445760844565,0.537080087002444,0.596044064343795,0.721172697119813,1.03382669022204,0,0.304827226619999,0.201652370273681,0.194915761479505,0.288635524920988,0.350630706544707,0,3.55177525398503,2.24284641523689,1.67884616364078,0,0.187682475451182,0.36630324853453,0.21436837907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| |||
|short_description=p5@Mad2l2 | |||
}} |
Revision as of 04:08, 5 August 2015
Short description: | p5@Mad2l2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Mad2l2_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 21bp_to_NM_027985, uc008vuc.1_5end |
EntrezGene: | 71890 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 9.84e-10 | 70 |
ectodermal cell | 2.35e-09 | 44 |
neurectodermal cell | 2.35e-09 | 44 |
neural cell | 9.87e-09 | 43 |
CNS neuron (sensu Vertebrata) | 5.12e-08 | 23 |
neuroblast (sensu Vertebrata) | 5.12e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 5.85e-07 | 6 |
dorsal region element | 5.85e-07 | 6 |
dorsum | 5.85e-07 | 6 |