FFCP PHASE1:Mm9::chr4:147375200..147375220,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=342|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:147375200..147375220,+|id=chr4:147375200..147375220,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002494,1.53e-07,3;CL:0000737,1.53e-07,3;CL:0000746,1.53e-07,3;CL:0000513,1.53e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!6.26e-33!18;UBERON:0000948!6.26e-33!18;UBERON:0005498!6.26e-33!18;UBERON:0004140!6.26e-33!18;UBERON:0009881!6.26e-33!18;UBERON:0004141!6.26e-33!18;UBERON:0003084!6.26e-33!18;UBERON:0007005!6.26e-33!18;UBERON:0004139!6.26e-33!18;UBERON:0004291!6.26e-33!18;UBERON:0004535!1.01e-24!23;UBERON:0001009!1.01e-24!23;UBERON:0004872!9.99e-18!33;UBERON:0003103!1.57e-12!43;UBERON:0003914!5.96e-11!47;UBERON:0002048!2.65e-09!14;UBERON:0000117!2.65e-09!14;UBERON:0000171!2.65e-09!14;UBERON:0000170!2.65e-09!14;UBERON:0005597!2.65e-09!14;UBERON:0000118!2.65e-09!14;UBERON:0000310!5.01e-08!6;UBERON:0001443!5.01e-08!6;UBERON:0005153!2.28e-07!17;UBERON:0005178!2.28e-07!17;UBERON:0005181!2.28e-07!17;UBERON:0002224!2.28e-07!17;UBERON:0000915!2.28e-07!17;UBERON:0008947!2.28e-07!17;UBERON:0003258!2.28e-07!17;UBERON:0000025!7.12e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.14e-77,18;UBERON:0000948,2.14e-77,18;UBERON:0005498,2.14e-77,18;UBERON:0004140,2.14e-77,18;UBERON:0009881,2.14e-77,18;UBERON:0004141,2.14e-77,18;UBERON:0003084,2.14e-77,18;UBERON:0007005,2.14e-77,18;UBERON:0004139,2.14e-77,18;UBERON:0004291,2.14e-77,18;UBERON:0004535,3.77e-60,23;UBERON:0001009,3.77e-60,23;UBERON:0004872,2.58e-41,33;UBERON:0003103,3.21e-31,43;UBERON:0003914,2.21e-28,47;UBERON:0003081,3.26e-16,87;UBERON:0010314,2.15e-13,92;UBERON:0000926,4.23e-11,120;UBERON:0004120,4.23e-11,120;UBERON:0006603,4.23e-11,120;UBERON:0000025,2.39e-10,114;UBERON:0001048,1.10e-09,134;UBERON:0004111,1.65e-09,122;UBERON:0000483,7.18e-07,174;UBERON:0000119,9.21e-07,176|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14613375975503,31.9716697212014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10688658803253,5.15957331958412,3.42117916775928,5.44512891845984,1.37734962223183,1.85120535464854,2.32533944750408,4.29237442239391,3.26942958628075,1.97471819896177,1.64167464079095,3.40489000092594,3.94739966048397,3.73235195994786,9.5286557319864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407302655690628,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.757965647081939,0.488894929326078,0.509235257325564,0,0.335012514883631,0,0.390267295715598,0,0,0.159454768657487,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25984164595559,0,1.19208812868759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0,0.0846146078916765,0,0,0,0.561142271657738,0.118635018124174,0,0,0,0.385813221962283,0,0,0.214871054048298,0,0,0|short_description=p@chr4:147375200..147375220,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=342 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:147375200..147375220,+ | |||
|description=CAGE_peak_at_chr4:147375200..147375220,+ | |||
|id=chr4:147375200..147375220,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,1.53e-07,3;CL:0000737,1.53e-07,3;CL:0000746,1.53e-07,3;CL:0000513,1.53e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!6.26e-33!18;UBERON:0000948!6.26e-33!18;UBERON:0005498!6.26e-33!18;UBERON:0004140!6.26e-33!18;UBERON:0009881!6.26e-33!18;UBERON:0004141!6.26e-33!18;UBERON:0003084!6.26e-33!18;UBERON:0007005!6.26e-33!18;UBERON:0004139!6.26e-33!18;UBERON:0004291!6.26e-33!18;UBERON:0004535!1.01e-24!23;UBERON:0001009!1.01e-24!23;UBERON:0004872!9.99e-18!33;UBERON:0003103!1.57e-12!43;UBERON:0003914!5.96e-11!47;UBERON:0002048!2.65e-09!14;UBERON:0000117!2.65e-09!14;UBERON:0000171!2.65e-09!14;UBERON:0000170!2.65e-09!14;UBERON:0005597!2.65e-09!14;UBERON:0000118!2.65e-09!14;UBERON:0000310!5.01e-08!6;UBERON:0001443!5.01e-08!6;UBERON:0005153!2.28e-07!17;UBERON:0005178!2.28e-07!17;UBERON:0005181!2.28e-07!17;UBERON:0002224!2.28e-07!17;UBERON:0000915!2.28e-07!17;UBERON:0008947!2.28e-07!17;UBERON:0003258!2.28e-07!17;UBERON:0000025!7.12e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.14e-77,18;UBERON:0000948,2.14e-77,18;UBERON:0005498,2.14e-77,18;UBERON:0004140,2.14e-77,18;UBERON:0009881,2.14e-77,18;UBERON:0004141,2.14e-77,18;UBERON:0003084,2.14e-77,18;UBERON:0007005,2.14e-77,18;UBERON:0004139,2.14e-77,18;UBERON:0004291,2.14e-77,18;UBERON:0004535,3.77e-60,23;UBERON:0001009,3.77e-60,23;UBERON:0004872,2.58e-41,33;UBERON:0003103,3.21e-31,43;UBERON:0003914,2.21e-28,47;UBERON:0003081,3.26e-16,87;UBERON:0010314,2.15e-13,92;UBERON:0000926,4.23e-11,120;UBERON:0004120,4.23e-11,120;UBERON:0006603,4.23e-11,120;UBERON:0000025,2.39e-10,114;UBERON:0001048,1.10e-09,134;UBERON:0004111,1.65e-09,122;UBERON:0000483,7.18e-07,174;UBERON:0000119,9.21e-07,176 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14613375975503,31.9716697212014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10688658803253,5.15957331958412,3.42117916775928,5.44512891845984,1.37734962223183,1.85120535464854,2.32533944750408,4.29237442239391,3.26942958628075,1.97471819896177,1.64167464079095,3.40489000092594,3.94739966048397,3.73235195994786,9.5286557319864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407302655690628,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.757965647081939,0.488894929326078,0.509235257325564,0,0.335012514883631,0,0.390267295715598,0,0,0.159454768657487,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25984164595559,0,1.19208812868759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0,0.0846146078916765,0,0,0,0.561142271657738,0.118635018124174,0,0,0,0.385813221962283,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr4:147375200..147375220,+ | |||
}} |
Latest revision as of 04:02, 5 August 2015
Short description: | p@chr4:147375200..147375220, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:147375200..147375220, + |
Coexpression cluster: | MCL_coexpression_mm9:342 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 1.53e-07 | 3 |
striated muscle cell | 1.53e-07 | 3 |
cardiac muscle cell | 1.53e-07 | 3 |
cardiac muscle myoblast | 1.53e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 2.14e-77 | 18 |
heart | 2.14e-77 | 18 |
primitive heart tube | 2.14e-77 | 18 |
primary heart field | 2.14e-77 | 18 |
anterior lateral plate mesoderm | 2.14e-77 | 18 |
heart tube | 2.14e-77 | 18 |
heart primordium | 2.14e-77 | 18 |
cardiac mesoderm | 2.14e-77 | 18 |
cardiogenic plate | 2.14e-77 | 18 |
heart rudiment | 2.14e-77 | 18 |
cardiovascular system | 3.77e-60 | 23 |
circulatory system | 3.77e-60 | 23 |
splanchnic layer of lateral plate mesoderm | 2.58e-41 | 33 |
compound organ | 3.21e-31 | 43 |
epithelial tube | 2.21e-28 | 47 |
lateral plate mesoderm | 3.26e-16 | 87 |
structure with developmental contribution from neural crest | 2.15e-13 | 92 |
mesoderm | 4.23e-11 | 120 |
mesoderm-derived structure | 4.23e-11 | 120 |
presumptive mesoderm | 4.23e-11 | 120 |
tube | 2.39e-10 | 114 |
primordium | 1.10e-09 | 134 |
anatomical conduit | 1.65e-09 | 122 |
epithelium | 7.18e-07 | 174 |
cell layer | 9.21e-07 | 176 |