FFCP PHASE1:Mm9::chr6:124706717..124706786,-: Difference between revisions
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{{FFCP|EntrezGene=13498|HGNC=|MCL_coexpression_id=1354|UniProt=O35126|association_with_transcript=-175bp_to_ENSMUST00000088357_5end|description=CAGE_peak_1_at_Atn1_5end|id=chr6:124706717..124706786,-|ontology_enrichment_celltype=CL:0000117!2.64e-10!23;CL:0000337!2.64e-10!23;CL:0000221!1.14e-09!44;CL:0000133!1.14e-09!44;CL:0002319!2.62e-09!43;CL:0000055!2.72e-09!50;CL:0000393!2.53e-07!39;CL:0000211!2.53e-07!39;CL:0002321!2.60e-07!70;CL:0000220!2.60e-07!70;CL:0000540!8.77e-07!33;CL:0000047!8.77e-07!33;CL:0000031!8.77e-07!33;CL:0000404!8.77e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,2.64e-10,23;CL:0000337,2.64e-10,23;CL:0000221,1.14e-09,44;CL:0000133,1.14e-09,44;CL:0002319,2.62e-09,43;CL:0000393,2.53e-07,39;CL:0000211,2.53e-07,39;CL:0002321,2.60e-07,70;CL:0000540,8.77e-07,33;CL:0000047,8.77e-07,33;CL:0000031,8.77e-07,33;CL:0000404,8.77e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!8.17e-21!73;UBERON:0005743!8.17e-21!73;UBERON:0000073!1.01e-20!75;UBERON:0001016!1.01e-20!75;UBERON:0001049!3.30e-19!52;UBERON:0005068!3.30e-19!52;UBERON:0006241!3.30e-19!52;UBERON:0007135!3.30e-19!52;UBERON:0004121!1.10e-18!102;UBERON:0000924!1.10e-18!102;UBERON:0006601!1.10e-18!102;UBERON:0000955!3.48e-18!50;UBERON:0006238!3.48e-18!50;UBERON:0000033!3.61e-18!63;UBERON:0002616!9.83e-18!49;UBERON:0002020!1.03e-14!34;UBERON:0002346!1.08e-14!71;UBERON:0003075!1.08e-14!71;UBERON:0007284!1.08e-14!71;UBERON:0003080!6.51e-14!40;UBERON:0002780!2.07e-13!39;UBERON:0001890!2.07e-13!39;UBERON:0006240!2.07e-13!39;UBERON:0003056!5.54e-13!49;UBERON:0002791!1.96e-12!29;UBERON:0003528!1.96e-12!29;UBERON:0001893!1.96e-12!29;UBERON:0000956!5.14e-10!21;UBERON:0001869!5.14e-10!21;UBERON:0000203!5.14e-10!21;UBERON:0002619!1.32e-08!17;UBERON:0004111!4.06e-08!122;UBERON:0000468!1.29e-07!333;UBERON:0000153!1.55e-07!94;UBERON:0007811!3.10e-07!86;UBERON:0000025!4.64e-07!114;UBERON:0002021!5.97e-07!10;UBERON:0000411!5.97e-07!10;UBERON:0001950!5.97e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.17e-21,73;UBERON:0001016,1.01e-20,75;UBERON:0004121,2.51e-20,95;UBERON:0000924,2.51e-20,95;UBERON:0006601,2.51e-20,95;UBERON:0000073,3.51e-20,54;UBERON:0001049,3.30e-19,52;UBERON:0005068,3.30e-19,52;UBERON:0006241,3.30e-19,52;UBERON:0007135,3.30e-19,52;UBERON:0010371,5.47e-17,73;UBERON:0000955,1.01e-16,47;UBERON:0006238,1.01e-16,47;UBERON:0002346,1.17e-16,64;UBERON:0003075,1.17e-16,64;UBERON:0007284,1.17e-16,64;UBERON:0002616,2.81e-16,46;UBERON:0002020,1.03e-14,34;UBERON:0003080,6.51e-14,40;UBERON:0010314,7.37e-14,92;UBERON:0002780,2.07e-13,39;UBERON:0001890,2.07e-13,39;UBERON:0006240,2.07e-13,39;UBERON:0003056,5.54e-13,49;UBERON:0003528,1.96e-12,29;UBERON:0002791,1.96e-12,29;UBERON:0001893,1.96e-12,29;UBERON:0000956,5.14e-10,21;UBERON:0001869,5.14e-10,21;UBERON:0000203,5.14e-10,21;UBERON:0002619,1.32e-08,17;UBERON:0004111,4.06e-08,122;UBERON:0000025,4.64e-07,114;UBERON:0002021,5.97e-07,10;UBERON:0000411,5.97e-07,10;UBERON:0001950,5.97e-07,10|phase1_expression=28.0260482433389,34.1995899486574,33.2149444754361,42.0425253716494,62.1110705133471,19.1382369979554,17.0537227634734,7.36002943616985,7.46180227403834,6.78787126333781,1.54096171402954,2.6324812468461,12.1552518251156,17.0469784717045,2.33176833270964,1.61980213911861,0.699561878128147,2.36596624018678,2.4680598049033,3.39511721438424,10.2902381082794,5.16312946244604,4.17919662622297,9.11956809922418,10.3234176480227,25.2662064210609,15.5074318617267,14.2211013572687,14.251756459228,18.6502296022349,9.3126814475228,12.065582795733,7.38077745101484,0,9.82095507154334,5.31950865147176,10.2084678131185,10.8818223991596,4.6880120671428,9.42342739152837,9.99993529652724,13.6609096991689,7.76816564849846,19.0104195143122,19.4643707941468,16.3356609423897,53.2026114156667,25.9449936092731,28.9985761209503,27.414615769474,20.7179904005537,47.4383462404406,1.17447824240415,10.1550699881588,8.06625117941913,30.8711323243136,32.6648121530183,33.0030139057563,44.5096213891115,34.9134046319542,42.466704034914,25.0744953731158,18.6751907183339,20.6976934974722,11.8663963508037,19.8934432184908,28.16241038873,38.806048837477,27.788816098672,28.6212589263184,27.552569937031,34.2781181284564,26.0624878322904,25.9680494335703,24.344749638632,32.1726575313507,29.731287869835,38.8169507778971,33.0254046500923,46.4239732810282,38.3333226694096,38.0266760506435,35.177057874174,21.3849791812038,28.8788688298171,38.3017161115768,37.7284954117623,34.11109858603,19.0830007199624,23.1248973926764,15.6526823898906,9.46466264679525,3.39985666853875,5.93673510801599,4.54843492213368,10.7526452903361,9.40977614882737,20.4516387093669,15.3273742715693,21.2003744706204,30.7038655113164,29.5150898052931,91.7298862943925,149.3240076622,7.79367747640371,8.86759529162845,7.58286667522175,8.10705546005326,7.25026074212081,25.6804900582147,12.3174582003956,12.7875500891099,15.912469310668,16.1273225391306,21.518733405834,16.5879900555172,14.0901131608593,19.0871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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13498 | |||
|HGNC= | |||
|MCL_coexpression_id=1354 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O35126 | |||
|association_with_transcript=-175bp_to_ENSMUST00000088357_5end | |||
|cluster_id=chr6:124706717..124706786,- | |||
|description=CAGE_peak_1_at_Atn1_5end | |||
|id=chr6:124706717..124706786,- | |||
|ontology_enrichment_celltype=CL:0000117!2.64e-10!23;CL:0000337!2.64e-10!23;CL:0000221!1.14e-09!44;CL:0000133!1.14e-09!44;CL:0002319!2.62e-09!43;CL:0000055!2.72e-09!50;CL:0000393!2.53e-07!39;CL:0000211!2.53e-07!39;CL:0002321!2.60e-07!70;CL:0000220!2.60e-07!70;CL:0000540!8.77e-07!33;CL:0000047!8.77e-07!33;CL:0000031!8.77e-07!33;CL:0000404!8.77e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.64e-10,23;CL:0000337,2.64e-10,23;CL:0000221,1.14e-09,44;CL:0000133,1.14e-09,44;CL:0002319,2.62e-09,43;CL:0000393,2.53e-07,39;CL:0000211,2.53e-07,39;CL:0002321,2.60e-07,70;CL:0000540,8.77e-07,33;CL:0000047,8.77e-07,33;CL:0000031,8.77e-07,33;CL:0000404,8.77e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.17e-21!73;UBERON:0005743!8.17e-21!73;UBERON:0000073!1.01e-20!75;UBERON:0001016!1.01e-20!75;UBERON:0001049!3.30e-19!52;UBERON:0005068!3.30e-19!52;UBERON:0006241!3.30e-19!52;UBERON:0007135!3.30e-19!52;UBERON:0004121!1.10e-18!102;UBERON:0000924!1.10e-18!102;UBERON:0006601!1.10e-18!102;UBERON:0000955!3.48e-18!50;UBERON:0006238!3.48e-18!50;UBERON:0000033!3.61e-18!63;UBERON:0002616!9.83e-18!49;UBERON:0002020!1.03e-14!34;UBERON:0002346!1.08e-14!71;UBERON:0003075!1.08e-14!71;UBERON:0007284!1.08e-14!71;UBERON:0003080!6.51e-14!40;UBERON:0002780!2.07e-13!39;UBERON:0001890!2.07e-13!39;UBERON:0006240!2.07e-13!39;UBERON:0003056!5.54e-13!49;UBERON:0002791!1.96e-12!29;UBERON:0003528!1.96e-12!29;UBERON:0001893!1.96e-12!29;UBERON:0000956!5.14e-10!21;UBERON:0001869!5.14e-10!21;UBERON:0000203!5.14e-10!21;UBERON:0002619!1.32e-08!17;UBERON:0004111!4.06e-08!122;UBERON:0000468!1.29e-07!333;UBERON:0000153!1.55e-07!94;UBERON:0007811!3.10e-07!86;UBERON:0000025!4.64e-07!114;UBERON:0002021!5.97e-07!10;UBERON:0000411!5.97e-07!10;UBERON:0001950!5.97e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.17e-21,73;UBERON:0001016,1.01e-20,75;UBERON:0004121,2.51e-20,95;UBERON:0000924,2.51e-20,95;UBERON:0006601,2.51e-20,95;UBERON:0000073,3.51e-20,54;UBERON:0001049,3.30e-19,52;UBERON:0005068,3.30e-19,52;UBERON:0006241,3.30e-19,52;UBERON:0007135,3.30e-19,52;UBERON:0010371,5.47e-17,73;UBERON:0000955,1.01e-16,47;UBERON:0006238,1.01e-16,47;UBERON:0002346,1.17e-16,64;UBERON:0003075,1.17e-16,64;UBERON:0007284,1.17e-16,64;UBERON:0002616,2.81e-16,46;UBERON:0002020,1.03e-14,34;UBERON:0003080,6.51e-14,40;UBERON:0010314,7.37e-14,92;UBERON:0002780,2.07e-13,39;UBERON:0001890,2.07e-13,39;UBERON:0006240,2.07e-13,39;UBERON:0003056,5.54e-13,49;UBERON:0003528,1.96e-12,29;UBERON:0002791,1.96e-12,29;UBERON:0001893,1.96e-12,29;UBERON:0000956,5.14e-10,21;UBERON:0001869,5.14e-10,21;UBERON:0000203,5.14e-10,21;UBERON:0002619,1.32e-08,17;UBERON:0004111,4.06e-08,122;UBERON:0000025,4.64e-07,114;UBERON:0002021,5.97e-07,10;UBERON:0000411,5.97e-07,10;UBERON:0001950,5.97e-07,10 | |||
|phase1_expression=28.0260482433389,34.1995899486574,33.2149444754361,42.0425253716494,62.1110705133471,19.1382369979554,17.0537227634734,7.36002943616985,7.46180227403834,6.78787126333781,1.54096171402954,2.6324812468461,12.1552518251156,17.0469784717045,2.33176833270964,1.61980213911861,0.699561878128147,2.36596624018678,2.4680598049033,3.39511721438424,10.2902381082794,5.16312946244604,4.17919662622297,9.11956809922418,10.3234176480227,25.2662064210609,15.5074318617267,14.2211013572687,14.251756459228,18.6502296022349,9.3126814475228,12.065582795733,7.38077745101484,0,9.82095507154334,5.31950865147176,10.2084678131185,10.8818223991596,4.6880120671428,9.42342739152837,9.99993529652724,13.6609096991689,7.76816564849846,19.0104195143122,19.4643707941468,16.3356609423897,53.2026114156667,25.9449936092731,28.9985761209503,27.414615769474,20.7179904005537,47.4383462404406,1.17447824240415,10.1550699881588,8.06625117941913,30.8711323243136,32.6648121530183,33.0030139057563,44.5096213891115,34.9134046319542,42.466704034914,25.0744953731158,18.6751907183339,20.6976934974722,11.8663963508037,19.8934432184908,28.16241038873,38.806048837477,27.788816098672,28.6212589263184,27.552569937031,34.2781181284564,26.0624878322904,25.9680494335703,24.344749638632,32.1726575313507,29.731287869835,38.8169507778971,33.0254046500923,46.4239732810282,38.3333226694096,38.0266760506435,35.177057874174,21.3849791812038,28.8788688298171,38.3017161115768,37.7284954117623,34.11109858603,19.0830007199624,23.1248973926764,15.6526823898906,9.46466264679525,3.39985666853875,5.93673510801599,4.54843492213368,10.7526452903361,9.40977614882737,20.4516387093669,15.3273742715693,21.2003744706204,30.7038655113164,29.5150898052931,91.7298862943925,149.3240076622,7.79367747640371,8.86759529162845,7.58286667522175,8.10705546005326,7.25026074212081,25.6804900582147,12.3174582003956,12.7875500891099,15.912469310668,16.1273225391306,21.518733405834,16.5879900555172,14.0901131608593,19.0871151134283,9.73071607144862,19.5737888436365,10.6003928860989,8.727754556434,41.0061874679869,40.9893115816166,33.5114730901528,25.8011625760677,4.31334448221313,0.599902730993408,1.77898317902291,35.2008002601333,20.5875271268382,25.8847965352501,46.0634448509533,37.3344567702283,24.5189892580281,29.5279098783319,36.9676890776648,15.9240922380919,15.4160882644542,45.2449990155919,18.0867415718158,12.8745178482745,12.6043490863744,17.1803492332715,27.2826361596825,26.2633126583942,23.9876414872906,20.1788629176432,19.4011193639558,25.7184269028234,22.5217438929855,33.5369470614189,20.8535436919198,26.4671646556847,16.6683530490434,25.2773518859486,2.1066395619397,3.08817488537658,3.40996199274711,15.9486844852336,18.0585066185444,11.884096056427,18.2293446400612,13.5767319905709,15.5809784016252,16.0448421877781,22.534965717568,18.3321587516456,19.4180622897907,15.7600765515931,28.9415650078705,22.8071980383518,15.3685080703735,17.7152472763691,28.3891430561572,31.7975252251989,20.4859645449955,17.1892868331304,17.9162130449597,20.669063795579,18.6857818917035,19.9666689377109,14.4545728499166,15.978952593455,13.2868137232463,15.152303834609,19.8554814952213,30.4403402222961,23.0057622800562,31.4586793028978,15.561939590978,18.1218558661474,25.2258308267599,15.994791765362,24.7957018480777,20.3651327845314,21.5287260756065,25.8801175395276,25.6107975353242,24.0604541206752,13.3448918665169,19.2499575718009,11.5616524563988,9.00963570866908,8.84515478009414,4.04751802292737,5.27436315610108,6.75296047306767,5.85639459097266,11.7955416354832,13.781494275878,5.76578967694971,14.3768206527355,18.2349064357567,12.793544597697,8.84026072814891,10.4050499842709,11.5786445127208,14.7802552133284,15.1593129416388,21.6743418667894,20.1996652072474,21.1221223459652,24.9584323588305,34.754371569358,30.2457154179588,28.5319610832206,33.8840975162626,38.1096897091394,15.7308782127108,16.4050732772601,20.2508682014116,6.03165135757089,13.5976420954677,18.6870423747234,16.2802680319792,24.5642402681322,27.4275346625755,23.4426971888646,18.6828486131236,11.3582958989852,15.2271110275689,17.4492952163567,13.3822526853429,19.3834846451683,18.9661275628518,16.5972387686707,16.6585839009448,16.2067988958075,32.4534529586025,24.839514911447,30.4492182271006,42.6763833506369,25.2404288147979,31.8588332015911,14.3240575331439,12.9999129494843,16.0314317792513,15.3556984298002,13.5271465095328,20.1574068671212,14.1778154496227,17.4683715408513,25.9150141507369,20.0295356292498,15.470331487228,24.1712120085189,20.1668425315067,28.8469864835543,21.8623775732224,23.0542303734956,23.1879462882692,22.7077648430927,27.7063103694285,16.4270195644597,12.921756322693,26.6839361646504,23.7436204235731,20.6674466170759,26.7789386681012,18.5027133204862,21.1741760671129,19.2377352175701,35.0453820799863,6.4930934703184,23.5281029478074,13.1488114432495,5.83942216714542,4.64760374251486,4.11800711771741,9.5187920796559,7.97723278244851,8.29199842826543,27.6854479224383,28.6284074190927,21.3485440483191,18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| |||
|short_description=p1@Atn1 | |||
}} |
Revision as of 03:14, 5 August 2015
Short description: | p1@Atn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Atn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1354 |
Association with transcript: | -175bp_to_ENSMUST00000088357_5end |
EntrezGene: | 13498 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.64e-10 | 23 |
neuroblast (sensu Vertebrata) | 2.64e-10 | 23 |
ectodermal cell | 1.14e-09 | 44 |
neurectodermal cell | 1.14e-09 | 44 |
neural cell | 2.62e-09 | 43 |
electrically responsive cell | 2.53e-07 | 39 |
electrically active cell | 2.53e-07 | 39 |
embryonic cell | 2.60e-07 | 70 |
neuron | 8.77e-07 | 33 |
neuronal stem cell | 8.77e-07 | 33 |
neuroblast | 8.77e-07 | 33 |
electrically signaling cell | 8.77e-07 | 33 |