FFCP PHASE1:Mm9::chr4:142984313..142984319,+: Difference between revisions
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{{FFCP|EntrezGene=83491|HGNC=|MCL_coexpression_id=70|UniProt=Q99MW3|association_with_transcript=-11bp_to_ENSMUST00000037419_5end|description=CAGE_peak_1_at_Pramel1_5end|id=chr4:142984313..142984319,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004176!9.82e-38!17;UBERON:0009196!9.82e-38!17;UBERON:0009117!9.82e-38!17;UBERON:0000991!1.63e-35!18;UBERON:0005564!1.63e-35!18;UBERON:0003133!6.65e-35!24;UBERON:0005156!5.13e-32!26;UBERON:0000990!5.13e-32!26;UBERON:0000473!1.25e-27!14;UBERON:0003135!1.12e-25!15;UBERON:0003101!5.68e-24!16;UBERON:0000079!5.68e-24!16;UBERON:0002323!4.32e-16!37;UBERON:0004458!4.32e-16!37;UBERON:0003886!1.32e-15!38;UBERON:0002553!3.81e-15!39;UBERON:0000992!4.69e-12!3;UBERON:0003134!6.80e-12!8;UBERON:0000474!1.49e-10!9;UBERON:0000464!1.29e-09!57;UBERON:0001987!1.03e-08!2;UBERON:0003124!1.03e-08!2;UBERON:0004340!1.03e-08!2;UBERON:0003100!1.35e-08!11|ontology_enrichment_uberon_v019_2=UBERON:0004176,7.85e-30,17;UBERON:0009196,7.85e-30,17;UBERON:0009117,7.85e-30,17;UBERON:0000991,3.71e-28,18;UBERON:0005564,3.71e-28,18;UBERON:0000473,6.26e-28,14;UBERON:0003133,1.61e-26,24;UBERON:0003135,4.68e-26,15;UBERON:0005156,1.91e-24,26;UBERON:0000990,1.91e-24,26;UBERON:0003101,2.05e-24,16;UBERON:0000079,2.05e-24,16;UBERON:0002323,1.74e-13,37;UBERON:0004458,1.74e-13,37;UBERON:0003886,4.06e-13,38;UBERON:0002553,9.07e-13,39|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67738095830884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,2.13678724400706,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,1.69465656691056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.675103424736,1.19613236835183,0.66183396182839,0,0.645799117388655,0.844780627453891,1.64300134104056,10.1559420178281,24.8516646288935,29.4732627407727,25.3466405506922,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,1.10992976687032,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Pramel1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:83491 | |||
|HGNC= | |||
|MCL_coexpression_id=70 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q99MW3 | |||
|association_with_transcript=-11bp_to_ENSMUST00000037419_5end | |||
|cluster_id=chr4:142984313..142984319,+ | |||
|description=CAGE_peak_1_at_Pramel1_5end | |||
|id=chr4:142984313..142984319,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004176!9.82e-38!17;UBERON:0009196!9.82e-38!17;UBERON:0009117!9.82e-38!17;UBERON:0000991!1.63e-35!18;UBERON:0005564!1.63e-35!18;UBERON:0003133!6.65e-35!24;UBERON:0005156!5.13e-32!26;UBERON:0000990!5.13e-32!26;UBERON:0000473!1.25e-27!14;UBERON:0003135!1.12e-25!15;UBERON:0003101!5.68e-24!16;UBERON:0000079!5.68e-24!16;UBERON:0002323!4.32e-16!37;UBERON:0004458!4.32e-16!37;UBERON:0003886!1.32e-15!38;UBERON:0002553!3.81e-15!39;UBERON:0000992!4.69e-12!3;UBERON:0003134!6.80e-12!8;UBERON:0000474!1.49e-10!9;UBERON:0000464!1.29e-09!57;UBERON:0001987!1.03e-08!2;UBERON:0003124!1.03e-08!2;UBERON:0004340!1.03e-08!2;UBERON:0003100!1.35e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004176,7.85e-30,17;UBERON:0009196,7.85e-30,17;UBERON:0009117,7.85e-30,17;UBERON:0000991,3.71e-28,18;UBERON:0005564,3.71e-28,18;UBERON:0000473,6.26e-28,14;UBERON:0003133,1.61e-26,24;UBERON:0003135,4.68e-26,15;UBERON:0005156,1.91e-24,26;UBERON:0000990,1.91e-24,26;UBERON:0003101,2.05e-24,16;UBERON:0000079,2.05e-24,16;UBERON:0002323,1.74e-13,37;UBERON:0004458,1.74e-13,37;UBERON:0003886,4.06e-13,38;UBERON:0002553,9.07e-13,39 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67738095830884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,2.13678724400706,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,1.69465656691056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.675103424736,1.19613236835183,0.66183396182839,0,0.645799117388655,0.844780627453891,1.64300134104056,10.1559420178281,24.8516646288935,29.4732627407727,25.3466405506922,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,1.10992976687032,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Pramel1 | |||
}} |
Revision as of 03:09, 5 August 2015
Short description: | p1@Pramel1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pramel1_5end |
Coexpression cluster: | MCL_coexpression_mm9:70 |
Association with transcript: | -11bp_to_ENSMUST00000037419_5end |
EntrezGene: | 83491 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
external genitalia | 7.85e-30 | 17 |
indifferent external genitalia | 7.85e-30 | 17 |
indifferent gonad | 7.85e-30 | 17 |
gonad | 3.71e-28 | 18 |
gonad primordium | 3.71e-28 | 18 |
testis | 6.26e-28 | 14 |
reproductive organ | 1.61e-26 | 24 |
male reproductive organ | 4.68e-26 | 15 |
reproductive structure | 1.91e-24 | 26 |
reproductive system | 1.91e-24 | 26 |
male organism | 2.05e-24 | 16 |
male reproductive system | 2.05e-24 | 16 |
body cavity | 1.74e-13 | 37 |
body cavity or lining | 1.74e-13 | 37 |
body cavity precursor | 4.06e-13 | 38 |
anatomical cavity | 9.07e-13 | 39 |