FFCP PHASE1:Mm9::chr10:96957645..96957675,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=98|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:96957645..96957675,+|id=chr10:96957645..96957675,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000680,1.42e-11,6;CL:0000187,1.42e-11,6;CL:0000056,1.42e-11,6;CL:0000222,8.80e-10,7;CL:0000355,2.15e-07,9;CL:0000192,4.86e-07,3;CL:0000359,4.86e-07,3;CL:0002539,4.86e-07,3;CL:0000514,4.86e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!2.31e-07!193;UBERON:0004120!2.31e-07!193;UBERON:0006603!2.31e-07!193;UBERON:0004535!5.23e-07!23;UBERON:0001009!5.23e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0000383,7.07e-09,10;UBERON:0000947,5.45e-08,4;UBERON:0001637,5.45e-08,4;UBERON:0004573,5.45e-08,4;UBERON:0003509,5.45e-08,4;UBERON:0004571,5.45e-08,4;UBERON:0010191,5.45e-08,4;UBERON:0004572,5.45e-08,4;UBERON:0004872,1.41e-07,33;UBERON:0001134,2.15e-07,9;UBERON:0002036,2.15e-07,9;UBERON:0002385,2.15e-07,9;UBERON:0000486,2.15e-07,9;UBERON:0007503,2.15e-07,9;UBERON:0001015,2.15e-07,9;UBERON:0002329,2.15e-07,9;UBERON:0000474,2.15e-07,9;UBERON:0003082,2.15e-07,9;UBERON:0003059,2.15e-07,9;UBERON:0007282,2.15e-07,9;UBERON:0004290,2.15e-07,9;UBERON:0009618,2.15e-07,9;UBERON:0004535,2.73e-07,23;UBERON:0001009,2.73e-07,23;UBERON:0001135,4.86e-07,3;UBERON:0004237,4.86e-07,3;UBERON:0004695,4.86e-07,3;UBERON:0002111,4.86e-07,3;UBERON:0004178,4.86e-07,3|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.485308610996,13.584508783415,2.0190142737785,0,0,0,0,0,0,0,0,0,1.54355661621568,2.0057340795713,1.54701627683233,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0.131886287730194,0.0914876436024097,0,0,0,0.61119299110724,0.294628585473668,0.427115042397309,0,0.075726193333184,0.151143120213571,0,0.860423876981386,0,0,0,0.448026887097336,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,1.03575153458869,0.148442139064825,0.346970653532272,0.608930956624282,0,1.05505848386836,0.587943535678524,0.251333182659351,1.23597483867187,1.01219549843938,0,0.808834249737046,0.220841518460394,2.42437626567611,0,0,0.41889341362691,0,0,0,0,0,0,0,0,0,0,0,2.64782346010822,1.11966273549084,0.252722758433675,0.841767423545896,0.130120442962704,0.229902104433473,1.0803727788321,1.50704817835715,1.02054748726992,0.384341160854549,0.374806898238915,1.03481348295606,0,0,0,1.31517439456545,0.278047249225598,1.74126083261083,0.61734640922383,0.398068533636986,0,0,0,0,0.703578179943289,0.180062061461015,0.23674473558521,0.590292695242212,0.308534225774757,0.930135779001631,0.268273401399619,0.467061369468678,0.822799249567402,1.31333971263276,1.05389452409612,0.584799949701329,2.63460138349261,1.20785776884335,0.210289948564127,0,0,0.264450566663544,0.213288250535234,0.232236671860439,0.38660238396628,0.201683524623343,0.444756087689741,0.190225626112559,0.474529061544512,0.823494773620054,0.251335208800269,0.795825888164603,0.38992817423824,1.79763881730844,0.864552199498777,0.597423819763102,0.379335801906163,0.228497025219458,0,0.814605311381257,0.387904974335251,0.350679099451593,0.632365371242573,0,0.31399745568275,0.123397163921801,0.296452627087149,0.166845105716094,0.196558995113203,0,0.202860121388503,0.482354319504834,0,0,1.13494658742525,0.823684239564244,5.75072826109418,0,0.312037673114561,0,0.896987067609561,0,0.184753190166605,0.568474235311454,0.162964976442026,0.339490171550376,0,0.167506257441816,0,0.195133647857799,0.315270288212382,0.221464689648775,0,0.327726629431476,0.518054945597687,0.578596234326046,0,0,0.491764273019036,0,0,0.117211686592203,0.655739781506702,2.27223834483936,0,0,0,0,0,0,0,0,0,0,0.709700426041343,1.78065603667255,2.28041743095006,2.14461159864296,0,0.971122544619926,0.302323556964751,0,0.885905678642318,1.22974059177571,0.775284879504663,0.727067458955011,0.712994756769443,0,3.16255825724996,3.09406629744561,0,0.18006109403131,0,0,0.177340233642274,0.713475270408282,0.658196082408484,0.304464949114599,1.87737366450968,0.42366414172764,0.220528398054962,0.98931751764888,1.93757312035087,0.72375509913787,0.358117032009409,1.31312719796049,0.291480836629851,0.18542530201051,0,0.82554747185289,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0,0.756037385752609,1.25452977608681,1.09181281873089,0.944050424693745,1.1571483801547,1.30877970992015,0.90730481304255,0.621339313086926,0,0.149516546043979,0.496375471371293,1.94451188344048,0.904118764344118,1.01373675294467,1.29092962510329,0.651021924219751,0.524296722128554,0.241584120826006,0,0.316011120628178,0.202725215290164,0.616265742988964,0.25984164595559,0.358053391334963,0,0,0.295379054349154,0.201932899896295,0,0,0.0974578807397524,0.192423683280659,0.116876902181569,1.81384306892169,0,0,0,3.28422309854724,3.19060208267009,2.38097111547445,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.972426868273176,0,0.183843508450014,0.44449345560323,0.412070114477788,0.64183841918363,0.252697211763798,1.2673964994512,0.377252682772152,0.561849044819294,0.384150914429216,0.459483751644906,0,0.463537303779422,0.38581844092741,0,0.294397840268795,1.02860775715625,0.70990322463735,0.476872379894642,0.290692833264657,0.282328141245992,0.25384382367503,0,0.263069711437843,0.814824683075171,0,0.118635018124174,0.985044823755635,0.409231043169689,0.309873682371932,0.578719832943424,0.249810577937946,0.701794825336225,1.50409737833809,1.91288332068843,1.10295709559758,1.39120701372253|short_description=p@chr10:96957645..96957675,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=98 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:96957645..96957675,+ | |||
|description=CAGE_peak_at_chr10:96957645..96957675,+ | |||
|id=chr10:96957645..96957675,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.42e-11,6;CL:0000187,1.42e-11,6;CL:0000056,1.42e-11,6;CL:0000222,8.80e-10,7;CL:0000355,2.15e-07,9;CL:0000192,4.86e-07,3;CL:0000359,4.86e-07,3;CL:0002539,4.86e-07,3;CL:0000514,4.86e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!2.31e-07!193;UBERON:0004120!2.31e-07!193;UBERON:0006603!2.31e-07!193;UBERON:0004535!5.23e-07!23;UBERON:0001009!5.23e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000383,7.07e-09,10;UBERON:0000947,5.45e-08,4;UBERON:0001637,5.45e-08,4;UBERON:0004573,5.45e-08,4;UBERON:0003509,5.45e-08,4;UBERON:0004571,5.45e-08,4;UBERON:0010191,5.45e-08,4;UBERON:0004572,5.45e-08,4;UBERON:0004872,1.41e-07,33;UBERON:0001134,2.15e-07,9;UBERON:0002036,2.15e-07,9;UBERON:0002385,2.15e-07,9;UBERON:0000486,2.15e-07,9;UBERON:0007503,2.15e-07,9;UBERON:0001015,2.15e-07,9;UBERON:0002329,2.15e-07,9;UBERON:0000474,2.15e-07,9;UBERON:0003082,2.15e-07,9;UBERON:0003059,2.15e-07,9;UBERON:0007282,2.15e-07,9;UBERON:0004290,2.15e-07,9;UBERON:0009618,2.15e-07,9;UBERON:0004535,2.73e-07,23;UBERON:0001009,2.73e-07,23;UBERON:0001135,4.86e-07,3;UBERON:0004237,4.86e-07,3;UBERON:0004695,4.86e-07,3;UBERON:0002111,4.86e-07,3;UBERON:0004178,4.86e-07,3 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.485308610996,13.584508783415,2.0190142737785,0,0,0,0,0,0,0,0,0,1.54355661621568,2.0057340795713,1.54701627683233,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0.131886287730194,0.0914876436024097,0,0,0,0.61119299110724,0.294628585473668,0.427115042397309,0,0.075726193333184,0.151143120213571,0,0.860423876981386,0,0,0,0.448026887097336,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,1.03575153458869,0.148442139064825,0.346970653532272,0.608930956624282,0,1.05505848386836,0.587943535678524,0.251333182659351,1.23597483867187,1.01219549843938,0,0.808834249737046,0.220841518460394,2.42437626567611,0,0,0.41889341362691,0,0,0,0,0,0,0,0,0,0,0,2.64782346010822,1.11966273549084,0.252722758433675,0.841767423545896,0.130120442962704,0.229902104433473,1.0803727788321,1.50704817835715,1.02054748726992,0.384341160854549,0.374806898238915,1.03481348295606,0,0,0,1.31517439456545,0.278047249225598,1.74126083261083,0.61734640922383,0.398068533636986,0,0,0,0,0.703578179943289,0.180062061461015,0.23674473558521,0.590292695242212,0.308534225774757,0.930135779001631,0.268273401399619,0.467061369468678,0.822799249567402,1.31333971263276,1.05389452409612,0.584799949701329,2.63460138349261,1.20785776884335,0.210289948564127,0,0,0.264450566663544,0.213288250535234,0.232236671860439,0.38660238396628,0.201683524623343,0.444756087689741,0.190225626112559,0.474529061544512,0.823494773620054,0.251335208800269,0.795825888164603,0.38992817423824,1.79763881730844,0.864552199498777,0.597423819763102,0.379335801906163,0.228497025219458,0,0.814605311381257,0.387904974335251,0.350679099451593,0.632365371242573,0,0.31399745568275,0.123397163921801,0.296452627087149,0.166845105716094,0.196558995113203,0,0.202860121388503,0.482354319504834,0,0,1.13494658742525,0.823684239564244,5.75072826109418,0,0.312037673114561,0,0.896987067609561,0,0.184753190166605,0.568474235311454,0.162964976442026,0.339490171550376,0,0.167506257441816,0,0.195133647857799,0.315270288212382,0.221464689648775,0,0.327726629431476,0.518054945597687,0.578596234326046,0,0,0.491764273019036,0,0,0.117211686592203,0.655739781506702,2.27223834483936,0,0,0,0,0,0,0,0,0,0,0.709700426041343,1.78065603667255,2.28041743095006,2.14461159864296,0,0.971122544619926,0.302323556964751,0,0.885905678642318,1.22974059177571,0.775284879504663,0.727067458955011,0.712994756769443,0,3.16255825724996,3.09406629744561,0,0.18006109403131,0,0,0.177340233642274,0.713475270408282,0.658196082408484,0.304464949114599,1.87737366450968,0.42366414172764,0.220528398054962,0.98931751764888,1.93757312035087,0.72375509913787,0.358117032009409,1.31312719796049,0.291480836629851,0.18542530201051,0,0.82554747185289,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0,0.756037385752609,1.25452977608681,1.09181281873089,0.944050424693745,1.1571483801547,1.30877970992015,0.90730481304255,0.621339313086926,0,0.149516546043979,0.496375471371293,1.94451188344048,0.904118764344118,1.01373675294467,1.29092962510329,0.651021924219751,0.524296722128554,0.241584120826006,0,0.316011120628178,0.202725215290164,0.616265742988964,0.25984164595559,0.358053391334963,0,0,0.295379054349154,0.201932899896295,0,0,0.0974578807397524,0.192423683280659,0.116876902181569,1.81384306892169,0,0,0,3.28422309854724,3.19060208267009,2.38097111547445,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.972426868273176,0,0.183843508450014,0.44449345560323,0.412070114477788,0.64183841918363,0.252697211763798,1.2673964994512,0.377252682772152,0.561849044819294,0.384150914429216,0.459483751644906,0,0.463537303779422,0.38581844092741,0,0.294397840268795,1.02860775715625,0.70990322463735,0.476872379894642,0.290692833264657,0.282328141245992,0.25384382367503,0,0.263069711437843,0.814824683075171,0,0.118635018124174,0.985044823755635,0.409231043169689,0.309873682371932,0.578719832943424,0.249810577937946,0.701794825336225,1.50409737833809,1.91288332068843,1.10295709559758,1.39120701372253 | |||
|short_description=p@chr10:96957645..96957675,+ | |||
}} |
Latest revision as of 02:17, 5 August 2015
Short description: | p@chr10:96957645..96957675, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:96957645..96957675, + |
Coexpression cluster: | MCL_coexpression_mm9:98 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.42e-11 | 6 |
muscle cell | 1.42e-11 | 6 |
myoblast | 1.42e-11 | 6 |
mesodermal cell | 8.80e-10 | 7 |
multi-potent skeletal muscle stem cell | 2.15e-07 | 9 |
smooth muscle cell | 4.86e-07 | 3 |
vascular associated smooth muscle cell | 4.86e-07 | 3 |
aortic smooth muscle cell | 4.86e-07 | 3 |
smooth muscle myoblast | 4.86e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculature of body | 7.07e-09 | 10 |
aorta | 5.45e-08 | 4 |
artery | 5.45e-08 | 4 |
systemic artery | 5.45e-08 | 4 |
arterial blood vessel | 5.45e-08 | 4 |
systemic arterial system | 5.45e-08 | 4 |
aortic system | 5.45e-08 | 4 |
arterial system | 5.45e-08 | 4 |
splanchnic layer of lateral plate mesoderm | 1.41e-07 | 33 |
skeletal muscle tissue | 2.15e-07 | 9 |
striated muscle tissue | 2.15e-07 | 9 |
muscle tissue | 2.15e-07 | 9 |
multilaminar epithelium | 2.15e-07 | 9 |
epithelial vesicle | 2.15e-07 | 9 |
musculature | 2.15e-07 | 9 |
somite | 2.15e-07 | 9 |
female reproductive system | 2.15e-07 | 9 |
myotome | 2.15e-07 | 9 |
presomitic mesoderm | 2.15e-07 | 9 |
presumptive segmental plate | 2.15e-07 | 9 |
dermomyotome | 2.15e-07 | 9 |
trunk paraxial mesoderm | 2.15e-07 | 9 |
cardiovascular system | 2.73e-07 | 23 |
circulatory system | 2.73e-07 | 23 |
smooth muscle tissue | 4.86e-07 | 3 |
blood vessel smooth muscle | 4.86e-07 | 3 |
arterial system smooth muscle | 4.86e-07 | 3 |
artery smooth muscle tissue | 4.86e-07 | 3 |
aorta smooth muscle tissue | 4.86e-07 | 3 |