FFCP PHASE1:Mm9::chr12:50478644..50478659,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=76|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:50478644..50478659,+|id=chr12:50478644..50478659,+|ontology_enrichment_celltype=CL:0002609!1.38e-14!6;CL:0002608!6.07e-08!3|ontology_enrichment_celltype_v019_2=CL:0002609,4.13e-46,6;CL:0002608,1.73e-15,3;CL:0000117,2.71e-12,23;CL:0000337,2.71e-12,23;CL:0000540,1.26e-08,33;CL:0000047,1.26e-08,33;CL:0000031,1.26e-08,33;CL:0000404,1.26e-08,33;CL:0000393,2.54e-07,39;CL:0000211,2.54e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000956!3.21e-19!21;UBERON:0001869!3.21e-19!21;UBERON:0000203!3.21e-19!21;UBERON:0002791!5.80e-17!29;UBERON:0003528!5.80e-17!29;UBERON:0001893!5.80e-17!29;UBERON:0002780!9.77e-17!39;UBERON:0001890!9.77e-17!39;UBERON:0006240!9.77e-17!39;UBERON:0003080!3.41e-16!40;UBERON:0002616!1.71e-15!49;UBERON:0000955!4.48e-15!50;UBERON:0006238!4.48e-15!50;UBERON:0002020!7.46e-14!34;UBERON:0000033!2.88e-13!63;UBERON:0001049!9.14e-13!52;UBERON:0005068!9.14e-13!52;UBERON:0006241!9.14e-13!52;UBERON:0007135!9.14e-13!52;UBERON:0003056!2.58e-12!49;UBERON:0002619!6.14e-12!17;UBERON:0001954!6.72e-12!7;UBERON:0003022!6.72e-12!7;UBERON:0002421!6.72e-12!7;UBERON:0000349!6.72e-12!7;UBERON:0002600!6.72e-12!7;UBERON:0007811!5.60e-10!86;UBERON:0001017!1.23e-09!73;UBERON:0005743!1.23e-09!73;UBERON:0000073!3.11e-09!75;UBERON:0001016!3.11e-09!75;UBERON:0000153!1.29e-08!94;UBERON:0002346!5.16e-08!71;UBERON:0003075!5.16e-08!71;UBERON:0007284!5.16e-08!71|ontology_enrichment_uberon_v019_2=UBERON:0000956,3.51e-33,21;UBERON:0001869,3.51e-33,21;UBERON:0000203,3.51e-33,21;UBERON:0001954,4.67e-25,7;UBERON:0003022,4.67e-25,7;UBERON:0002421,4.67e-25,7;UBERON:0000349,4.67e-25,7;UBERON:0002600,4.67e-25,7;UBERON:0003528,4.48e-24,29;UBERON:0002791,4.48e-24,29;UBERON:0001893,4.48e-24,29;UBERON:0002020,1.50e-20,34;UBERON:0002780,6.32e-18,39;UBERON:0001890,6.32e-18,39;UBERON:0006240,6.32e-18,39;UBERON:0003080,1.77e-17,40;UBERON:0002619,4.35e-16,17;UBERON:0002616,3.33e-15,46;UBERON:0000955,7.01e-15,47;UBERON:0006238,7.01e-15,47;UBERON:0003056,2.84e-14,49;UBERON:0001049,1.89e-13,52;UBERON:0005068,1.89e-13,52;UBERON:0006241,1.89e-13,52;UBERON:0007135,1.89e-13,52;UBERON:0000073,5.97e-13,54;UBERON:0002346,6.42e-11,64;UBERON:0003075,6.42e-11,64;UBERON:0007284,6.42e-11,64;UBERON:0010371,1.46e-09,73;UBERON:0001017,1.46e-09,73;UBERON:0001016,2.65e-09,75;UBERON:0010314,1.48e-07,92;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.439372365468944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.15458324928496,5.8052553482627,5.04779907243317,0,0,2.20483438586917,2.1086003624012,0.919218786610021,0,0.383062014255563,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753926112677186,0.521472960576829,0.511430914660661,0.20778804455956,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,2.16099685996497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0.564751842617067,1.84130094602871,0,0.343706364687375,0,0,0,0.900642406448441,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0.280924522409647,0.384150914429216,0.0574354689556133,0,0.579421629724277,0,0,0,0,0.177475806159338,0,0.145346416632329,0.282328141245992,0.0846146078916765,0.365855945745545,0,0,0,0,0.197008964751127,0,0.154936841185966,0.192906610981141,0.999242311751784,0.233931608445408,0.214871054048298,0,0,0|short_description=p@chr12:50478644..50478659,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=76 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:50478644..50478659,+ | |||
|description=CAGE_peak_at_chr12:50478644..50478659,+ | |||
|id=chr12:50478644..50478659,+ | |||
|ontology_enrichment_celltype=CL:0002609!1.38e-14!6;CL:0002608!6.07e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,4.13e-46,6;CL:0002608,1.73e-15,3;CL:0000117,2.71e-12,23;CL:0000337,2.71e-12,23;CL:0000540,1.26e-08,33;CL:0000047,1.26e-08,33;CL:0000031,1.26e-08,33;CL:0000404,1.26e-08,33;CL:0000393,2.54e-07,39;CL:0000211,2.54e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000956!3.21e-19!21;UBERON:0001869!3.21e-19!21;UBERON:0000203!3.21e-19!21;UBERON:0002791!5.80e-17!29;UBERON:0003528!5.80e-17!29;UBERON:0001893!5.80e-17!29;UBERON:0002780!9.77e-17!39;UBERON:0001890!9.77e-17!39;UBERON:0006240!9.77e-17!39;UBERON:0003080!3.41e-16!40;UBERON:0002616!1.71e-15!49;UBERON:0000955!4.48e-15!50;UBERON:0006238!4.48e-15!50;UBERON:0002020!7.46e-14!34;UBERON:0000033!2.88e-13!63;UBERON:0001049!9.14e-13!52;UBERON:0005068!9.14e-13!52;UBERON:0006241!9.14e-13!52;UBERON:0007135!9.14e-13!52;UBERON:0003056!2.58e-12!49;UBERON:0002619!6.14e-12!17;UBERON:0001954!6.72e-12!7;UBERON:0003022!6.72e-12!7;UBERON:0002421!6.72e-12!7;UBERON:0000349!6.72e-12!7;UBERON:0002600!6.72e-12!7;UBERON:0007811!5.60e-10!86;UBERON:0001017!1.23e-09!73;UBERON:0005743!1.23e-09!73;UBERON:0000073!3.11e-09!75;UBERON:0001016!3.11e-09!75;UBERON:0000153!1.29e-08!94;UBERON:0002346!5.16e-08!71;UBERON:0003075!5.16e-08!71;UBERON:0007284!5.16e-08!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,3.51e-33,21;UBERON:0001869,3.51e-33,21;UBERON:0000203,3.51e-33,21;UBERON:0001954,4.67e-25,7;UBERON:0003022,4.67e-25,7;UBERON:0002421,4.67e-25,7;UBERON:0000349,4.67e-25,7;UBERON:0002600,4.67e-25,7;UBERON:0003528,4.48e-24,29;UBERON:0002791,4.48e-24,29;UBERON:0001893,4.48e-24,29;UBERON:0002020,1.50e-20,34;UBERON:0002780,6.32e-18,39;UBERON:0001890,6.32e-18,39;UBERON:0006240,6.32e-18,39;UBERON:0003080,1.77e-17,40;UBERON:0002619,4.35e-16,17;UBERON:0002616,3.33e-15,46;UBERON:0000955,7.01e-15,47;UBERON:0006238,7.01e-15,47;UBERON:0003056,2.84e-14,49;UBERON:0001049,1.89e-13,52;UBERON:0005068,1.89e-13,52;UBERON:0006241,1.89e-13,52;UBERON:0007135,1.89e-13,52;UBERON:0000073,5.97e-13,54;UBERON:0002346,6.42e-11,64;UBERON:0003075,6.42e-11,64;UBERON:0007284,6.42e-11,64;UBERON:0010371,1.46e-09,73;UBERON:0001017,1.46e-09,73;UBERON:0001016,2.65e-09,75;UBERON:0010314,1.48e-07,92;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.439372365468944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.15458324928496,5.8052553482627,5.04779907243317,0,0,2.20483438586917,2.1086003624012,0.919218786610021,0,0.383062014255563,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753926112677186,0.521472960576829,0.511430914660661,0.20778804455956,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,2.16099685996497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0.564751842617067,1.84130094602871,0,0.343706364687375,0,0,0,0.900642406448441,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0.280924522409647,0.384150914429216,0.0574354689556133,0,0.579421629724277,0,0,0,0,0.177475806159338,0,0.145346416632329,0.282328141245992,0.0846146078916765,0.365855945745545,0,0,0,0,0.197008964751127,0,0.154936841185966,0.192906610981141,0.999242311751784,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p@chr12:50478644..50478659,+ | |||
}} |
Latest revision as of 01:57, 5 August 2015
Short description: | p@chr12:50478644..50478659, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:50478644..50478659, + |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 4.13e-46 | 6 |
hippocampal neuron | 1.73e-15 | 3 |
CNS neuron (sensu Vertebrata) | 2.71e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.71e-12 | 23 |
neuron | 1.26e-08 | 33 |
neuronal stem cell | 1.26e-08 | 33 |
neuroblast | 1.26e-08 | 33 |
electrically signaling cell | 1.26e-08 | 33 |
electrically responsive cell | 2.54e-07 | 39 |
electrically active cell | 2.54e-07 | 39 |