FFCP PHASE1:Mm9::chr1:156993921..156993950,-: Difference between revisions
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{{FFCP|EntrezGene=15064|HGNC=|MCL_coexpression_id=4|UniProt=Q8HWB0|association_with_transcript=-11bp_to_ENSMUST00000027744,NM_008209,uc007day.1,uc007daz.1,uc007dba.1,uc011wtv.1_5end|description=CAGE_peak_1_at_Mr1_5end|id=chr1:156993921..156993950,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!7.93e-18!193;UBERON:0004120!7.93e-18!193;UBERON:0006603!7.93e-18!193;UBERON:0003104!5.94e-11!131;UBERON:0009142!5.94e-11!131;UBERON:0001048!5.10e-09!147;UBERON:0000464!1.24e-07!57;UBERON:0005156!3.22e-07!26;UBERON:0000990!3.22e-07!26;UBERON:0003064!3.31e-07!14;UBERON:0001004!7.94e-07!42|ontology_enrichment_uberon_v019_2=UBERON:0000926,7.67e-12,120;UBERON:0004120,7.67e-12,120;UBERON:0006603,7.67e-12,120;UBERON:0001048,7.36e-08,134;UBERON:0005156,3.12e-07,26;UBERON:0000990,3.12e-07,26;UBERON:0003064,3.21e-07,14;UBERON:0001004,8.11e-07,42|phase1_expression=3.68342348341026,0.697950815278722,0.454999239389536,0,0,0,0,15.3656754895476,1.12630977721333,0.70219357896598,0,0.239316476986009,12.497653284978,14.2495255942966,3.66420737997229,3.84703008040669,1.39912375625629,8.3597473819933,8.77532375076728,7.21462408056651,7.22867966284093,2.58156473122302,2.35079810225042,0.799962113967033,0.45881856213434,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0.577703239502549,0.332469290716985,0,0.418531630736908,1.5626706890476,0,1.17646297606203,0,0.485510353031154,25.305260413091,19.8698785190249,19.4559557291382,0,1.30815093828268,4.83309602015838,3.69416808241138,5.17949760013841,1.43752564364972,2.18117387875057,3.62681071005672,4.03312558970957,9.00408026125814,15.1862723167541,14.9544906760458,0,0,0,1.35537812827653,0,3.1496490104849,2.96659908770092,0.7104801149461,0.898800331555214,2.68952813725088,0.311068836925433,0.270011876663381,0.420649922702764,0.856952953211411,1.54607978666129,0.122490799214954,0.191690942036473,0,1.10115880999389,2.29837208553338,2.4577045320999,0.131886287730194,0.457438218012048,0,3.35019598801657,3.93933827022176,3.51435969886663,2.35702868378934,3.13217697758026,0.372798891650601,1.51452386666368,8.01058537131927,17.3918693221007,8.60423876981386,3.39985666853875,5.39703191637817,3.89865850468601,3.13618820968135,13.3422199125164,19.7699174190547,8.05336614268893,6.00677276667578,15.3519327556582,6.41632387071589,2.54805239706646,7.11066703153331,2.81438353314578,2.78695852022608,4.04419556011827,9.24889425724386,23.0454716445983,36.5167662099469,4.68410382268567,10.0473607843007,10.3776973765226,14.6200961336044,22.694620477191,19.4783216560997,4.44950941921873,34.7038456607788,5.30766331169925,6.79420769779119,5.07935492458905,6.78825354389311,11.1835056730873,6.73395833126558,4.60782754989601,5.10914110417183,2.75574786363617,1.79970819298022,1.52484272487678,7.18995069143149,6.40500843946077,0.376963056338593,6.43149984711423,3.06858548796397,6.44142938134636,5.353961681236,17.2108524907035,16.048499208702,21.4814344668623,22.9381622916257,2.47228841629137,1.60931473103431,2.52086981727489,3.46621081022145,4.69451844144162,6.40568601424249,4.31027932974753,16.039608985819,1.29340795759705,5.29497024469894,7.2139960907219,6.79506770525482,10.0097009721215,10.7958171621872,15.0220959577799,6.36909653819178,2.80885274925294,1.54408744268829,1.98914449576915,2.27838349789052,4.22146907965973,4.14142741360334,11.3637473080901,5.90292695242211,5.86215028972037,6.97601834251224,8.85302224618743,8.75740067753771,9.2153515951549,16.7450813360677,13.8627664323413,13.8889988054066,12.7339066868809,16.3731830887654,6.9395683026162,4.73361216944708,2.31293148088659,3.43785736662608,4.26576501070468,2.55460339046482,4.25262622362908,6.05050573870028,5.55945109612176,6.08722003560189,3.79623249235609,5.10566759644434,5.02670417600539,11.1415624343044,6.62877896205008,7.19055526923377,3.8904848977445,6.57166201739412,3.03468641524931,5.48392860526698,7.88954149711563,5.09128319613286,7.5641469995374,6.52263124979963,12.7737804991,12.1040321343274,10.8329122210549,12.8333050478673,6.22550516883013,0.667380422864376,0.393117990226406,0.899448449539415,0.405720242777006,1.20588579876208,1.2731292589071,4.89083433666378,3.72911021582581,1.09824565275233,4.31304619582064,4.83783231969054,4.68056509671841,4.2938409251009,6.27890947326693,4.82443521363367,30.6690295676564,2.08440552947533,9.4519686336375,8.65699937453459,8.44884893838608,13.9030193676707,16.1869675802489,7.61021226645415,22.0689201748667,22.3679336545263,15.3076577911188,22.4492741160561,20.3768278601757,23.7224456073679,15.0791283939272,3.80733978673097,7.37646409528554,7.72622889653251,8.34863067936518,7.2671245687166,13.114795630134,21.4600288123717,1.26203287766503,3.90438744296638,2.15423397732799,5.4962823529087,5.56996685205985,3.67999490025482,2.42886421004937,2.92255857911312,3.55759000151871,9.3183181762324,28.8138372972785,10.8620018237026,9.61033060186099,32.334144102617,14.6019652173959,3.3989289061697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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:15064 | |||
|HGNC= | |||
|MCL_coexpression_id=4 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8HWB0 | |||
|association_with_transcript=-11bp_to_ENSMUST00000027744,NM_008209,uc007day.1,uc007daz.1,uc007dba.1,uc011wtv.1_5end | |||
|cluster_id=chr1:156993921..156993950,- | |||
|description=CAGE_peak_1_at_Mr1_5end | |||
|id=chr1:156993921..156993950,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!7.93e-18!193;UBERON:0004120!7.93e-18!193;UBERON:0006603!7.93e-18!193;UBERON:0003104!5.94e-11!131;UBERON:0009142!5.94e-11!131;UBERON:0001048!5.10e-09!147;UBERON:0000464!1.24e-07!57;UBERON:0005156!3.22e-07!26;UBERON:0000990!3.22e-07!26;UBERON:0003064!3.31e-07!14;UBERON:0001004!7.94e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,7.67e-12,120;UBERON:0004120,7.67e-12,120;UBERON:0006603,7.67e-12,120;UBERON:0001048,7.36e-08,134;UBERON:0005156,3.12e-07,26;UBERON:0000990,3.12e-07,26;UBERON:0003064,3.21e-07,14;UBERON:0001004,8.11e-07,42 | |||
|phase1_expression=3.68342348341026,0.697950815278722,0.454999239389536,0,0,0,0,15.3656754895476,1.12630977721333,0.70219357896598,0,0.239316476986009,12.497653284978,14.2495255942966,3.66420737997229,3.84703008040669,1.39912375625629,8.3597473819933,8.77532375076728,7.21462408056651,7.22867966284093,2.58156473122302,2.35079810225042,0.799962113967033,0.45881856213434,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0.577703239502549,0.332469290716985,0,0.418531630736908,1.5626706890476,0,1.17646297606203,0,0.485510353031154,25.305260413091,19.8698785190249,19.4559557291382,0,1.30815093828268,4.83309602015838,3.69416808241138,5.17949760013841,1.43752564364972,2.18117387875057,3.62681071005672,4.03312558970957,9.00408026125814,15.1862723167541,14.9544906760458,0,0,0,1.35537812827653,0,3.1496490104849,2.96659908770092,0.7104801149461,0.898800331555214,2.68952813725088,0.311068836925433,0.270011876663381,0.420649922702764,0.856952953211411,1.54607978666129,0.122490799214954,0.191690942036473,0,1.10115880999389,2.29837208553338,2.4577045320999,0.131886287730194,0.457438218012048,0,3.35019598801657,3.93933827022176,3.51435969886663,2.35702868378934,3.13217697758026,0.372798891650601,1.51452386666368,8.01058537131927,17.3918693221007,8.60423876981386,3.39985666853875,5.39703191637817,3.89865850468601,3.13618820968135,13.3422199125164,19.7699174190547,8.05336614268893,6.00677276667578,15.3519327556582,6.41632387071589,2.54805239706646,7.11066703153331,2.81438353314578,2.78695852022608,4.04419556011827,9.24889425724386,23.0454716445983,36.5167662099469,4.68410382268567,10.0473607843007,10.3776973765226,14.6200961336044,22.694620477191,19.4783216560997,4.44950941921873,34.7038456607788,5.30766331169925,6.79420769779119,5.07935492458905,6.78825354389311,11.1835056730873,6.73395833126558,4.60782754989601,5.10914110417183,2.75574786363617,1.79970819298022,1.52484272487678,7.18995069143149,6.40500843946077,0.376963056338593,6.43149984711423,3.06858548796397,6.44142938134636,5.353961681236,17.2108524907035,16.048499208702,21.4814344668623,22.9381622916257,2.47228841629137,1.60931473103431,2.52086981727489,3.46621081022145,4.69451844144162,6.40568601424249,4.31027932974753,16.039608985819,1.29340795759705,5.29497024469894,7.2139960907219,6.79506770525482,10.0097009721215,10.7958171621872,15.0220959577799,6.36909653819178,2.80885274925294,1.54408744268829,1.98914449576915,2.27838349789052,4.22146907965973,4.14142741360334,11.3637473080901,5.90292695242211,5.86215028972037,6.97601834251224,8.85302224618743,8.75740067753771,9.2153515951549,16.7450813360677,13.8627664323413,13.8889988054066,12.7339066868809,16.3731830887654,6.9395683026162,4.73361216944708,2.31293148088659,3.43785736662608,4.26576501070468,2.55460339046482,4.25262622362908,6.05050573870028,5.55945109612176,6.08722003560189,3.79623249235609,5.10566759644434,5.02670417600539,11.1415624343044,6.62877896205008,7.19055526923377,3.8904848977445,6.57166201739412,3.03468641524931,5.48392860526698,7.88954149711563,5.09128319613286,7.5641469995374,6.52263124979963,12.7737804991,12.1040321343274,10.8329122210549,12.8333050478673,6.22550516883013,0.667380422864376,0.393117990226406,0.899448449539415,0.405720242777006,1.20588579876208,1.2731292589071,4.89083433666378,3.72911021582581,1.09824565275233,4.31304619582064,4.83783231969054,4.68056509671841,4.2938409251009,6.27890947326693,4.82443521363367,30.6690295676564,2.08440552947533,9.4519686336375,8.65699937453459,8.44884893838608,13.9030193676707,16.1869675802489,7.61021226645415,22.0689201748667,22.3679336545263,15.3076577911188,22.4492741160561,20.3768278601757,23.7224456073679,15.0791283939272,3.80733978673097,7.37646409528554,7.72622889653251,8.34863067936518,7.2671245687166,13.114795630134,21.4600288123717,1.26203287766503,3.90438744296638,2.15423397732799,5.4962823529087,5.56996685205985,3.67999490025482,2.42886421004937,2.92255857911312,3.55759000151871,9.3183181762324,28.8138372972785,10.8620018237026,9.61033060186099,32.334144102617,14.6019652173959,3.39892890616974,1.81394134178851,6.60117779145643,4.13422650033082,9.83792473420568,5.94385074286909,7.99774204850512,7.84294232446387,6.63677191665214,9.48767477174989,7.21948802737308,26.8947288545492,3.6012218806262,2.45781499187234,7.50179622610573,8.51233121482913,8.02659679209317,9.54384319492302,4.26250928760439,4.22409074514679,5.2958017715955,48.7367759701466,14.6748765117917,14.2088695492397,9.52944213864862,8.47543642422269,5.74493149107714,5.82961673259701,10.0129663085675,4.61351378154202,8.04908785056568,8.88933731374616,5.27431679613135,4.92099219795691,5.0331198105435,5.94924504978494,7.27747552083022,5.38979897837253,24.821436068393,3.79603192297362,9.96265388921559,6.37231510848627,10.0362382086945,10.9181281873089,9.30563990055263,14.1337409290324,8.63794608547298,9.72112299688447,18.0188400795208,2.81846469342095,6.57872802593507,5.95650565645551,16.7228021975881,13.949260935595,18.247261553004,22.0631608654017,10.2861464026721,8.49360689848258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| |||
|short_description=p1@Mr1 | |||
}} |
Revision as of 01:16, 5 August 2015
Short description: | p1@Mr1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mr1_5end |
Coexpression cluster: | MCL_coexpression_mm9:4 |
Association with transcript: | -11bp_to_ENSMUST00000027744, NM_008209, uc007day.1, uc007daz.1, uc007dba.1, uc011wtv.1_5end |
EntrezGene: | 15064 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesoderm | 7.67e-12 | 120 |
mesoderm-derived structure | 7.67e-12 | 120 |
presumptive mesoderm | 7.67e-12 | 120 |
primordium | 7.36e-08 | 134 |
reproductive structure | 3.12e-07 | 26 |
reproductive system | 3.12e-07 | 26 |
intermediate mesoderm | 3.21e-07 | 14 |
respiratory system | 8.11e-07 | 42 |