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FFCP PHASE1:Mm9::chr10:88969376..88969395,-: Difference between revisions

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{{FFCP|EntrezGene=20186|HGNC=|MCL_coexpression_id=166|UniProt=Q3V1T8,Q60641|association_with_transcript=0bp_to_ENSMUST00000058126_5end|description=CAGE_peak_1_at_Nr1h4_5end|id=chr10:88969376..88969395,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002563,6.37e-07,9;CL:0002251,6.37e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.68e-26!59;UBERON:0000160!1.78e-24!43;UBERON:0004119!9.38e-16!130;UBERON:0000925!9.38e-16!130;UBERON:0006595!9.38e-16!130;UBERON:0001007!2.80e-15!128;UBERON:0001555!2.80e-15!128;UBERON:0007026!2.80e-15!128;UBERON:0004921!2.54e-14!126;UBERON:0004185!2.54e-14!126;UBERON:0009854!3.42e-11!23;UBERON:0009856!3.42e-11!23;UBERON:0002107!1.48e-10!22;UBERON:0007499!1.48e-10!22;UBERON:0006925!1.48e-10!22;UBERON:0009497!1.48e-10!22;UBERON:0000015!1.48e-10!22;UBERON:0002423!1.48e-10!22;UBERON:0006235!1.48e-10!22;UBERON:0008835!1.48e-10!22;UBERON:0003894!1.48e-10!22;UBERON:0004161!1.48e-10!22;UBERON:0008836!1.48e-10!22;UBERON:0000344!2.06e-10!15;UBERON:0005172!2.25e-10!49;UBERON:0005173!2.25e-10!49;UBERON:0002417!2.25e-10!49;UBERON:0000916!2.25e-10!49;UBERON:0001242!2.11e-09!13;UBERON:0000060!2.11e-09!13;UBERON:0001262!2.11e-09!13;UBERON:0004786!2.11e-09!13;UBERON:0004923!4.68e-09!24;UBERON:0002365!2.56e-08!25;UBERON:0002330!2.56e-08!25;UBERON:0002108!2.32e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.40e-23,31;UBERON:0005409,3.35e-21,47;UBERON:0004119,3.39e-12,118;UBERON:0000925,3.39e-12,118;UBERON:0006595,3.39e-12,118;UBERON:0001007,9.51e-12,116;UBERON:0001555,9.51e-12,116;UBERON:0007026,9.51e-12,116;UBERON:0000344,1.76e-11,15;UBERON:0004921,7.55e-11,114;UBERON:0009854,7.84e-11,23;UBERON:0009856,7.84e-11,23;UBERON:0001242,2.38e-10,13;UBERON:0001262,2.38e-10,13;UBERON:0004786,2.38e-10,13;UBERON:0002107,3.84e-10,22;UBERON:0007499,3.84e-10,22;UBERON:0006925,3.84e-10,22;UBERON:0009497,3.84e-10,22;UBERON:0000015,3.84e-10,22;UBERON:0002423,3.84e-10,22;UBERON:0006235,3.84e-10,22;UBERON:0008835,3.84e-10,22;UBERON:0003894,3.84e-10,22;UBERON:0004161,3.84e-10,22;UBERON:0008836,3.84e-10,22;UBERON:0002365,3.95e-08,25;UBERON:0002330,3.95e-08,25;UBERON:0004923,1.54e-07,24;UBERON:0005172,5.39e-07,49;UBERON:0005173,5.39e-07,49;UBERON:0002417,5.39e-07,49;UBERON:0000916,5.39e-07,49;UBERON:0003350,6.37e-07,9;UBERON:0004808,6.37e-07,9;UBERON:0001277,6.37e-07,9|phase1_expression=0.160148847104794,75.378688050102,69.614883626599,134.899038242846,128.229306866265,26.3570456901667,31.7713191209915,0,0,0,0,0,0,0,0,0,0,0,0,0,17.6039610612714,0,0,31.8384921358879,31.1996622251351,63.1655160526522,80.1217312855879,50.2047972158121,228.028103347649,94.763328789734,93.126814475228,0,0,0,21.6638714813456,12.1351291111699,16.1293791447272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.34796733052517,61.9505191426598,61.1974200336975,80.9554787456726,137.752600498906,157.705464258262,42.9759925603161,0,0,0,0,0,0,0,0,0,0,107.104479176478,0,0.445326417194474,0,0,1.15307748628029,0.904335843315735,1.29347577849275,1.63366568728578,50.922163353281,0.144599356919912,0,0.161766849947409,0,0,78.2845397116113,0,0,70.2506901823626,0,0,0,0,0,0,0,0,0,0,1.93494791315601,0.124406970610093,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0.378212160335639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,147.366777210774,80.657422832381,1.2797295032114,3.0190767341857,27.1910343389617,114.959609035305,144.990484586855,161.31133094345,62.6378361238755,161.734373538979,140.999052136951,176.474390700501,134.915148286431,90.7807602740764,85.8068058002536,98.176647714403,0,0.685491075658373,4.50830942692322,5.09128319613286,9.30971938404604,31.2805756710821,24.7887225527089,66.8673970347598,83.8373206672942,101.555865907642,209.888459977701,0.166845105716094,0,0.899448449539415,1.42002084971952,5.788251834058,9.42115651591253,25.0295639582205,52.5318134751115,43.1061418705288,71.8841032636773,72.5674847953582,55.5427058143918,125.279123461767,130.780714457474,108.549792306758,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0.712262414669021,0.325773918707152,0,9.2921596837974,1.45668381692989,2.41858845571801,3.77210159511796,4.13422650033082,4.30409207121498,31.7866800596912,9.08834323693764,13.1904030002347,12.6414703174326,26.3546521437497,25.7838858120467,0,0,0,0,0,0,0.164549020602121,0,2.11204537257339,3.60114520468494,0,0,0,0,0,0.164140899745061,91.2335018651433,0,0,0.206386867963223,0.185194527369712,0.188368457004691,0,0.228778173206523,0,0,0,17.184071124272,0.158167996790568,1.42323626988794,13.7166782843688,7.3180903605064,18.5608179184251,19.0158728402597,20.663363931334,12.0407733312654,164.870246027161,0,0,0,0,0,0,0,0.117357238645754,1.17183946359555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.75656911624255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70174701947806,0.838452650511929,6.43452279575049,11.7790765734856,12.9802086060503,9.30665707816264,6.57012750585873,11.9135270948413,13.0152175556393,11.7988299412052,10.5641501468034,12.3486258254569,11.9073422820768,8.69132444586416,10.8029163459675,9.06588981767275,12.217510371155,11.3146853287187,10.8260241757196,12.637118067208,10.4649419975277,10.0697037044404,9.7306799075428,11.7073902638574,10.7858581689516,9.91370031074791,10.1005608898393,7.3553711236988,8.37288100192289,12.2769312950907,8.36658942404216,6.55882477335881,0,15.439486157397,17.8342974860088,0.57386499620653,0.661774257358546,0.695603506861264|short_description=p1@Nr1h4}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:20186
|HGNC=
|MCL_coexpression_id=166
|TSSclassifier=NA
|UniProt=uniprot:Q3V1T8,uniprot:Q60641
|association_with_transcript=0bp_to_ENSMUST00000058126_5end
|cluster_id=chr10:88969376..88969395,-
|description=CAGE_peak_1_at_Nr1h4_5end
|id=chr10:88969376..88969395,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002563,6.37e-07,9;CL:0002251,6.37e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!1.68e-26!59;UBERON:0000160!1.78e-24!43;UBERON:0004119!9.38e-16!130;UBERON:0000925!9.38e-16!130;UBERON:0006595!9.38e-16!130;UBERON:0001007!2.80e-15!128;UBERON:0001555!2.80e-15!128;UBERON:0007026!2.80e-15!128;UBERON:0004921!2.54e-14!126;UBERON:0004185!2.54e-14!126;UBERON:0009854!3.42e-11!23;UBERON:0009856!3.42e-11!23;UBERON:0002107!1.48e-10!22;UBERON:0007499!1.48e-10!22;UBERON:0006925!1.48e-10!22;UBERON:0009497!1.48e-10!22;UBERON:0000015!1.48e-10!22;UBERON:0002423!1.48e-10!22;UBERON:0006235!1.48e-10!22;UBERON:0008835!1.48e-10!22;UBERON:0003894!1.48e-10!22;UBERON:0004161!1.48e-10!22;UBERON:0008836!1.48e-10!22;UBERON:0000344!2.06e-10!15;UBERON:0005172!2.25e-10!49;UBERON:0005173!2.25e-10!49;UBERON:0002417!2.25e-10!49;UBERON:0000916!2.25e-10!49;UBERON:0001242!2.11e-09!13;UBERON:0000060!2.11e-09!13;UBERON:0001262!2.11e-09!13;UBERON:0004786!2.11e-09!13;UBERON:0004923!4.68e-09!24;UBERON:0002365!2.56e-08!25;UBERON:0002330!2.56e-08!25;UBERON:0002108!2.32e-07!16
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.40e-23,31;UBERON:0005409,3.35e-21,47;UBERON:0004119,3.39e-12,118;UBERON:0000925,3.39e-12,118;UBERON:0006595,3.39e-12,118;UBERON:0001007,9.51e-12,116;UBERON:0001555,9.51e-12,116;UBERON:0007026,9.51e-12,116;UBERON:0000344,1.76e-11,15;UBERON:0004921,7.55e-11,114;UBERON:0009854,7.84e-11,23;UBERON:0009856,7.84e-11,23;UBERON:0001242,2.38e-10,13;UBERON:0001262,2.38e-10,13;UBERON:0004786,2.38e-10,13;UBERON:0002107,3.84e-10,22;UBERON:0007499,3.84e-10,22;UBERON:0006925,3.84e-10,22;UBERON:0009497,3.84e-10,22;UBERON:0000015,3.84e-10,22;UBERON:0002423,3.84e-10,22;UBERON:0006235,3.84e-10,22;UBERON:0008835,3.84e-10,22;UBERON:0003894,3.84e-10,22;UBERON:0004161,3.84e-10,22;UBERON:0008836,3.84e-10,22;UBERON:0002365,3.95e-08,25;UBERON:0002330,3.95e-08,25;UBERON:0004923,1.54e-07,24;UBERON:0005172,5.39e-07,49;UBERON:0005173,5.39e-07,49;UBERON:0002417,5.39e-07,49;UBERON:0000916,5.39e-07,49;UBERON:0003350,6.37e-07,9;UBERON:0004808,6.37e-07,9;UBERON:0001277,6.37e-07,9
|phase1_expression=0.160148847104794,75.378688050102,69.614883626599,134.899038242846,128.229306866265,26.3570456901667,31.7713191209915,0,0,0,0,0,0,0,0,0,0,0,0,0,17.6039610612714,0,0,31.8384921358879,31.1996622251351,63.1655160526522,80.1217312855879,50.2047972158121,228.028103347649,94.763328789734,93.126814475228,0,0,0,21.6638714813456,12.1351291111699,16.1293791447272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.34796733052517,61.9505191426598,61.1974200336975,80.9554787456726,137.752600498906,157.705464258262,42.9759925603161,0,0,0,0,0,0,0,0,0,0,107.104479176478,0,0.445326417194474,0,0,1.15307748628029,0.904335843315735,1.29347577849275,1.63366568728578,50.922163353281,0.144599356919912,0,0.161766849947409,0,0,78.2845397116113,0,0,70.2506901823626,0,0,0,0,0,0,0,0,0,0,1.93494791315601,0.124406970610093,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0.378212160335639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,147.366777210774,80.657422832381,1.2797295032114,3.0190767341857,27.1910343389617,114.959609035305,144.990484586855,161.31133094345,62.6378361238755,161.734373538979,140.999052136951,176.474390700501,134.915148286431,90.7807602740764,85.8068058002536,98.176647714403,0,0.685491075658373,4.50830942692322,5.09128319613286,9.30971938404604,31.2805756710821,24.7887225527089,66.8673970347598,83.8373206672942,101.555865907642,209.888459977701,0.166845105716094,0,0.899448449539415,1.42002084971952,5.788251834058,9.42115651591253,25.0295639582205,52.5318134751115,43.1061418705288,71.8841032636773,72.5674847953582,55.5427058143918,125.279123461767,130.780714457474,108.549792306758,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0.712262414669021,0.325773918707152,0,9.2921596837974,1.45668381692989,2.41858845571801,3.77210159511796,4.13422650033082,4.30409207121498,31.7866800596912,9.08834323693764,13.1904030002347,12.6414703174326,26.3546521437497,25.7838858120467,0,0,0,0,0,0,0.164549020602121,0,2.11204537257339,3.60114520468494,0,0,0,0,0,0.164140899745061,91.2335018651433,0,0,0.206386867963223,0.185194527369712,0.188368457004691,0,0.228778173206523,0,0,0,17.184071124272,0.158167996790568,1.42323626988794,13.7166782843688,7.3180903605064,18.5608179184251,19.0158728402597,20.663363931334,12.0407733312654,164.870246027161,0,0,0,0,0,0,0,0.117357238645754,1.17183946359555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.75656911624255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70174701947806,0.838452650511929,6.43452279575049,11.7790765734856,12.9802086060503,9.30665707816264,6.57012750585873,11.9135270948413,13.0152175556393,11.7988299412052,10.5641501468034,12.3486258254569,11.9073422820768,8.69132444586416,10.8029163459675,9.06588981767275,12.217510371155,11.3146853287187,10.8260241757196,12.637118067208,10.4649419975277,10.0697037044404,9.7306799075428,11.7073902638574,10.7858581689516,9.91370031074791,10.1005608898393,7.3553711236988,8.37288100192289,12.2769312950907,8.36658942404216,6.55882477335881,0,15.439486157397,17.8342974860088,0.57386499620653,0.661774257358546,0.695603506861264
|short_description=p1@Nr1h4
}}

Revision as of 00:19, 5 August 2015

Short description:p1@Nr1h4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nr1h4_5end
Coexpression cluster:MCL_coexpression_mm9:166
Association with transcript: 0bp_to_ENSMUST00000058126_5end
EntrezGene:20186
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Nr1h4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I575.38
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I669.61
CD326+ enterocyte, pool1.CNhs13542.11848-124I3134.90
CD326+ enterocyte, pool2.CNhs13197.11849-124I4128.23
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I726.36
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I831.77
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A317.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D131.84
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D231.20
GP2+ M cell, pool1.CNhs13228.11845-124H963.17
GP2+ M cell, pool2.CNhs13231.11846-124I180.12
GP2+ M cell, pool3.CNhs13240.11847-124I250.20
Ileum epithelium, pool1.CNhs13199.10252-104B9228.03
Ileum epithelium, pool2.CNhs13232.10253-104C194.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C893.13
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F521.66
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F612.14
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F716.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F761.95
Mouse hepatocyte, donor1.CNhs13078.11714-123C461.20
Mouse hepatocyte, donor3.CNhs12615.11637-122C880.96
Mouse hepatocyte, donor6.CNhs13090.11822-124F4137.75
Mouse hepatocyte, donor8.CNhs13091.11824-124F6157.71
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A742.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6107.10
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I31.63
amnion, adult pregnant day17.5.CNhs10488.583-22A850.92
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H478.28
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H770.25
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.93
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I3147.37
intestine, adult.CNhs10496.178-9A380.66
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D53.02
intestine, embryo E15.CNhs10602.976-16D827.19
intestine, embryo E16.CNhs10585.463-22H4114.96
intestine, embryo E17.CNhs10582.482-18D3144.99
intestine, embryo E18.CNhs10526.1289-20F7161.31
intestine, neonate N00.CNhs11126.644-26D162.64
intestine, neonate N01.CNhs11192.1322-23E9161.73
intestine, neonate N06.CNhs11102.688-20B8141.00
intestine, neonate N07.CNhs11095.720-20F2176.47
intestine, neonate N10.CNhs11098.755-23A5134.92
intestine, neonate N20.CNhs11187.827-18D190.78
intestine, neonate N25.CNhs11121.1352-25E385.81
intestine, neonate N30.CNhs11131.1384-42G198.18
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I25.09
kidney, embryo E18.CNhs11001.1288-20C79.31
kidney, neonate N00.CNhs11214.646-21G731.28
kidney, neonate N10.CNhs11206.758-6D524.79
kidney, neonate N20.CNhs11113.832-19I166.87
kidney, neonate N25.CNhs11122.1353-25F383.84
kidney, neonate N30.CNhs11203.1385-42H1101.56
liver, adult pregnant day01.CNhs10466.508-5B2209.89
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F55.79
liver, embryo E17.CNhs10510.481-18A39.42
liver, embryo E18.CNhs10579.499-43G425.03
liver, neonate N00.CNhs11117.641-24F452.53
liver, neonate N03.CNhs11123.1345-25G243.11
liver, neonate N06.CNhs11101.684-20A871.88
liver, neonate N07.CNhs11103.716-20H272.57
liver, neonate N10.CNhs11115.751-24B955.54
liver, neonate N20.CNhs11220.823-25A3125.28
liver, neonate N25.CNhs11198.1368-26H1130.78
liver, neonate N30.CNhs11106.1382-42D1108.55
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E53.77
pancreas, embryo E17.CNhs10599.1558-45G34.13
pancreas, embryo E18.CNhs10580.1535-43I74.30
pancreas, neonate N00.CNhs11105.645-26G931.79
pancreas, neonate N01.CNhs11138.1531-43D79.09
pancreas, neonate N02.CNhs11139.1539-43D813.19
pancreas, neonate N16.CNhs11136.787-43B612.64
pancreas, neonate N25.CNhs11094.1555-45E226.35
pancreas, neonate N30.CNhs11182.1548-44H525.78
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G33.60
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I191.23
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H617.18
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D413.72
stomach, embryo E17.CNhs11006.1035-18D57.32
stomach, embryo E18.CNhs10999.1286-20C618.56
stomach, neonate N03.CNhs11193.1340-24B819.02
stomach, neonate N07.CNhs11210.718-18A920.66
stomach, neonate N25.CNhs11104.1355-25E412.04
stomach, neonate N30.CNhs11134.1386-42I1164.87
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I41.17
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F56.76
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F26.43
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G511.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G512.98
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.31
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G511.91
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G513.02
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G511.80
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G510.56
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.35
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G511.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.69
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.80
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.07
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G512.22
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G511.31
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G510.83
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.64
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.46
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.73
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G511.71
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G510.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.91
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.10
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.37
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G512.28
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.37
whole body, embryo E17.5.CNhs10513.490-9F96.56
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B315.44
whole body, neonate N00.CNhs10525.657-19C217.83
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
intestinal epithelial cell6.37e-079
epithelial cell of alimentary canal6.37e-079

Uber anatomy
Ontology termp-valuen
intestine1.40e-2331
gastrointestinal system3.35e-2147
endoderm-derived structure3.39e-12118
endoderm3.39e-12118
presumptive endoderm3.39e-12118
digestive system9.51e-12116
digestive tract9.51e-12116
primitive gut9.51e-12116
mucosa1.76e-1115
subdivision of digestive tract7.55e-11114
digestive tract diverticulum7.84e-1123
sac7.84e-1123
intestinal mucosa2.38e-1013
wall of intestine2.38e-1013
gastrointestinal system mucosa2.38e-1013
liver3.84e-1022
epithelial sac3.84e-1022
digestive gland3.84e-1022
epithelium of foregut-midgut junction3.84e-1022
anatomical boundary3.84e-1022
hepatobiliary system3.84e-1022
foregut-midgut junction3.84e-1022
hepatic diverticulum3.84e-1022
liver primordium3.84e-1022
septum transversum3.84e-1022
liver bud3.84e-1022
exocrine gland3.95e-0825
exocrine system3.95e-0825
organ component layer1.54e-0724
abdomen element5.39e-0749
abdominal segment element5.39e-0749
abdominal segment of trunk5.39e-0749
abdomen5.39e-0749
epithelium of mucosa6.37e-079
gastrointestinal system epithelium6.37e-079
intestinal epithelium6.37e-079
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