FFCP PHASE1:Mm9::chr12:3365143..3365207,+: Difference between revisions
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{{FFCP|EntrezGene=16570|HGNC=|MCL_coexpression_id=13|UniProt=O35066,Q571A6|association_with_transcript=11bp_to_ENSMUST00000020999,ENSMUST00000168012,NM_008445,uc007mwm.1,uc007mwn.1_5end|description=CAGE_peak_2_at_Kif3c_5end|id=chr12:3365143..3365207,+|ontology_enrichment_celltype=CL:0000221!2.00e-18!44;CL:0000133!2.00e-18!44;CL:0002319!2.03e-18!43;CL:0000540!4.07e-15!33;CL:0000047!4.07e-15!33;CL:0000031!4.07e-15!33;CL:0000404!4.07e-15!33;CL:0000055!7.36e-15!50;CL:0000117!1.28e-14!23;CL:0000337!1.28e-14!23;CL:0000393!1.47e-12!39;CL:0000211!1.47e-12!39|ontology_enrichment_celltype_v019_2=CL:0000221,1.40e-18,44;CL:0000133,1.40e-18,44;CL:0002319,1.42e-18,43;CL:0000540,3.05e-15,33;CL:0000047,3.05e-15,33;CL:0000031,3.05e-15,33;CL:0000404,3.05e-15,33;CL:0000117,9.70e-15,23;CL:0000337,9.70e-15,23;CL:0000393,1.17e-12,39;CL:0000211,1.17e-12,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.57e-34!75;UBERON:0001016!2.57e-34!75;UBERON:0001017!9.34e-34!73;UBERON:0005743!9.34e-34!73;UBERON:0004121!9.42e-29!102;UBERON:0000924!9.42e-29!102;UBERON:0006601!9.42e-29!102;UBERON:0001049!3.48e-26!52;UBERON:0005068!3.48e-26!52;UBERON:0006241!3.48e-26!52;UBERON:0007135!3.48e-26!52;UBERON:0002346!8.58e-26!71;UBERON:0003075!8.58e-26!71;UBERON:0007284!8.58e-26!71;UBERON:0000033!4.08e-25!63;UBERON:0000955!7.86e-25!50;UBERON:0006238!7.86e-25!50;UBERON:0002616!2.71e-24!49;UBERON:0002020!2.44e-21!34;UBERON:0003056!4.44e-21!49;UBERON:0000153!4.53e-20!94;UBERON:0007811!8.12e-20!86;UBERON:0003080!9.52e-20!40;UBERON:0002780!3.04e-19!39;UBERON:0001890!3.04e-19!39;UBERON:0006240!3.04e-19!39;UBERON:0002791!2.40e-18!29;UBERON:0003528!2.40e-18!29;UBERON:0001893!2.40e-18!29;UBERON:0000956!1.16e-13!21;UBERON:0001869!1.16e-13!21;UBERON:0000203!1.16e-13!21;UBERON:0002619!5.32e-11!17;UBERON:0002021!1.31e-07!10;UBERON:0000411!1.31e-07!10;UBERON:0001950!1.31e-07!10;UBERON:0003076!5.82e-07!12;UBERON:0003057!5.82e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.27e-34,75;UBERON:0001017,4.68e-34,73;UBERON:0004121,1.02e-29,95;UBERON:0000924,1.02e-29,95;UBERON:0006601,1.02e-29,95;UBERON:0002346,5.40e-28,64;UBERON:0003075,5.40e-28,64;UBERON:0007284,5.40e-28,64;UBERON:0000073,9.40e-28,54;UBERON:0001049,2.06e-26,52;UBERON:0005068,2.06e-26,52;UBERON:0006241,2.06e-26,52;UBERON:0007135,2.06e-26,52;UBERON:0010371,2.87e-23,73;UBERON:0000955,3.15e-23,47;UBERON:0006238,3.15e-23,47;UBERON:0002616,1.08e-22,46;UBERON:0002020,1.60e-21,34;UBERON:0003056,2.93e-21,49;UBERON:0003080,6.46e-20,40;UBERON:0010314,1.25e-19,92;UBERON:0002780,2.08e-19,39;UBERON:0001890,2.08e-19,39;UBERON:0006240,2.08e-19,39;UBERON:0003528,1.68e-18,29;UBERON:0002791,1.68e-18,29;UBERON:0001893,1.68e-18,29;UBERON:0000956,8.98e-14,21;UBERON:0001869,8.98e-14,21;UBERON:0000203,8.98e-14,21;UBERON:0002619,4.35e-11,17;UBERON:0002021,1.15e-07,10;UBERON:0000411,1.15e-07,10;UBERON:0001950,1.15e-07,10;UBERON:0003076,5.18e-07,12;UBERON:0003057,5.18e-07,12|phase1_expression=5.2849119544582,0,0,0,0,0.16787927191189,0,3.09895976259783,0.84473233291,0,0,0.159544317990673,1.88320802924326,3.84649770643589,0.333109761815663,0.202475267389826,0,2.68142840554502,2.05671650408608,2.12194825899015,8.50432901510698,1.78723712161594,1.04479915655574,0,0.22940928106717,0,0,0,0.190023419456374,0,0,1.90509202037889,0,0,0,0,0,0.418531630736908,0.7813353445238,0,0,0.683045484958446,0,1.76255545165808,2.23029248682932,2.38610777810186,8.60630478782843,11.1192829754028,8.5677611266444,8.94377535741704,8.81914456239784,7.18762821824858,2.34895648480831,3.62681071005672,4.7053131879945,2.82985379639542,4.87106847895886,2.57836046138721,54.0184950495126,32.268449735594,54.5095007015314,3.72728985276045,8.00365316500025,3.5995988691256,2.96659908770092,1.4209602298922,11.3848041996994,9.22123932771731,57.6514244435136,56.1624703459833,61.8355386373063,50.845875223877,41.0815486170001,48.9963196859816,50.2230268135559,44.122501757281,31.9336054898227,49.1596251627973,37.9408137142921,55.787899709872,49.3118399016988,43.2358097562111,48.2986588272389,30.3891809417107,28.8788688298171,44.4889164065238,40.4335573469452,44.9222664438974,5.6794644999888,7.93501381121248,4.63783181922684,0,0,0.539703191637817,0,0,3.93244376368905,1.36344258062446,1.81850203222008,2.82671659608272,4.92951969218382,2.56652954828636,10.1922095882658,7.11066703153331,0.865964164044856,0.760079596425296,0.505524445014783,1.7127581957859,2.07150306917737,4.45326417194474,4.3371331691534,3.65358573974569,1.61430848079241,2.26083960828934,3.99801604261396,3.14166478324189,0.741584903203122,1.59059292611903,0,3.23533699894818,2.65009822152472,2.90925151881133,0,18.1524094147159,18.0124167859571,0.255457055208591,0.599075622529601,0.599902730993408,1.01656181658452,26.9623150928681,34.7700458142156,72.1255981127842,45.7157962105687,39.6358958862012,25.973505569945,33.5839414550258,4.58277137326423,2.11491850037158,1.51633655060205,2.31486041475121,5.33493816147085,6.20735681970377,7.02242306240862,7.53524089178575,10.5456573684558,10.8896662242122,12.1812241927647,4.65666067330228,5.82033580918674,6.80781888604149,6.33424046990216,5.2606975782618,3.61461423993277,3.1342694986995,3.70407845534298,4.17971960318836,0,0.257347907114715,0.852490498186778,4.55676699578104,3.75241695969754,2.34080679899319,4.7348947117042,2.95146347621106,2.00547246753592,1.39520366850245,0.536546802799238,2.21854150497622,1.81015834904829,2.13417703302824,1.86458261955468,1.90059983652932,1.75640092232841,2.68412837520744,37.0110309472864,51.4523061896422,0,0.528901133327089,4.47905326123991,3.0190767341857,2.83508414908605,2.42020229548011,1.77902435075896,3.23383564391351,0.949058123089023,0.988193728344065,1.25667604400135,1.79060824837036,2.33956904542944,0,1.29682829924817,0.597423819763102,4.36236172192088,3.42745537829186,2.25415471346161,2.64746726198909,1.35766741017338,3.43665517462561,3.54124607895841,3.69025369949005,2.19798218977925,0.616985819609003,0.296452627087149,1.66845105716094,0.982794975566015,0,0.811440485554012,1.4470629585145,0.25462585178142,0.575392274901621,0.810676133875177,0.823684239564244,0,1.48856379067401,0.624075346229121,1.01031551178845,0.538192240565737,0.482443521363367,2.03228509183265,3.60033682363921,4.23708938749267,2.37643120085263,3.05097322775053,2.84760637651087,3.80869825417622,5.46374214001837,3.4679731703362,3.5434350343804,7.81328366421687,2.62181303545181,3.45369963731791,3.90552458170081,1.50791283939272,4.35124547054968,0.983528546038072,0.275936746304732,23.7614873181932,25.6693593636925,2.78689407140348,6.5642441073137,4.41711507182759,4.29482618726302,6.67812532971677,7.40803273652911,7.79795359288379,7.35998980050964,4.04810701674894,5.55286130031493,7.90575555893047,27.3123118958536,2.98074178937364,4.45164009168138,4.88660878060728,4.12425307431339,2.65490276679926,4.37005145078967,1.81394134178851,2.45186603682668,3.2483208216885,3.3817866273832,2.58428293168221,2.54473610634254,1.06949213515416,0.316036757935816,1.05418608574999,1.03135543248187,3.06395645178409,4.14140516272013,6.20921682157222,7.07312215604255,5.32020700926821,5.35106452806212,6.91105886528908,7.30715877875038,1.17335854031855,1.69465656691056,0.882113592219848,3.13283880588812,3.39075296061402,2.35220407219808,2.02932984805332,0.820704498725306,0.582961673259701,25.0324157714188,1.70870880797853,2.47664241555867,1.29636169158798,0.376736914009382,1.23024804948923,0.915112692826091,1.86976272993241,1.53946597556024,1.65839968565309,0,5.21954389408873,3.25311147402958,2.59212817972323,2.29997125615916,1.9652630737156,2.56242258131159,2.23164330458407,0.26175594198403,0.518459893167171,1.24267862617385,0.56369293868419,2.0932316446157,2.64733584731356,3.88902376688095,2.97067593998782,4.56181538825101,3.28600268208111,3.3853140059427,1.78260885523708,0,1.44015003128933,5.05617793005085,2.63542779877213,2.56777392912068,1.55904987573354,3.75956060901711,3.17890167650024,2.76449533895928,4.13530676088816,5.14928894735553,4.80102881926499,5.04130925684203,6.04238860586465,4.42574471545516,5.72696820689688,2.72076460338254,1.33191572024439,0.448569283047378,0.839423081820392,4.056981474676,2.25218970541418,3.29672923681077,1.71494703263253,2.50786052017682,54.7809287338555,58.4613050364115,54.9979692901821,56.8834033557606,52.7513540223395,40.0358765616541,51.9767325178491,53.137901980458,48.9393801702941,43.4918661871529,7.88783841639743,8.37952234142165,7.34154504742777,8.50873509739029,11.1094976192831,12.3175150661509,7.11189528965169,5.97501665992793,9.30665707816264,5.55933865880354,5.32306529769503,8.29955902098735,6.27398100048212,9.15559679389631,9.87890066036548,7.62069906052918,8.45955579397445,7.13764115715709,7.41754621445952,6.47675248591348,3.42869252385415,5.50174999093946,5.48403236878838,5.23247099876383,5.55245344450451,5.58456412085065,8.04883080640199,2.36762740294059,7.4692262615224,6.17256498823512,7.11810108745045,7.2893316957917,7.36615877705441,9.91595783590182,9.25951732709479,18.9856039232839,7.71974307869848,9.23945532407683,4.97349663378993,4.63241980150983,2.08681052058379|short_description=p2@Kif3c}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:16570 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O35066,uniprot:Q571A6 | |||
|association_with_transcript=11bp_to_ENSMUST00000020999,ENSMUST00000168012,NM_008445,uc007mwm.1,uc007mwn.1_5end | |||
|cluster_id=chr12:3365143..3365207,+ | |||
|description=CAGE_peak_2_at_Kif3c_5end | |||
|id=chr12:3365143..3365207,+ | |||
|ontology_enrichment_celltype=CL:0000221!2.00e-18!44;CL:0000133!2.00e-18!44;CL:0002319!2.03e-18!43;CL:0000540!4.07e-15!33;CL:0000047!4.07e-15!33;CL:0000031!4.07e-15!33;CL:0000404!4.07e-15!33;CL:0000055!7.36e-15!50;CL:0000117!1.28e-14!23;CL:0000337!1.28e-14!23;CL:0000393!1.47e-12!39;CL:0000211!1.47e-12!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.40e-18,44;CL:0000133,1.40e-18,44;CL:0002319,1.42e-18,43;CL:0000540,3.05e-15,33;CL:0000047,3.05e-15,33;CL:0000031,3.05e-15,33;CL:0000404,3.05e-15,33;CL:0000117,9.70e-15,23;CL:0000337,9.70e-15,23;CL:0000393,1.17e-12,39;CL:0000211,1.17e-12,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.57e-34!75;UBERON:0001016!2.57e-34!75;UBERON:0001017!9.34e-34!73;UBERON:0005743!9.34e-34!73;UBERON:0004121!9.42e-29!102;UBERON:0000924!9.42e-29!102;UBERON:0006601!9.42e-29!102;UBERON:0001049!3.48e-26!52;UBERON:0005068!3.48e-26!52;UBERON:0006241!3.48e-26!52;UBERON:0007135!3.48e-26!52;UBERON:0002346!8.58e-26!71;UBERON:0003075!8.58e-26!71;UBERON:0007284!8.58e-26!71;UBERON:0000033!4.08e-25!63;UBERON:0000955!7.86e-25!50;UBERON:0006238!7.86e-25!50;UBERON:0002616!2.71e-24!49;UBERON:0002020!2.44e-21!34;UBERON:0003056!4.44e-21!49;UBERON:0000153!4.53e-20!94;UBERON:0007811!8.12e-20!86;UBERON:0003080!9.52e-20!40;UBERON:0002780!3.04e-19!39;UBERON:0001890!3.04e-19!39;UBERON:0006240!3.04e-19!39;UBERON:0002791!2.40e-18!29;UBERON:0003528!2.40e-18!29;UBERON:0001893!2.40e-18!29;UBERON:0000956!1.16e-13!21;UBERON:0001869!1.16e-13!21;UBERON:0000203!1.16e-13!21;UBERON:0002619!5.32e-11!17;UBERON:0002021!1.31e-07!10;UBERON:0000411!1.31e-07!10;UBERON:0001950!1.31e-07!10;UBERON:0003076!5.82e-07!12;UBERON:0003057!5.82e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.27e-34,75;UBERON:0001017,4.68e-34,73;UBERON:0004121,1.02e-29,95;UBERON:0000924,1.02e-29,95;UBERON:0006601,1.02e-29,95;UBERON:0002346,5.40e-28,64;UBERON:0003075,5.40e-28,64;UBERON:0007284,5.40e-28,64;UBERON:0000073,9.40e-28,54;UBERON:0001049,2.06e-26,52;UBERON:0005068,2.06e-26,52;UBERON:0006241,2.06e-26,52;UBERON:0007135,2.06e-26,52;UBERON:0010371,2.87e-23,73;UBERON:0000955,3.15e-23,47;UBERON:0006238,3.15e-23,47;UBERON:0002616,1.08e-22,46;UBERON:0002020,1.60e-21,34;UBERON:0003056,2.93e-21,49;UBERON:0003080,6.46e-20,40;UBERON:0010314,1.25e-19,92;UBERON:0002780,2.08e-19,39;UBERON:0001890,2.08e-19,39;UBERON:0006240,2.08e-19,39;UBERON:0003528,1.68e-18,29;UBERON:0002791,1.68e-18,29;UBERON:0001893,1.68e-18,29;UBERON:0000956,8.98e-14,21;UBERON:0001869,8.98e-14,21;UBERON:0000203,8.98e-14,21;UBERON:0002619,4.35e-11,17;UBERON:0002021,1.15e-07,10;UBERON:0000411,1.15e-07,10;UBERON:0001950,1.15e-07,10;UBERON:0003076,5.18e-07,12;UBERON:0003057,5.18e-07,12 | |||
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| |||
|short_description=p2@Kif3c | |||
}} |
Revision as of 23:54, 4 August 2015
Short description: | p2@Kif3c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Kif3c_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 11bp_to_ENSMUST00000020999, ENSMUST00000168012, NM_008445, uc007mwm.1, uc007mwn.1_5end |
EntrezGene: | 16570 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.40e-18 | 44 |
neurectodermal cell | 1.40e-18 | 44 |
neural cell | 1.42e-18 | 43 |
neuron | 3.05e-15 | 33 |
neuronal stem cell | 3.05e-15 | 33 |
neuroblast | 3.05e-15 | 33 |
electrically signaling cell | 3.05e-15 | 33 |
CNS neuron (sensu Vertebrata) | 9.70e-15 | 23 |
neuroblast (sensu Vertebrata) | 9.70e-15 | 23 |
electrically responsive cell | 1.17e-12 | 39 |
electrically active cell | 1.17e-12 | 39 |