FFCP PHASE1:Mm9::chr12:3365108..3365142,+: Difference between revisions
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{{FFCP|EntrezGene=16570|HGNC=|MCL_coexpression_id=1|UniProt=O35066,Q571A6|association_with_transcript=0bp_to_ENSMUST00000020999,ENSMUST00000168012,NM_008445,uc007mwm.1,uc007mwn.1_5end|description=CAGE_peak_3_at_Kif3c_5end|id=chr12:3365108..3365142,+|ontology_enrichment_celltype=CL:0000221!1.76e-13!44;CL:0000133!1.76e-13!44;CL:0002319!3.35e-13!43;CL:0000117!4.25e-13!23;CL:0000337!4.25e-13!23;CL:0000055!8.86e-12!50;CL:0000540!3.63e-10!33;CL:0000047!3.63e-10!33;CL:0000031!3.63e-10!33;CL:0000404!3.63e-10!33;CL:0000393!1.23e-09!39;CL:0000211!1.23e-09!39|ontology_enrichment_celltype_v019_2=CL:0000221,3.96e-14,44;CL:0000133,3.96e-14,44;CL:0000117,5.84e-14,23;CL:0000337,5.84e-14,23;CL:0002319,7.92e-14,43;CL:0000540,1.42e-10,33;CL:0000047,1.42e-10,33;CL:0000031,1.42e-10,33;CL:0000404,1.42e-10,33;CL:0000393,9.16e-10,39;CL:0000211,9.16e-10,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.72e-29!75;UBERON:0001016!2.72e-29!75;UBERON:0001017!1.24e-28!73;UBERON:0005743!1.24e-28!73;UBERON:0004121!2.47e-28!102;UBERON:0000924!2.47e-28!102;UBERON:0006601!2.47e-28!102;UBERON:0001049!3.27e-25!52;UBERON:0005068!3.27e-25!52;UBERON:0006241!3.27e-25!52;UBERON:0007135!3.27e-25!52;UBERON:0000033!3.76e-25!63;UBERON:0000955!2.44e-24!50;UBERON:0006238!2.44e-24!50;UBERON:0002616!9.51e-24!49;UBERON:0002346!1.51e-23!71;UBERON:0003075!1.51e-23!71;UBERON:0007284!1.51e-23!71;UBERON:0003056!4.74e-19!49;UBERON:0002020!6.83e-19!34;UBERON:0003080!2.46e-18!40;UBERON:0002780!1.27e-17!39;UBERON:0001890!1.27e-17!39;UBERON:0006240!1.27e-17!39;UBERON:0007811!2.01e-16!86;UBERON:0002791!4.31e-16!29;UBERON:0003528!4.31e-16!29;UBERON:0001893!4.31e-16!29;UBERON:0000153!1.02e-15!94;UBERON:0000956!1.60e-11!21;UBERON:0001869!1.60e-11!21;UBERON:0000203!1.60e-11!21;UBERON:0004111!4.67e-10!122;UBERON:0002619!9.54e-10!17;UBERON:0000025!3.55e-09!114;UBERON:0003076!1.88e-07!12;UBERON:0003057!1.88e-07!12;UBERON:0002021!3.96e-07!10;UBERON:0000411!3.96e-07!10;UBERON:0001950!3.96e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.47e-31,75;UBERON:0001017,2.29e-30,73;UBERON:0004121,2.48e-30,95;UBERON:0000924,2.48e-30,95;UBERON:0006601,2.48e-30,95;UBERON:0000073,1.09e-28,54;UBERON:0001049,5.52e-27,52;UBERON:0005068,5.52e-27,52;UBERON:0006241,5.52e-27,52;UBERON:0007135,5.52e-27,52;UBERON:0002346,3.39e-26,64;UBERON:0003075,3.39e-26,64;UBERON:0007284,3.39e-26,64;UBERON:0010371,2.35e-24,73;UBERON:0000955,1.33e-23,47;UBERON:0006238,1.33e-23,47;UBERON:0002616,5.55e-23,46;UBERON:0010314,6.23e-21,92;UBERON:0002020,3.45e-20,34;UBERON:0003056,6.07e-20,49;UBERON:0003080,1.37e-19,40;UBERON:0002780,7.98e-19,39;UBERON:0001890,7.98e-19,39;UBERON:0006240,7.98e-19,39;UBERON:0003528,3.54e-17,29;UBERON:0002791,3.54e-17,29;UBERON:0001893,3.54e-17,29;UBERON:0000956,2.89e-12,21;UBERON:0001869,2.89e-12,21;UBERON:0000203,2.89e-12,21;UBERON:0004111,1.20e-10,122;UBERON:0002619,2.33e-10,17;UBERON:0000025,5.59e-10,114;UBERON:0003076,6.81e-08,12;UBERON:0003057,6.81e-08,12;UBERON:0002021,1.51e-07,10;UBERON:0000411,1.51e-07,10;UBERON:0001950,1.51e-07,10|phase1_expression=1.60148847104794,0,0,0,0,0.16787927191189,0,1.93684985162364,0.281577444303333,0.468129052643987,0.171217968225505,0.159544317990673,3.25281386869291,1.83582845079895,0.666219523631325,0.202475267389826,0,1.41957974411207,1.91960207048034,2.12194825899015,3.82694805679814,0.198581902401771,0.783599367416806,0,0,0,0,0,0,0.252030129759931,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0.683045484958446,0,1.88845226963366,0.912392380975631,0.367093504323363,2.34717403304412,3.48840250208714,3.29529274101708,3.69416808241138,2.37976916763116,5.75010257459886,1.51004345451963,0.725362142011344,0.336093799142464,1.80081605225163,2.0057340795713,3.6097046459421,7.68802551266472,7.93486468908049,8.87363964908651,1.35537812827653,0,2.6996991518442,1.97773272513395,6.3943210345149,3.29560121570245,3.07374644257244,5.18448061542388,3.51015439662396,4.41682418837902,10.8547374073445,10.6016899656774,3.06226998037385,4.50473713785711,7.35375029288017,26.4278114398533,18.8977260366078,20.8904885228491,7.91317726381163,5.39777097254217,6.77187381723788,21.7762739221077,11.8180148106653,15.279824777681,8.2496003932627,9.25415925194169,7.45597783301202,2.42323818666189,3.24957708459178,1.15945795480671,0,0,0.539703191637817,0.649776417447669,0,4.21333260395256,1.02258193546835,0.779358013808606,0.35333957451034,2.95771181531029,1.28326477414318,2.54805239706646,7.11066703153331,0.865964164044856,0.253359865475099,0.505524445014783,1.48439043634778,1.03575153458869,2.82040064223167,0.520455980298408,1.21786191324856,1.38369298353635,0.753613202763113,1.29347577849275,2.01066546127481,1.48316980640624,2.02439099687876,0.884610551949874,1.94120219936891,0.883366073841574,0.969750506270444,1.86391761218122,10.2473278954042,11.3101221679266,0.766371165625774,0.239630249011841,0.599902730993408,0.381210681219194,19.6225737620318,16.4700217014706,6.15706325353036,13.7321212951898,13.5529192385075,13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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:16570 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O35066,uniprot:Q571A6 | |||
|association_with_transcript=0bp_to_ENSMUST00000020999,ENSMUST00000168012,NM_008445,uc007mwm.1,uc007mwn.1_5end | |||
|cluster_id=chr12:3365108..3365142,+ | |||
|description=CAGE_peak_3_at_Kif3c_5end | |||
|id=chr12:3365108..3365142,+ | |||
|ontology_enrichment_celltype=CL:0000221!1.76e-13!44;CL:0000133!1.76e-13!44;CL:0002319!3.35e-13!43;CL:0000117!4.25e-13!23;CL:0000337!4.25e-13!23;CL:0000055!8.86e-12!50;CL:0000540!3.63e-10!33;CL:0000047!3.63e-10!33;CL:0000031!3.63e-10!33;CL:0000404!3.63e-10!33;CL:0000393!1.23e-09!39;CL:0000211!1.23e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.96e-14,44;CL:0000133,3.96e-14,44;CL:0000117,5.84e-14,23;CL:0000337,5.84e-14,23;CL:0002319,7.92e-14,43;CL:0000540,1.42e-10,33;CL:0000047,1.42e-10,33;CL:0000031,1.42e-10,33;CL:0000404,1.42e-10,33;CL:0000393,9.16e-10,39;CL:0000211,9.16e-10,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.72e-29!75;UBERON:0001016!2.72e-29!75;UBERON:0001017!1.24e-28!73;UBERON:0005743!1.24e-28!73;UBERON:0004121!2.47e-28!102;UBERON:0000924!2.47e-28!102;UBERON:0006601!2.47e-28!102;UBERON:0001049!3.27e-25!52;UBERON:0005068!3.27e-25!52;UBERON:0006241!3.27e-25!52;UBERON:0007135!3.27e-25!52;UBERON:0000033!3.76e-25!63;UBERON:0000955!2.44e-24!50;UBERON:0006238!2.44e-24!50;UBERON:0002616!9.51e-24!49;UBERON:0002346!1.51e-23!71;UBERON:0003075!1.51e-23!71;UBERON:0007284!1.51e-23!71;UBERON:0003056!4.74e-19!49;UBERON:0002020!6.83e-19!34;UBERON:0003080!2.46e-18!40;UBERON:0002780!1.27e-17!39;UBERON:0001890!1.27e-17!39;UBERON:0006240!1.27e-17!39;UBERON:0007811!2.01e-16!86;UBERON:0002791!4.31e-16!29;UBERON:0003528!4.31e-16!29;UBERON:0001893!4.31e-16!29;UBERON:0000153!1.02e-15!94;UBERON:0000956!1.60e-11!21;UBERON:0001869!1.60e-11!21;UBERON:0000203!1.60e-11!21;UBERON:0004111!4.67e-10!122;UBERON:0002619!9.54e-10!17;UBERON:0000025!3.55e-09!114;UBERON:0003076!1.88e-07!12;UBERON:0003057!1.88e-07!12;UBERON:0002021!3.96e-07!10;UBERON:0000411!3.96e-07!10;UBERON:0001950!3.96e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.47e-31,75;UBERON:0001017,2.29e-30,73;UBERON:0004121,2.48e-30,95;UBERON:0000924,2.48e-30,95;UBERON:0006601,2.48e-30,95;UBERON:0000073,1.09e-28,54;UBERON:0001049,5.52e-27,52;UBERON:0005068,5.52e-27,52;UBERON:0006241,5.52e-27,52;UBERON:0007135,5.52e-27,52;UBERON:0002346,3.39e-26,64;UBERON:0003075,3.39e-26,64;UBERON:0007284,3.39e-26,64;UBERON:0010371,2.35e-24,73;UBERON:0000955,1.33e-23,47;UBERON:0006238,1.33e-23,47;UBERON:0002616,5.55e-23,46;UBERON:0010314,6.23e-21,92;UBERON:0002020,3.45e-20,34;UBERON:0003056,6.07e-20,49;UBERON:0003080,1.37e-19,40;UBERON:0002780,7.98e-19,39;UBERON:0001890,7.98e-19,39;UBERON:0006240,7.98e-19,39;UBERON:0003528,3.54e-17,29;UBERON:0002791,3.54e-17,29;UBERON:0001893,3.54e-17,29;UBERON:0000956,2.89e-12,21;UBERON:0001869,2.89e-12,21;UBERON:0000203,2.89e-12,21;UBERON:0004111,1.20e-10,122;UBERON:0002619,2.33e-10,17;UBERON:0000025,5.59e-10,114;UBERON:0003076,6.81e-08,12;UBERON:0003057,6.81e-08,12;UBERON:0002021,1.51e-07,10;UBERON:0000411,1.51e-07,10;UBERON:0001950,1.51e-07,10 | |||
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| |||
|short_description=p3@Kif3c | |||
}} |
Revision as of 23:53, 4 August 2015
Short description: | p3@Kif3c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Kif3c_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000020999, ENSMUST00000168012, NM_008445, uc007mwm.1, uc007mwn.1_5end |
EntrezGene: | 16570 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.96e-14 | 44 |
neurectodermal cell | 3.96e-14 | 44 |
CNS neuron (sensu Vertebrata) | 5.84e-14 | 23 |
neuroblast (sensu Vertebrata) | 5.84e-14 | 23 |
neural cell | 7.92e-14 | 43 |
neuron | 1.42e-10 | 33 |
neuronal stem cell | 1.42e-10 | 33 |
neuroblast | 1.42e-10 | 33 |
electrically signaling cell | 1.42e-10 | 33 |
electrically responsive cell | 9.16e-10 | 39 |
electrically active cell | 9.16e-10 | 39 |