FFCP PHASE1:Mm9::chr6:117124131..117124144,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=134|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:117124131..117124144,+|id=chr6:117124131..117124144,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000192,2.33e-17,3;CL:0000359,2.33e-17,3;CL:0002539,2.33e-17,3;CL:0000514,2.33e-17,3;CL:0000680,3.47e-09,6;CL:0000187,3.47e-09,6;CL:0000056,3.47e-09,6;CL:0000222,5.24e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001135,2.33e-17,3;UBERON:0004237,2.33e-17,3;UBERON:0004695,2.33e-17,3;UBERON:0002111,2.33e-17,3;UBERON:0004178,2.33e-17,3;UBERON:0000947,2.76e-13,4;UBERON:0001637,2.76e-13,4;UBERON:0004573,2.76e-13,4;UBERON:0003509,2.76e-13,4;UBERON:0004571,2.76e-13,4;UBERON:0010191,2.76e-13,4;UBERON:0004572,2.76e-13,4;UBERON:0000055,7.88e-11,5;UBERON:0007500,7.88e-11,5;UBERON:0001981,7.88e-11,5;UBERON:0002049,7.88e-11,5;UBERON:0007798,7.88e-11,5;UBERON:0004537,7.88e-11,5;UBERON:0006965,7.88e-11,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,0.912392380975631,1.83546752161682,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0.898800331555214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0.860423876981386,0,0,1.29955283489534,0,0.140444420131752,9.20323741921512,9.87186817490901,3.18005617059306,0.14084341977668,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0.101839363850316,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0.234526059981096,0.36012412292203,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.140271639780637,0,0,0.156998727841375,0.246794327843601,0.296452627087149,0,0,0,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0,1.43768206527355,0.372140947668503,0.624075346229121,0.252578877947112,0,0,0.184753190166605,0.189491411770485,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0.164549020602121,0,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0.291480836629851,0,0,0,0.370389054739423,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,0,0.158167996790568,0,0,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0.258319646955462,0.337912250981556,0.469428954583016,0.13020438484395,0.104859344425711,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0,0.399024873401031,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0.177475806159338,0.238436189947321,0,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p@chr6:117124131..117124144,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=134 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:117124131..117124144,+ | |||
|description=CAGE_peak_at_chr6:117124131..117124144,+ | |||
|id=chr6:117124131..117124144,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,2.33e-17,3;CL:0000359,2.33e-17,3;CL:0002539,2.33e-17,3;CL:0000514,2.33e-17,3;CL:0000680,3.47e-09,6;CL:0000187,3.47e-09,6;CL:0000056,3.47e-09,6;CL:0000222,5.24e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,2.33e-17,3;UBERON:0004237,2.33e-17,3;UBERON:0004695,2.33e-17,3;UBERON:0002111,2.33e-17,3;UBERON:0004178,2.33e-17,3;UBERON:0000947,2.76e-13,4;UBERON:0001637,2.76e-13,4;UBERON:0004573,2.76e-13,4;UBERON:0003509,2.76e-13,4;UBERON:0004571,2.76e-13,4;UBERON:0010191,2.76e-13,4;UBERON:0004572,2.76e-13,4;UBERON:0000055,7.88e-11,5;UBERON:0007500,7.88e-11,5;UBERON:0001981,7.88e-11,5;UBERON:0002049,7.88e-11,5;UBERON:0007798,7.88e-11,5;UBERON:0004537,7.88e-11,5;UBERON:0006965,7.88e-11,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,0.912392380975631,1.83546752161682,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0.898800331555214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0.860423876981386,0,0,1.29955283489534,0,0.140444420131752,9.20323741921512,9.87186817490901,3.18005617059306,0.14084341977668,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0.101839363850316,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0.234526059981096,0.36012412292203,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.140271639780637,0,0,0.156998727841375,0.246794327843601,0.296452627087149,0,0,0,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0,1.43768206527355,0.372140947668503,0.624075346229121,0.252578877947112,0,0,0.184753190166605,0.189491411770485,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0.164549020602121,0,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0.291480836629851,0,0,0,0.370389054739423,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,0,0.158167996790568,0,0,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0.258319646955462,0.337912250981556,0.469428954583016,0.13020438484395,0.104859344425711,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0,0.399024873401031,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0.177475806159338,0.238436189947321,0,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr6:117124131..117124144,+ | |||
}} |
Latest revision as of 23:37, 4 August 2015
Short description: | p@chr6:117124131..117124144, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:117124131..117124144, + |
Coexpression cluster: | MCL_coexpression_mm9:134 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 2.33e-17 | 3 |
vascular associated smooth muscle cell | 2.33e-17 | 3 |
aortic smooth muscle cell | 2.33e-17 | 3 |
smooth muscle myoblast | 2.33e-17 | 3 |
muscle precursor cell | 3.47e-09 | 6 |
muscle cell | 3.47e-09 | 6 |
myoblast | 3.47e-09 | 6 |
mesodermal cell | 5.24e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 2.33e-17 | 3 |
blood vessel smooth muscle | 2.33e-17 | 3 |
arterial system smooth muscle | 2.33e-17 | 3 |
artery smooth muscle tissue | 2.33e-17 | 3 |
aorta smooth muscle tissue | 2.33e-17 | 3 |
aorta | 2.76e-13 | 4 |
artery | 2.76e-13 | 4 |
systemic artery | 2.76e-13 | 4 |
arterial blood vessel | 2.76e-13 | 4 |
systemic arterial system | 2.76e-13 | 4 |
aortic system | 2.76e-13 | 4 |
arterial system | 2.76e-13 | 4 |
vessel | 7.88e-11 | 5 |
epithelial tube open at both ends | 7.88e-11 | 5 |
blood vessel | 7.88e-11 | 5 |
vasculature | 7.88e-11 | 5 |
vascular system | 7.88e-11 | 5 |
blood vasculature | 7.88e-11 | 5 |
vascular cord | 7.88e-11 | 5 |