FFCP PHASE1:Mm9::chr9:28211123..28211137,+: Difference between revisions
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{{FFCP|EntrezGene=330908|HGNC=|MCL_coexpression_id=2|UniProt=G5E8G3|association_with_transcript=-244bp_to_ENSMUST00000073822_5end|description=CAGE_peak_7_at_Opcml_5end|id=chr9:28211123..28211137,+|ontology_enrichment_celltype=CL:0000117!4.17e-13!23;CL:0000337!4.17e-13!23;CL:0000540!5.39e-07!33;CL:0000047!5.39e-07!33;CL:0000031!5.39e-07!33;CL:0000404!5.39e-07!33|ontology_enrichment_celltype_v019_2=CL:0002614,4.87e-09,3;CL:0002610,5.54e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.79e-23!52;UBERON:0005068!2.79e-23!52;UBERON:0006241!2.79e-23!52;UBERON:0007135!2.79e-23!52;UBERON:0000955!3.07e-22!50;UBERON:0006238!3.07e-22!50;UBERON:0002616!2.51e-21!49;UBERON:0000033!8.29e-20!63;UBERON:0002020!2.04e-19!34;UBERON:0001017!1.37e-18!73;UBERON:0005743!1.37e-18!73;UBERON:0000073!1.54e-18!75;UBERON:0001016!1.54e-18!75;UBERON:0002346!1.34e-17!71;UBERON:0003075!1.34e-17!71;UBERON:0007284!1.34e-17!71;UBERON:0003056!5.84e-17!49;UBERON:0003080!6.72e-17!40;UBERON:0007811!8.86e-17!86;UBERON:0002780!4.32e-16!39;UBERON:0001890!4.32e-16!39;UBERON:0006240!4.32e-16!39;UBERON:0000153!5.35e-16!94;UBERON:0002791!8.36e-16!29;UBERON:0003528!8.36e-16!29;UBERON:0001893!8.36e-16!29;UBERON:0004121!8.57e-14!102;UBERON:0000924!8.57e-14!102;UBERON:0006601!8.57e-14!102;UBERON:0000956!3.26e-12!21;UBERON:0001869!3.26e-12!21;UBERON:0000203!3.26e-12!21;UBERON:0002619!1.80e-11!17;UBERON:0002021!1.84e-11!10;UBERON:0000411!1.84e-11!10;UBERON:0001950!1.84e-11!10;UBERON:0003076!4.82e-07!12;UBERON:0003057!4.82e-07!12;UBERON:0000025!6.35e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0002021,7.01e-31,10;UBERON:0000411,7.01e-31,10;UBERON:0001950,7.01e-31,10;UBERON:0000073,2.15e-27,54;UBERON:0000955,7.64e-27,47;UBERON:0006238,7.64e-27,47;UBERON:0002616,7.77e-25,46;UBERON:0001017,9.65e-25,73;UBERON:0001016,6.09e-24,75;UBERON:0001049,1.15e-23,52;UBERON:0005068,1.15e-23,52;UBERON:0006241,1.15e-23,52;UBERON:0007135,1.15e-23,52;UBERON:0003080,1.09e-18,40;UBERON:0002346,2.37e-18,64;UBERON:0003075,2.37e-18,64;UBERON:0007284,2.37e-18,64;UBERON:0003528,2.67e-18,29;UBERON:0002791,2.67e-18,29;UBERON:0001893,2.67e-18,29;UBERON:0004121,8.70e-18,95;UBERON:0000924,8.70e-18,95;UBERON:0006601,8.70e-18,95;UBERON:0002619,2.45e-17,17;UBERON:0002780,5.51e-17,39;UBERON:0001890,5.51e-17,39;UBERON:0006240,5.51e-17,39;UBERON:0000956,1.73e-16,21;UBERON:0001869,1.73e-16,21;UBERON:0000203,1.73e-16,21;UBERON:0010371,1.64e-15,73;UBERON:0002020,3.70e-15,34;UBERON:0003056,1.44e-14,49;UBERON:0002950,1.80e-11,4;UBERON:0001891,1.80e-11,4;UBERON:0009616,1.80e-11,4;UBERON:0010286,1.80e-11,4;UBERON:0010314,2.44e-11,92;UBERON:0000025,2.99e-10,114;UBERON:0004111,3.00e-09,122;UBERON:0002038,4.87e-09,3;UBERON:0009663,4.87e-09,3;UBERON:0009661,4.87e-09,3;UBERON:0000125,4.87e-09,3;UBERON:0002308,4.87e-09,3;UBERON:0004684,5.54e-09,3;UBERON:0002275,5.54e-09,3;UBERON:0004733,8.73e-08,6;UBERON:0004732,8.73e-08,6;UBERON:0002028,8.73e-08,6;UBERON:0007277,8.73e-08,6;UBERON:0011216,2.01e-07,194|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0.202316460859598,1.05798195854407,0,0,0,0,0,0,0,0,0.103689612308478,0.675029691658453,0,0.856952953211411,0.662605622854841,0.489963196859816,0.191690942036473,0.919218786610021,1.10115880999389,2.42605942361857,2.91852413186863,0.659431438650969,0.274462930807229,0.52091337055676,1.95428099300967,2.8138130501584,1.83357897332172,0.883885756421003,0.569486723196412,0.931997229126503,0,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0.220841518460394,0,0,4.68449275218475,5.44561437714983,0,0,0,0,1.9472783122627,0,0.125654352112864,3.30266208365325,4.60287823194595,2.90903262383384,2.27137768294861,0,0,0,0,0,0,0,0.150704817835715,0.408218994907967,0.384341160854549,0.562210347358373,0.517406741478031,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0.339490171550376,0.234690248288502,1.17254380209271,0.238043640886014,0,0.945810864637146,1.10732344824387,0.318909537314974,0,0,0,0,0,0,0,1.76605648986571,1.05490517932983,0,0,0,0,0,0,0,0,0,0,0,3.85585579706168,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0.18006109403131,0,0.428674070063185,0.177340233642274,0,0.329098041204242,0,0,0,0.220528398054962,0,0.161464426695906,0.0603129249281559,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0,0,0,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0.51968329191118,0.179026695667481,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0.233753804363138,0,0,0,0,0,0,0.183151624267265,0,0,12.9892923801925,8.28585425712918,13.1765968091061,16.1541991403066,7.53590771747707,12.0863023582352,8.10027000278167,8.55610286126019,6.79713613476307,9.83744592328458,0.103787347584177,0,0,0.243106717068294,0,0.551530525350042,0,0,0.320919209591815,0,0.25347929989024,0.188626341386076,0.37456602987953,0.384150914429216,0.0574354689556133,0.952587382566147,0.115884325944855,0.192909220463705,0.824171801606613,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,0,0.282328141245992,0.25384382367503,0,0,0.407412341537585,0,0.237270036248348,0.394017929502254,0.409231043169689,0,0,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p7@Opcml}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:330908 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G5E8G3 | |||
|association_with_transcript=-244bp_to_ENSMUST00000073822_5end | |||
|cluster_id=chr9:28211123..28211137,+ | |||
|description=CAGE_peak_7_at_Opcml_5end | |||
|id=chr9:28211123..28211137,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.17e-13!23;CL:0000337!4.17e-13!23;CL:0000540!5.39e-07!33;CL:0000047!5.39e-07!33;CL:0000031!5.39e-07!33;CL:0000404!5.39e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,4.87e-09,3;CL:0002610,5.54e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.79e-23!52;UBERON:0005068!2.79e-23!52;UBERON:0006241!2.79e-23!52;UBERON:0007135!2.79e-23!52;UBERON:0000955!3.07e-22!50;UBERON:0006238!3.07e-22!50;UBERON:0002616!2.51e-21!49;UBERON:0000033!8.29e-20!63;UBERON:0002020!2.04e-19!34;UBERON:0001017!1.37e-18!73;UBERON:0005743!1.37e-18!73;UBERON:0000073!1.54e-18!75;UBERON:0001016!1.54e-18!75;UBERON:0002346!1.34e-17!71;UBERON:0003075!1.34e-17!71;UBERON:0007284!1.34e-17!71;UBERON:0003056!5.84e-17!49;UBERON:0003080!6.72e-17!40;UBERON:0007811!8.86e-17!86;UBERON:0002780!4.32e-16!39;UBERON:0001890!4.32e-16!39;UBERON:0006240!4.32e-16!39;UBERON:0000153!5.35e-16!94;UBERON:0002791!8.36e-16!29;UBERON:0003528!8.36e-16!29;UBERON:0001893!8.36e-16!29;UBERON:0004121!8.57e-14!102;UBERON:0000924!8.57e-14!102;UBERON:0006601!8.57e-14!102;UBERON:0000956!3.26e-12!21;UBERON:0001869!3.26e-12!21;UBERON:0000203!3.26e-12!21;UBERON:0002619!1.80e-11!17;UBERON:0002021!1.84e-11!10;UBERON:0000411!1.84e-11!10;UBERON:0001950!1.84e-11!10;UBERON:0003076!4.82e-07!12;UBERON:0003057!4.82e-07!12;UBERON:0000025!6.35e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,7.01e-31,10;UBERON:0000411,7.01e-31,10;UBERON:0001950,7.01e-31,10;UBERON:0000073,2.15e-27,54;UBERON:0000955,7.64e-27,47;UBERON:0006238,7.64e-27,47;UBERON:0002616,7.77e-25,46;UBERON:0001017,9.65e-25,73;UBERON:0001016,6.09e-24,75;UBERON:0001049,1.15e-23,52;UBERON:0005068,1.15e-23,52;UBERON:0006241,1.15e-23,52;UBERON:0007135,1.15e-23,52;UBERON:0003080,1.09e-18,40;UBERON:0002346,2.37e-18,64;UBERON:0003075,2.37e-18,64;UBERON:0007284,2.37e-18,64;UBERON:0003528,2.67e-18,29;UBERON:0002791,2.67e-18,29;UBERON:0001893,2.67e-18,29;UBERON:0004121,8.70e-18,95;UBERON:0000924,8.70e-18,95;UBERON:0006601,8.70e-18,95;UBERON:0002619,2.45e-17,17;UBERON:0002780,5.51e-17,39;UBERON:0001890,5.51e-17,39;UBERON:0006240,5.51e-17,39;UBERON:0000956,1.73e-16,21;UBERON:0001869,1.73e-16,21;UBERON:0000203,1.73e-16,21;UBERON:0010371,1.64e-15,73;UBERON:0002020,3.70e-15,34;UBERON:0003056,1.44e-14,49;UBERON:0002950,1.80e-11,4;UBERON:0001891,1.80e-11,4;UBERON:0009616,1.80e-11,4;UBERON:0010286,1.80e-11,4;UBERON:0010314,2.44e-11,92;UBERON:0000025,2.99e-10,114;UBERON:0004111,3.00e-09,122;UBERON:0002038,4.87e-09,3;UBERON:0009663,4.87e-09,3;UBERON:0009661,4.87e-09,3;UBERON:0000125,4.87e-09,3;UBERON:0002308,4.87e-09,3;UBERON:0004684,5.54e-09,3;UBERON:0002275,5.54e-09,3;UBERON:0004733,8.73e-08,6;UBERON:0004732,8.73e-08,6;UBERON:0002028,8.73e-08,6;UBERON:0007277,8.73e-08,6;UBERON:0011216,2.01e-07,194 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0.202316460859598,1.05798195854407,0,0,0,0,0,0,0,0,0.103689612308478,0.675029691658453,0,0.856952953211411,0.662605622854841,0.489963196859816,0.191690942036473,0.919218786610021,1.10115880999389,2.42605942361857,2.91852413186863,0.659431438650969,0.274462930807229,0.52091337055676,1.95428099300967,2.8138130501584,1.83357897332172,0.883885756421003,0.569486723196412,0.931997229126503,0,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0.220841518460394,0,0,4.68449275218475,5.44561437714983,0,0,0,0,1.9472783122627,0,0.125654352112864,3.30266208365325,4.60287823194595,2.90903262383384,2.27137768294861,0,0,0,0,0,0,0,0.150704817835715,0.408218994907967,0.384341160854549,0.562210347358373,0.517406741478031,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0.339490171550376,0.234690248288502,1.17254380209271,0.238043640886014,0,0.945810864637146,1.10732344824387,0.318909537314974,0,0,0,0,0,0,0,1.76605648986571,1.05490517932983,0,0,0,0,0,0,0,0,0,0,0,3.85585579706168,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0.18006109403131,0,0.428674070063185,0.177340233642274,0,0.329098041204242,0,0,0,0.220528398054962,0,0.161464426695906,0.0603129249281559,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0,0,0,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0.51968329191118,0.179026695667481,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0.233753804363138,0,0,0,0,0,0,0.183151624267265,0,0,12.9892923801925,8.28585425712918,13.1765968091061,16.1541991403066,7.53590771747707,12.0863023582352,8.10027000278167,8.55610286126019,6.79713613476307,9.83744592328458,0.103787347584177,0,0,0.243106717068294,0,0.551530525350042,0,0,0.320919209591815,0,0.25347929989024,0.188626341386076,0.37456602987953,0.384150914429216,0.0574354689556133,0.952587382566147,0.115884325944855,0.192909220463705,0.824171801606613,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,0,0.282328141245992,0.25384382367503,0,0,0.407412341537585,0,0.237270036248348,0.394017929502254,0.409231043169689,0,0,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p7@Opcml | |||
}} |
Revision as of 23:21, 4 August 2015
Short description: | p7@Opcml |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Opcml_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | -244bp_to_ENSMUST00000073822_5end |
EntrezGene: | 330908 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 4.87e-09 | 3 |
raphe nuclei neuron | 5.54e-09 | 3 |