FFCP PHASE1:Mm9::chr17:37095120..37095143,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:37095120..37095143,-|id=chr17:37095120..37095143,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000333,6.36e-13,10;CL:0000095,6.36e-13,10;CL:0000243,6.36e-13,10;CL:0000123,6.36e-13,10;CL:0000125,6.36e-13,10;CL:0000030,6.36e-13,10;CL:0000339,6.36e-13,10;CL:0000128,3.85e-10,6;CL:0000126,3.85e-10,6;CL:0000127,3.85e-10,6;CL:0002453,4.95e-10,8;CL:0000680,4.67e-07,6;CL:0000187,4.67e-07,6;CL:0000056,4.67e-07,6;CL:0002293,7.26e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.24e-09!75;UBERON:0001016!3.24e-09!75;UBERON:0001017!2.16e-08!73;UBERON:0005743!2.16e-08!73;UBERON:0002616!4.80e-08!49;UBERON:0002021!1.07e-07!10;UBERON:0000411!1.07e-07!10;UBERON:0001950!1.07e-07!10;UBERON:0002619!1.65e-07!17;UBERON:0000955!1.67e-07!50;UBERON:0006238!1.67e-07!50;UBERON:0001049!3.60e-07!52;UBERON:0005068!3.60e-07!52;UBERON:0006241!3.60e-07!52;UBERON:0007135!3.60e-07!52;UBERON:0000956!5.77e-07!21;UBERON:0001869!5.77e-07!21;UBERON:0000203!5.77e-07!21;UBERON:0004121!7.54e-07!102;UBERON:0000924!7.54e-07!102;UBERON:0006601!7.54e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0002021,7.31e-19,10;UBERON:0000411,7.31e-19,10;UBERON:0001950,7.31e-19,10;UBERON:0002619,4.53e-17,17;UBERON:0000956,1.64e-15,21;UBERON:0001869,1.64e-15,21;UBERON:0000203,1.64e-15,21;UBERON:0003528,7.38e-12,29;UBERON:0002791,7.38e-12,29;UBERON:0001893,7.38e-12,29;UBERON:0002616,1.58e-10,46;UBERON:0002780,2.68e-10,39;UBERON:0001890,2.68e-10,39;UBERON:0006240,2.68e-10,39;UBERON:0000955,3.35e-10,47;UBERON:0006238,3.35e-10,47;UBERON:0003080,6.20e-10,40;UBERON:0002020,1.47e-09,34;UBERON:0001049,9.16e-09,52;UBERON:0005068,9.16e-09,52;UBERON:0006241,9.16e-09,52;UBERON:0007135,9.16e-09,52;UBERON:0001016,1.34e-08,75;UBERON:0000073,2.88e-08,54;UBERON:0003056,2.39e-07,49;UBERON:0001017,3.45e-07,73;UBERON:0000947,9.59e-07,4;UBERON:0001637,9.59e-07,4;UBERON:0004573,9.59e-07,4;UBERON:0003509,9.59e-07,4;UBERON:0004571,9.59e-07,4;UBERON:0010191,9.59e-07,4;UBERON:0004572,9.59e-07,4|phase1_expression=0.640595388419176,0,0,0.30246421130683,0.500895729946347,0.16787927191189,0.233612640595526,0,0.140788722151667,0.468129052643987,0,0,0.171200729931206,0,0,0.202475267389826,0,0.157731082679119,0,0,0.595303031057488,0,0.261199789138935,0.159992422793407,0.22940928106717,0.57423196411502,0.86152399231815,0.215471232685889,0.190023419456374,0.252030129759931,0.443461021310609,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,1.25896817975577,1.92616169317078,1.28482726513177,3.12956537739216,1.52617609466313,1.5378032791413,1.74986909166855,1.39986421625363,1.43752564364972,0,0,0,4.3734104126111,1.14613375975503,0.515672092277442,0.404632921719196,0.528990979272033,0,2.37191172448392,0,0.899899717281399,1.97773272513395,0,0.898800331555214,1.92109152660777,0.311068836925433,0.135005938331691,0.210324961351382,0.571301968807607,0.441737081903227,0.244981598429908,0.287536413054709,0,0,0.893811366596314,0.768032666281217,0.263772575460388,0.182975287204819,0,0.837548997004143,0.56276261003168,0.45839474333043,0.294628585473668,0,0,2.42323818666189,1.43585964202892,0.579728977403356,0,4.75979933595425,1.61910957491345,0.649776417447669,0.448026887097336,0.421333260395256,5.45377032249785,5.71529210126311,4.24007489412408,0.14084341977668,2.56652954828636,2.54805239706646,7.11066703153331,0,1.01343946190039,1.01104889002957,0.5709193985953,0.258937883647172,0.593768556259299,0,0.304465478312141,0,0,0.23517741427141,0.502666365318702,0.247194967734374,1.15679485535929,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0.83778682725382,0.255457055208591,0.239630249011841,0.599902730993408,0.381210681219194,0.299581278809645,1.83000241127451,0.125654352112864,3.12883776346098,3.83573185995496,0.83115217823824,0.324482526135515,0.407357455401265,0.622034853050465,0.505445516867349,0.210441855886474,0.260240885925407,0,0.180062129805349,0.452114453507145,0.204109497453984,0.384341160854549,0.562210347358373,0,0,0.567318240503458,0.175951124163949,0.43839146485515,0.556094498451196,0.696504333044333,0.823128545631774,0.199034266818493,0,0.257347907114715,0.284163499395593,0,0.234526059981096,0.180062061461015,0.473489471170421,0,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0.32833492815819,0.162137619091711,0.292399974850665,0,0.134206418760372,2.52347938276953,0.617427674275707,0,0,0,0.464473343720877,0.515469845288373,0,0,0,0,0.329397909448022,0.502670417600539,0,0,0,0.216138049874694,0,0.569003702859245,0,0,0,0,0.0701358198903186,0.126473074248515,0,0.156998727841375,0.493588655687202,4.44678940630723,0,0,0.224862112384854,0,0,0.50925170356284,0.287696137450811,0.486405680325106,0.823684239564244,0,0.744281895337007,0.312037673114561,0.757736633841335,0.896987067609561,0.482443521363367,0.184753190166605,0.37898282354097,0.651859905768103,0.678980343100753,0.234690248288502,0.335012514883631,0,0.585400943573396,0.157635144106191,0,0,0,0.172684981865896,0.144649058581512,0,0.54390568381871,1.96705709207614,0,0.642202359951168,0.234423373184406,0.983609672260053,0.504941854408746,0.315508219416257,0.780877488593277,0.861693590931196,0.716906393857656,0.222798674082394,0.566153061577665,0,0,0.395287777946524,0,0.709700426041343,0.35613120733451,0.488660878060728,0,1.32745138339963,0.242780636154981,0,0.188605079755898,0,0.922305443831782,0.258428293168221,0,0.356497378384721,0,0,0,1.36175842301515,0.18006109403131,0.129358683782755,0.214337035031592,0.886701168211368,0.178368817602071,0.329098041204242,1.8267896946876,2.81606049676452,0.63549621259146,0.441056796109924,0.49465875882444,0.484393280087717,0.542816324353403,0.238744688006273,0.328281799490123,0,0.370850604021019,0.170870880797853,0,0,0.188368457004691,0,0.228778173206523,1.01987057996313,0.559805809294632,0.552799895217695,0,0.316335993581135,0,0.108005340821801,0,0.218362563746178,0.674321731924103,0.165306911450672,0,0.259229946583586,0,0.56369293868419,0.299033092087958,0.330916980914195,0,0.129159823477731,0,0.234714477291508,0.13020438484395,0.104859344425711,0,0,0,0.405450430580328,0.308132871494482,0.25984164595559,0,0,0,0,0,0,0,0.194915761479505,0,0,0,0.443971906748129,0.269141569828427,0.167884616364078,0,1.50145980360946,0.549454872801795,0.428736758158132,0,2.25900737046827,3.22227665555024,2.86447756719698,4.98374228796694,1.37016503954128,7.55393897389701,4.05013500139084,2.2516060161211,4.98456649882625,4.14208249401456,0.103787347584177,0,0.170733605754134,0.729320151204882,0.419226325255965,0.183843508450014,0.44449345560323,0.206035057238894,0.320919209591815,0.758091635291392,0.25347929989024,0.188626341386076,0.37456602987953,0.448176066834085,0.17230640686684,0.952587382566147,0.115884325944855,0.578727661391115,0,0.588795680537589,1.02860775715625,0.177475806159338,0.715308569841963,0,0.752875043322645,0.169229215783353,0.182927972872773,0,0.407412341537585,0,0.237270036248348,0,0.409231043169689,0.154936841185966,0.578719832943424,0,0.233931608445408,0.859484216193193,0.765153328275374,0.441182838239031,0.463735671240843|short_description=p@chr17:37095120..37095143,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:37095120..37095143,- | |||
|description=CAGE_peak_at_chr17:37095120..37095143,- | |||
|id=chr17:37095120..37095143,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,6.36e-13,10;CL:0000095,6.36e-13,10;CL:0000243,6.36e-13,10;CL:0000123,6.36e-13,10;CL:0000125,6.36e-13,10;CL:0000030,6.36e-13,10;CL:0000339,6.36e-13,10;CL:0000128,3.85e-10,6;CL:0000126,3.85e-10,6;CL:0000127,3.85e-10,6;CL:0002453,4.95e-10,8;CL:0000680,4.67e-07,6;CL:0000187,4.67e-07,6;CL:0000056,4.67e-07,6;CL:0002293,7.26e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.24e-09!75;UBERON:0001016!3.24e-09!75;UBERON:0001017!2.16e-08!73;UBERON:0005743!2.16e-08!73;UBERON:0002616!4.80e-08!49;UBERON:0002021!1.07e-07!10;UBERON:0000411!1.07e-07!10;UBERON:0001950!1.07e-07!10;UBERON:0002619!1.65e-07!17;UBERON:0000955!1.67e-07!50;UBERON:0006238!1.67e-07!50;UBERON:0001049!3.60e-07!52;UBERON:0005068!3.60e-07!52;UBERON:0006241!3.60e-07!52;UBERON:0007135!3.60e-07!52;UBERON:0000956!5.77e-07!21;UBERON:0001869!5.77e-07!21;UBERON:0000203!5.77e-07!21;UBERON:0004121!7.54e-07!102;UBERON:0000924!7.54e-07!102;UBERON:0006601!7.54e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,7.31e-19,10;UBERON:0000411,7.31e-19,10;UBERON:0001950,7.31e-19,10;UBERON:0002619,4.53e-17,17;UBERON:0000956,1.64e-15,21;UBERON:0001869,1.64e-15,21;UBERON:0000203,1.64e-15,21;UBERON:0003528,7.38e-12,29;UBERON:0002791,7.38e-12,29;UBERON:0001893,7.38e-12,29;UBERON:0002616,1.58e-10,46;UBERON:0002780,2.68e-10,39;UBERON:0001890,2.68e-10,39;UBERON:0006240,2.68e-10,39;UBERON:0000955,3.35e-10,47;UBERON:0006238,3.35e-10,47;UBERON:0003080,6.20e-10,40;UBERON:0002020,1.47e-09,34;UBERON:0001049,9.16e-09,52;UBERON:0005068,9.16e-09,52;UBERON:0006241,9.16e-09,52;UBERON:0007135,9.16e-09,52;UBERON:0001016,1.34e-08,75;UBERON:0000073,2.88e-08,54;UBERON:0003056,2.39e-07,49;UBERON:0001017,3.45e-07,73;UBERON:0000947,9.59e-07,4;UBERON:0001637,9.59e-07,4;UBERON:0004573,9.59e-07,4;UBERON:0003509,9.59e-07,4;UBERON:0004571,9.59e-07,4;UBERON:0010191,9.59e-07,4;UBERON:0004572,9.59e-07,4 | |||
|phase1_expression=0.640595388419176,0,0,0.30246421130683,0.500895729946347,0.16787927191189,0.233612640595526,0,0.140788722151667,0.468129052643987,0,0,0.171200729931206,0,0,0.202475267389826,0,0.157731082679119,0,0,0.595303031057488,0,0.261199789138935,0.159992422793407,0.22940928106717,0.57423196411502,0.86152399231815,0.215471232685889,0.190023419456374,0.252030129759931,0.443461021310609,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,1.25896817975577,1.92616169317078,1.28482726513177,3.12956537739216,1.52617609466313,1.5378032791413,1.74986909166855,1.39986421625363,1.43752564364972,0,0,0,4.3734104126111,1.14613375975503,0.515672092277442,0.404632921719196,0.528990979272033,0,2.37191172448392,0,0.899899717281399,1.97773272513395,0,0.898800331555214,1.92109152660777,0.311068836925433,0.135005938331691,0.210324961351382,0.571301968807607,0.441737081903227,0.244981598429908,0.287536413054709,0,0,0.893811366596314,0.768032666281217,0.263772575460388,0.182975287204819,0,0.837548997004143,0.56276261003168,0.45839474333043,0.294628585473668,0,0,2.42323818666189,1.43585964202892,0.579728977403356,0,4.75979933595425,1.61910957491345,0.649776417447669,0.448026887097336,0.421333260395256,5.45377032249785,5.71529210126311,4.24007489412408,0.14084341977668,2.56652954828636,2.54805239706646,7.11066703153331,0,1.01343946190039,1.01104889002957,0.5709193985953,0.258937883647172,0.593768556259299,0,0.304465478312141,0,0,0.23517741427141,0.502666365318702,0.247194967734374,1.15679485535929,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0.83778682725382,0.255457055208591,0.239630249011841,0.599902730993408,0.381210681219194,0.299581278809645,1.83000241127451,0.125654352112864,3.12883776346098,3.83573185995496,0.83115217823824,0.324482526135515,0.407357455401265,0.622034853050465,0.505445516867349,0.210441855886474,0.260240885925407,0,0.180062129805349,0.452114453507145,0.204109497453984,0.384341160854549,0.562210347358373,0,0,0.567318240503458,0.175951124163949,0.43839146485515,0.556094498451196,0.696504333044333,0.823128545631774,0.199034266818493,0,0.257347907114715,0.284163499395593,0,0.234526059981096,0.180062061461015,0.473489471170421,0,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0.32833492815819,0.162137619091711,0.292399974850665,0,0.134206418760372,2.52347938276953,0.617427674275707,0,0,0,0.464473343720877,0.515469845288373,0,0,0,0,0.329397909448022,0.502670417600539,0,0,0,0.216138049874694,0,0.569003702859245,0,0,0,0,0.0701358198903186,0.126473074248515,0,0.156998727841375,0.493588655687202,4.44678940630723,0,0,0.224862112384854,0,0,0.50925170356284,0.287696137450811,0.486405680325106,0.823684239564244,0,0.744281895337007,0.312037673114561,0.757736633841335,0.896987067609561,0.482443521363367,0.184753190166605,0.37898282354097,0.651859905768103,0.678980343100753,0.234690248288502,0.335012514883631,0,0.585400943573396,0.157635144106191,0,0,0,0.172684981865896,0.144649058581512,0,0.54390568381871,1.96705709207614,0,0.642202359951168,0.234423373184406,0.983609672260053,0.504941854408746,0.315508219416257,0.780877488593277,0.861693590931196,0.716906393857656,0.222798674082394,0.566153061577665,0,0,0.395287777946524,0,0.709700426041343,0.35613120733451,0.488660878060728,0,1.32745138339963,0.242780636154981,0,0.188605079755898,0,0.922305443831782,0.258428293168221,0,0.356497378384721,0,0,0,1.36175842301515,0.18006109403131,0.129358683782755,0.214337035031592,0.886701168211368,0.178368817602071,0.329098041204242,1.8267896946876,2.81606049676452,0.63549621259146,0.441056796109924,0.49465875882444,0.484393280087717,0.542816324353403,0.238744688006273,0.328281799490123,0,0.370850604021019,0.170870880797853,0,0,0.188368457004691,0,0.228778173206523,1.01987057996313,0.559805809294632,0.552799895217695,0,0.316335993581135,0,0.108005340821801,0,0.218362563746178,0.674321731924103,0.165306911450672,0,0.259229946583586,0,0.56369293868419,0.299033092087958,0.330916980914195,0,0.129159823477731,0,0.234714477291508,0.13020438484395,0.104859344425711,0,0,0,0.405450430580328,0.308132871494482,0.25984164595559,0,0,0,0,0,0,0,0.194915761479505,0,0,0,0.443971906748129,0.269141569828427,0.167884616364078,0,1.50145980360946,0.549454872801795,0.428736758158132,0,2.25900737046827,3.22227665555024,2.86447756719698,4.98374228796694,1.37016503954128,7.55393897389701,4.05013500139084,2.2516060161211,4.98456649882625,4.14208249401456,0.103787347584177,0,0.170733605754134,0.729320151204882,0.419226325255965,0.183843508450014,0.44449345560323,0.206035057238894,0.320919209591815,0.758091635291392,0.25347929989024,0.188626341386076,0.37456602987953,0.448176066834085,0.17230640686684,0.952587382566147,0.115884325944855,0.578727661391115,0,0.588795680537589,1.02860775715625,0.177475806159338,0.715308569841963,0,0.752875043322645,0.169229215783353,0.182927972872773,0,0.407412341537585,0,0.237270036248348,0,0.409231043169689,0.154936841185966,0.578719832943424,0,0.233931608445408,0.859484216193193,0.765153328275374,0.441182838239031,0.463735671240843 | |||
|short_description=p@chr17:37095120..37095143,- | |||
}} |
Latest revision as of 20:54, 4 August 2015
Short description: | p@chr17:37095120..37095143, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:37095120..37095143, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 6.36e-13 | 10 |
neuron associated cell | 6.36e-13 | 10 |
glial cell (sensu Vertebrata) | 6.36e-13 | 10 |
neuron associated cell (sensu Vertebrata) | 6.36e-13 | 10 |
glial cell | 6.36e-13 | 10 |
glioblast | 6.36e-13 | 10 |
glioblast (sensu Vertebrata) | 6.36e-13 | 10 |
oligodendrocyte | 3.85e-10 | 6 |
macroglial cell | 3.85e-10 | 6 |
astrocyte | 3.85e-10 | 6 |
oligodendrocyte precursor cell | 4.95e-10 | 8 |
muscle precursor cell | 4.67e-07 | 6 |
muscle cell | 4.67e-07 | 6 |
myoblast | 4.67e-07 | 6 |
epithelial cell of thymus | 7.26e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 7.31e-19 | 10 |
visual cortex | 7.31e-19 | 10 |
neocortex | 7.31e-19 | 10 |
regional part of cerebral cortex | 4.53e-17 | 17 |
cerebral cortex | 1.64e-15 | 21 |
cerebral hemisphere | 1.64e-15 | 21 |
pallium | 1.64e-15 | 21 |
brain grey matter | 7.38e-12 | 29 |
regional part of telencephalon | 7.38e-12 | 29 |
telencephalon | 7.38e-12 | 29 |
regional part of brain | 1.58e-10 | 46 |
regional part of forebrain | 2.68e-10 | 39 |
forebrain | 2.68e-10 | 39 |
future forebrain | 2.68e-10 | 39 |
brain | 3.35e-10 | 47 |
future brain | 3.35e-10 | 47 |
anterior neural tube | 6.20e-10 | 40 |
gray matter | 1.47e-09 | 34 |
neural tube | 9.16e-09 | 52 |
neural rod | 9.16e-09 | 52 |
future spinal cord | 9.16e-09 | 52 |
neural keel | 9.16e-09 | 52 |
nervous system | 1.34e-08 | 75 |
regional part of nervous system | 2.88e-08 | 54 |
pre-chordal neural plate | 2.39e-07 | 49 |
central nervous system | 3.45e-07 | 73 |
aorta | 9.59e-07 | 4 |
artery | 9.59e-07 | 4 |
systemic artery | 9.59e-07 | 4 |
arterial blood vessel | 9.59e-07 | 4 |
systemic arterial system | 9.59e-07 | 4 |
aortic system | 9.59e-07 | 4 |
arterial system | 9.59e-07 | 4 |