FFCP PHASE1:Mm9::chr1:137271513..137271523,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=77552|HGNC=|MCL_coexpression_id=283|UniProt=|association_with_transcript=130bp_to_ENSMUST00000159181_5end|description=CAGE_peak_8_at_Shisa4_5end|id=chr1:137271513..137271523,-|ontology_enrichment_celltype=CL:0000221!3.57e-12!44;CL:0000133!3.57e-12!44;CL:0000055!8.89e-12!50;CL:0002319!1.05e-11!43;CL:0002453!1.27e-07!8;CL:0000333!1.58e-07!10;CL:0000095!1.58e-07!10;CL:0000243!1.58e-07!10;CL:0000123!1.58e-07!10;CL:0000125!1.58e-07!10;CL:0000030!1.58e-07!10;CL:0000339!1.58e-07!10;CL:0000393!3.76e-07!39;CL:0000211!3.76e-07!39|ontology_enrichment_celltype_v019_2=CL:0000221,1.06e-17,44;CL:0000133,1.06e-17,44;CL:0002319,9.96e-17,43;CL:0002453,5.45e-16,8;CL:0002321,3.44e-14,70;CL:0000333,2.02e-12,10;CL:0000095,2.02e-12,10;CL:0000243,2.02e-12,10;CL:0000123,2.02e-12,10;CL:0000125,2.02e-12,10;CL:0000030,2.02e-12,10;CL:0000339,2.02e-12,10;CL:0000128,2.59e-12,6;CL:0000126,2.59e-12,6;CL:0000127,2.59e-12,6;CL:0000117,1.18e-09,23;CL:0000337,1.18e-09,23;CL:0000393,1.47e-09,39;CL:0000211,1.47e-09,39;CL:0000540,5.40e-08,33;CL:0000047,5.40e-08,33;CL:0000031,5.40e-08,33;CL:0000404,5.40e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!3.86e-21!102;UBERON:0000924!3.86e-21!102;UBERON:0006601!3.86e-21!102;UBERON:0000073!1.68e-20!75;UBERON:0001016!1.68e-20!75;UBERON:0001017!4.38e-20!73;UBERON:0005743!4.38e-20!73;UBERON:0000033!6.86e-17!63;UBERON:0002346!4.61e-15!71;UBERON:0003075!4.61e-15!71;UBERON:0007284!4.61e-15!71;UBERON:0001049!2.44e-14!52;UBERON:0005068!2.44e-14!52;UBERON:0006241!2.44e-14!52;UBERON:0007135!2.44e-14!52;UBERON:0000955!2.19e-13!50;UBERON:0006238!2.19e-13!50;UBERON:0002616!6.20e-13!49;UBERON:0002020!2.17e-10!34;UBERON:0003056!7.57e-10!49;UBERON:0003076!2.31e-08!12;UBERON:0003057!2.31e-08!12;UBERON:0007811!2.93e-08!86;UBERON:0003080!4.90e-08!40;UBERON:0002791!6.60e-08!29;UBERON:0003528!6.60e-08!29;UBERON:0001893!6.60e-08!29;UBERON:0000153!8.28e-08!94;UBERON:0002780!1.51e-07!39;UBERON:0001890!1.51e-07!39;UBERON:0006240!1.51e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.15e-25,73;UBERON:0001016,1.00e-24,75;UBERON:0004121,2.79e-21,95;UBERON:0000924,2.79e-21,95;UBERON:0006601,2.79e-21,95;UBERON:0000073,4.12e-21,54;UBERON:0001049,1.22e-18,52;UBERON:0005068,1.22e-18,52;UBERON:0006241,1.22e-18,52;UBERON:0007135,1.22e-18,52;UBERON:0002346,3.32e-16,64;UBERON:0003075,3.32e-16,64;UBERON:0007284,3.32e-16,64;UBERON:0010371,2.35e-14,73;UBERON:0002020,3.40e-14,34;UBERON:0002616,9.41e-14,46;UBERON:0000955,2.46e-13,47;UBERON:0006238,2.46e-13,47;UBERON:0003076,6.42e-11,12;UBERON:0003057,6.42e-11,12;UBERON:0003528,1.48e-10,29;UBERON:0002791,1.48e-10,29;UBERON:0001893,1.48e-10,29;UBERON:0003080,4.51e-10,40;UBERON:0010314,8.10e-10,92;UBERON:0002780,3.80e-09,39;UBERON:0001890,3.80e-09,39;UBERON:0006240,3.80e-09,39;UBERON:0003056,2.36e-08,49;UBERON:0002950,7.26e-08,4;UBERON:0001891,7.26e-08,4;UBERON:0009616,7.26e-08,4;UBERON:0010286,7.26e-08,4;UBERON:0004111,8.24e-08,122;UBERON:0002420,1.99e-07,8;UBERON:0007245,1.99e-07,8;UBERON:0010009,1.99e-07,8;UBERON:0010011,1.99e-07,8;UBERON:0000454,1.99e-07,8;UBERON:0002240,6.44e-07,6;UBERON:0005174,6.44e-07,6;UBERON:0001137,6.44e-07,6|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6366586336825,1.31790010585369,2.0190142737785,2.34717403304412,7.84890562969608,4.39372365468944,5.05517737593137,3.3596741190087,7.18762821824858,0,0,0,0.514518872071894,0,0,1.01158230429799,0,0,1.35537812827653,0.889294796111139,0,0,0,3.59520132622086,7.30014780110954,0.103689612308478,0.135005938331691,0.210324961351382,1.99955689082663,1.76694832761291,0,0,0,4.40463523997555,1.78762273319263,2.30409799884365,0.659431438650969,1.09785172322892,1.04182674111352,5.30447698102624,1.68828783009504,2.75036845998258,1.17851434189467,1.42371680799103,0.931997229126503,0.227178579999552,0.453429360640713,0,0,0,0,0,0,0.702222100658759,1.36344258062446,2.07828803682295,1.7666978725517,1.12674735821344,1.28326477414318,2.54805239706646,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0.247194967734374,0.289198713839823,0.884610551949874,0.161766849947409,0.662524555381181,0.484875253135222,0,0.878342391034642,0.628340120440365,0,0,0,0,1.79748767285787,2.74500361691176,0,2.25971616249959,2.55715457330331,1.66230435647648,1.46017136760982,0.203678727700633,0,0,0.210441855886474,0.650602214813519,0.689706313300419,1.26043490863744,0.30140963567143,0.340182495756639,0.12811372028485,0.187403449119458,0.776110112217047,0.646703978798527,0.189106080167819,0,0.43839146485515,0,0,0.411564272815887,0,0,0,0,0.207125772535502,0.469052119962192,0,0.23674473558521,0,0,0.232533944750408,0,0,0,0,0.162137619091711,0,0,0,2.3131894342054,0.308713837137853,0,0,0.213288250535234,0.928946687441754,0,0,0,0,0,0,0.502670417600539,0,0,0,0.216138049874694,0,0.758671603812327,0.456994050438915,0,0.407302655690628,0.581857461502877,0.210407459670956,0.316182685621286,0.442830443938806,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0.568474235311454,0,0.339490171550376,0,0,0.238043640886014,0.195133647857799,0.315270288212382,0.221464689648775,0.159454768657487,0.163863314715738,0,0,0,0,0.491764273019036,0,2.72936002979246,2.93029216480508,0.983609672260053,1.26235463602186,0,1.17131623288992,0.215423397732799,1.67278158566786,0.222798674082394,0.566153061577665,0,0.292255857911312,0.790575555893047,0.963963949265421,0.283880170416537,0.35613120733451,0.162886959353576,0.164970122972535,0,0.242780636154981,0.604647113929502,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0.258717367565509,0.214337035031592,0,0.178368817602071,0.164549020602121,0,0,0,0,0.16488625294148,0,0.120625849856312,0,0,0,2.59595422814714,0,0.412773735926445,0,0,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0,0,0.134864346384821,0.247960367176008,0.523511883968059,0,2.4853572523477,0,0.149516546043979,0,0,0.129159823477731,0,0.234714477291508,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0.443971906748129,0,0.167884616364078,0.579568782096571,0.187682475451182,0,0,2.50786052017682,0,1.84130094602871,0.572895513439397,1.3748254587495,0.685082519770642,0.755393897389701,2.02506750069542,1.35096360967266,3.17199686288943,0.51776031175182,0.31136204275253,0.798049746802062,0.341467211508268,0,0.419226325255965,0,0.44449345560323,0.206035057238894,0.320919209591815,0,0.25347929989024,0.377252682772152,0.0936415074698824,0.128050304809739,0.34461281373368,0.476293691283074,0.115884325944855,0,0,0,0.342869252385415,0.532427418478012,0,0.290692833264657,0.188218760830661,0.169229215783353,0,0,0.407412341537585,0,0.118635018124174,0,0,0.77468420592983,0,0.249810577937946,0,0,0.191288332068843,1.32354851471709,0.695603506861264|short_description=p8@Shisa4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:77552 | |||
|HGNC= | |||
|MCL_coexpression_id=283 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=130bp_to_ENSMUST00000159181_5end | |||
|cluster_id=chr1:137271513..137271523,- | |||
|description=CAGE_peak_8_at_Shisa4_5end | |||
|id=chr1:137271513..137271523,- | |||
|ontology_enrichment_celltype=CL:0000221!3.57e-12!44;CL:0000133!3.57e-12!44;CL:0000055!8.89e-12!50;CL:0002319!1.05e-11!43;CL:0002453!1.27e-07!8;CL:0000333!1.58e-07!10;CL:0000095!1.58e-07!10;CL:0000243!1.58e-07!10;CL:0000123!1.58e-07!10;CL:0000125!1.58e-07!10;CL:0000030!1.58e-07!10;CL:0000339!1.58e-07!10;CL:0000393!3.76e-07!39;CL:0000211!3.76e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.06e-17,44;CL:0000133,1.06e-17,44;CL:0002319,9.96e-17,43;CL:0002453,5.45e-16,8;CL:0002321,3.44e-14,70;CL:0000333,2.02e-12,10;CL:0000095,2.02e-12,10;CL:0000243,2.02e-12,10;CL:0000123,2.02e-12,10;CL:0000125,2.02e-12,10;CL:0000030,2.02e-12,10;CL:0000339,2.02e-12,10;CL:0000128,2.59e-12,6;CL:0000126,2.59e-12,6;CL:0000127,2.59e-12,6;CL:0000117,1.18e-09,23;CL:0000337,1.18e-09,23;CL:0000393,1.47e-09,39;CL:0000211,1.47e-09,39;CL:0000540,5.40e-08,33;CL:0000047,5.40e-08,33;CL:0000031,5.40e-08,33;CL:0000404,5.40e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.86e-21!102;UBERON:0000924!3.86e-21!102;UBERON:0006601!3.86e-21!102;UBERON:0000073!1.68e-20!75;UBERON:0001016!1.68e-20!75;UBERON:0001017!4.38e-20!73;UBERON:0005743!4.38e-20!73;UBERON:0000033!6.86e-17!63;UBERON:0002346!4.61e-15!71;UBERON:0003075!4.61e-15!71;UBERON:0007284!4.61e-15!71;UBERON:0001049!2.44e-14!52;UBERON:0005068!2.44e-14!52;UBERON:0006241!2.44e-14!52;UBERON:0007135!2.44e-14!52;UBERON:0000955!2.19e-13!50;UBERON:0006238!2.19e-13!50;UBERON:0002616!6.20e-13!49;UBERON:0002020!2.17e-10!34;UBERON:0003056!7.57e-10!49;UBERON:0003076!2.31e-08!12;UBERON:0003057!2.31e-08!12;UBERON:0007811!2.93e-08!86;UBERON:0003080!4.90e-08!40;UBERON:0002791!6.60e-08!29;UBERON:0003528!6.60e-08!29;UBERON:0001893!6.60e-08!29;UBERON:0000153!8.28e-08!94;UBERON:0002780!1.51e-07!39;UBERON:0001890!1.51e-07!39;UBERON:0006240!1.51e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.15e-25,73;UBERON:0001016,1.00e-24,75;UBERON:0004121,2.79e-21,95;UBERON:0000924,2.79e-21,95;UBERON:0006601,2.79e-21,95;UBERON:0000073,4.12e-21,54;UBERON:0001049,1.22e-18,52;UBERON:0005068,1.22e-18,52;UBERON:0006241,1.22e-18,52;UBERON:0007135,1.22e-18,52;UBERON:0002346,3.32e-16,64;UBERON:0003075,3.32e-16,64;UBERON:0007284,3.32e-16,64;UBERON:0010371,2.35e-14,73;UBERON:0002020,3.40e-14,34;UBERON:0002616,9.41e-14,46;UBERON:0000955,2.46e-13,47;UBERON:0006238,2.46e-13,47;UBERON:0003076,6.42e-11,12;UBERON:0003057,6.42e-11,12;UBERON:0003528,1.48e-10,29;UBERON:0002791,1.48e-10,29;UBERON:0001893,1.48e-10,29;UBERON:0003080,4.51e-10,40;UBERON:0010314,8.10e-10,92;UBERON:0002780,3.80e-09,39;UBERON:0001890,3.80e-09,39;UBERON:0006240,3.80e-09,39;UBERON:0003056,2.36e-08,49;UBERON:0002950,7.26e-08,4;UBERON:0001891,7.26e-08,4;UBERON:0009616,7.26e-08,4;UBERON:0010286,7.26e-08,4;UBERON:0004111,8.24e-08,122;UBERON:0002420,1.99e-07,8;UBERON:0007245,1.99e-07,8;UBERON:0010009,1.99e-07,8;UBERON:0010011,1.99e-07,8;UBERON:0000454,1.99e-07,8;UBERON:0002240,6.44e-07,6;UBERON:0005174,6.44e-07,6;UBERON:0001137,6.44e-07,6 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6366586336825,1.31790010585369,2.0190142737785,2.34717403304412,7.84890562969608,4.39372365468944,5.05517737593137,3.3596741190087,7.18762821824858,0,0,0,0.514518872071894,0,0,1.01158230429799,0,0,1.35537812827653,0.889294796111139,0,0,0,3.59520132622086,7.30014780110954,0.103689612308478,0.135005938331691,0.210324961351382,1.99955689082663,1.76694832761291,0,0,0,4.40463523997555,1.78762273319263,2.30409799884365,0.659431438650969,1.09785172322892,1.04182674111352,5.30447698102624,1.68828783009504,2.75036845998258,1.17851434189467,1.42371680799103,0.931997229126503,0.227178579999552,0.453429360640713,0,0,0,0,0,0,0.702222100658759,1.36344258062446,2.07828803682295,1.7666978725517,1.12674735821344,1.28326477414318,2.54805239706646,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0.247194967734374,0.289198713839823,0.884610551949874,0.161766849947409,0.662524555381181,0.484875253135222,0,0.878342391034642,0.628340120440365,0,0,0,0,1.79748767285787,2.74500361691176,0,2.25971616249959,2.55715457330331,1.66230435647648,1.46017136760982,0.203678727700633,0,0,0.210441855886474,0.650602214813519,0.689706313300419,1.26043490863744,0.30140963567143,0.340182495756639,0.12811372028485,0.187403449119458,0.776110112217047,0.646703978798527,0.189106080167819,0,0.43839146485515,0,0,0.411564272815887,0,0,0,0,0.207125772535502,0.469052119962192,0,0.23674473558521,0,0,0.232533944750408,0,0,0,0,0.162137619091711,0,0,0,2.3131894342054,0.308713837137853,0,0,0.213288250535234,0.928946687441754,0,0,0,0,0,0,0.502670417600539,0,0,0,0.216138049874694,0,0.758671603812327,0.456994050438915,0,0.407302655690628,0.581857461502877,0.210407459670956,0.316182685621286,0.442830443938806,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0.568474235311454,0,0.339490171550376,0,0,0.238043640886014,0.195133647857799,0.315270288212382,0.221464689648775,0.159454768657487,0.163863314715738,0,0,0,0,0.491764273019036,0,2.72936002979246,2.93029216480508,0.983609672260053,1.26235463602186,0,1.17131623288992,0.215423397732799,1.67278158566786,0.222798674082394,0.566153061577665,0,0.292255857911312,0.790575555893047,0.963963949265421,0.283880170416537,0.35613120733451,0.162886959353576,0.164970122972535,0,0.242780636154981,0.604647113929502,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0.258717367565509,0.214337035031592,0,0.178368817602071,0.164549020602121,0,0,0,0,0.16488625294148,0,0.120625849856312,0,0,0,2.59595422814714,0,0.412773735926445,0,0,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0,0,0.134864346384821,0.247960367176008,0.523511883968059,0,2.4853572523477,0,0.149516546043979,0,0,0.129159823477731,0,0.234714477291508,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0.443971906748129,0,0.167884616364078,0.579568782096571,0.187682475451182,0,0,2.50786052017682,0,1.84130094602871,0.572895513439397,1.3748254587495,0.685082519770642,0.755393897389701,2.02506750069542,1.35096360967266,3.17199686288943,0.51776031175182,0.31136204275253,0.798049746802062,0.341467211508268,0,0.419226325255965,0,0.44449345560323,0.206035057238894,0.320919209591815,0,0.25347929989024,0.377252682772152,0.0936415074698824,0.128050304809739,0.34461281373368,0.476293691283074,0.115884325944855,0,0,0,0.342869252385415,0.532427418478012,0,0.290692833264657,0.188218760830661,0.169229215783353,0,0,0.407412341537585,0,0.118635018124174,0,0,0.77468420592983,0,0.249810577937946,0,0,0.191288332068843,1.32354851471709,0.695603506861264 | |||
|short_description=p8@Shisa4 | |||
}} |
Revision as of 20:50, 4 August 2015
Short description: | p8@Shisa4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Shisa4_5end |
Coexpression cluster: | MCL_coexpression_mm9:283 |
Association with transcript: | 130bp_to_ENSMUST00000159181_5end |
EntrezGene: | 77552 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.06e-17 | 44 |
neurectodermal cell | 1.06e-17 | 44 |
neural cell | 9.96e-17 | 43 |
oligodendrocyte precursor cell | 5.45e-16 | 8 |
embryonic cell | 3.44e-14 | 70 |
migratory neural crest cell | 2.02e-12 | 10 |
neuron associated cell | 2.02e-12 | 10 |
glial cell (sensu Vertebrata) | 2.02e-12 | 10 |
neuron associated cell (sensu Vertebrata) | 2.02e-12 | 10 |
glial cell | 2.02e-12 | 10 |
glioblast | 2.02e-12 | 10 |
glioblast (sensu Vertebrata) | 2.02e-12 | 10 |
oligodendrocyte | 2.59e-12 | 6 |
macroglial cell | 2.59e-12 | 6 |
astrocyte | 2.59e-12 | 6 |
CNS neuron (sensu Vertebrata) | 1.18e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.18e-09 | 23 |
electrically responsive cell | 1.47e-09 | 39 |
electrically active cell | 1.47e-09 | 39 |
neuron | 5.40e-08 | 33 |
neuronal stem cell | 5.40e-08 | 33 |
neuroblast | 5.40e-08 | 33 |
electrically signaling cell | 5.40e-08 | 33 |