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FFCP PHASE1:Mm9::chr2:25323395..25323417,+: Difference between revisions

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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=234|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:25323395..25323417,+|id=chr2:25323395..25323417,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.08e-23!63;UBERON:0001049!3.39e-22!52;UBERON:0005068!3.39e-22!52;UBERON:0006241!3.39e-22!52;UBERON:0007135!3.39e-22!52;UBERON:0000955!8.44e-22!50;UBERON:0006238!8.44e-22!50;UBERON:0001017!2.10e-21!73;UBERON:0005743!2.10e-21!73;UBERON:0002616!5.99e-21!49;UBERON:0000073!2.93e-20!75;UBERON:0001016!2.93e-20!75;UBERON:0002346!5.71e-20!71;UBERON:0003075!5.71e-20!71;UBERON:0007284!5.71e-20!71;UBERON:0004121!2.98e-19!102;UBERON:0000924!2.98e-19!102;UBERON:0006601!2.98e-19!102;UBERON:0003056!3.04e-17!49;UBERON:0003080!5.40e-14!40;UBERON:0002780!3.26e-13!39;UBERON:0001890!3.26e-13!39;UBERON:0006240!3.26e-13!39;UBERON:0007811!5.88e-12!86;UBERON:0002020!3.65e-11!34;UBERON:0000153!1.83e-09!94;UBERON:0003076!2.15e-09!12;UBERON:0003057!2.15e-09!12;UBERON:0002791!1.66e-08!29;UBERON:0003528!1.66e-08!29;UBERON:0001893!1.66e-08!29;UBERON:0000025!6.33e-08!114;UBERON:0004111!3.84e-07!122;UBERON:0002298!5.25e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.72e-29,54;UBERON:0001049,4.21e-26,52;UBERON:0005068,4.21e-26,52;UBERON:0006241,4.21e-26,52;UBERON:0007135,4.21e-26,52;UBERON:0002346,2.74e-25,64;UBERON:0003075,2.74e-25,64;UBERON:0007284,2.74e-25,64;UBERON:0001017,3.12e-25,73;UBERON:0001016,2.90e-24,75;UBERON:0000955,4.21e-24,47;UBERON:0006238,4.21e-24,47;UBERON:0002616,8.95e-23,46;UBERON:0004121,1.60e-21,95;UBERON:0000924,1.60e-21,95;UBERON:0006601,1.60e-21,95;UBERON:0010371,6.86e-21,73;UBERON:0010314,8.31e-20,92;UBERON:0003056,8.42e-17,49;UBERON:0003080,8.97e-16,40;UBERON:0002780,1.42e-14,39;UBERON:0001890,1.42e-14,39;UBERON:0006240,1.42e-14,39;UBERON:0003076,1.08e-11,12;UBERON:0003057,1.08e-11,12;UBERON:0000025,2.22e-11,114;UBERON:0002020,5.47e-10,34;UBERON:0004111,5.68e-10,122;UBERON:0004733,1.37e-09,6;UBERON:0004732,1.37e-09,6;UBERON:0002028,1.37e-09,6;UBERON:0007277,1.37e-09,6;UBERON:0002021,1.97e-09,10;UBERON:0000411,1.97e-09,10;UBERON:0001950,1.97e-09,10;UBERON:0001894,1.59e-08,10;UBERON:0006222,1.59e-08,10;UBERON:0002950,3.47e-08,4;UBERON:0001891,3.47e-08,4;UBERON:0009616,3.47e-08,4;UBERON:0010286,3.47e-08,4;UBERON:0003528,4.09e-08,29;UBERON:0002791,4.09e-08,29;UBERON:0001893,4.09e-08,29|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31668831589172,0.695036658406197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69434806608824,1.09012578190223,0.219686182734472,0.388859798148567,0.979904951377538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.58720353658895,8.06858441175265,0.311068836925433,0,0,5.42736870367227,6.84692476950002,0.122490799214954,0,0,30.8324466798288,14.5563565417114,5.52983519722476,0.131886287730194,0.182975287204819,0,54.999050803272,163.201156909187,113.834694593724,2.94628585473668,0.854230084794618,0.559198337475902,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,5.85561594023094,8.3778682725382,0,0,0,0,10.3355541189328,2.74500361691176,0.125654352112864,5.73620256634512,8.18289463457058,3.94797284663164,7.78758062725237,0.305518091550949,0.248813941220186,9.60346482047964,3.36706969418358,0,1.14951052216736,0.360124259610698,0.753524089178575,0.544291993210623,0.896796041993948,2.43624483855295,2.58703370739016,0,0,0,0,0,0,0,0.995171334092466,0,0,0,0,0,0,0,0.787056926989615,1.23413690309903,1.86027155800326,1.3413670069981,2.21854150497622,0.658239399653922,0.656669856316381,0,0.292399974850665,0.219550115291051,2.14730270016595,3.78521907415429,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252946148497029,0,0.156998727841375,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.1284519189257,12.3072270921813,0,0,0,0,0,0.477937595905104,0.668396022247182,0,0,0.292255857911312,0,8.67567554338879,0,0,0.488660878060728,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.680879211507576,0,1.29358683782755,2.35770738534752,1.95074257006501,9.45354733290974,3.78462747384878,5.78483403317739,0.23467170806371,0,0,0,0,0.0603129249281559,0.835606408021955,0.820704498725306,0,2.96680483216816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0,2.25477175473676,1.34564891439581,2.81279433777066,1.36115831840833,3.35815541042101,4.39285926276023,1.05621514781179,0.5208175393758,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0.501572104035363,0,1.84130094602871,0.572895513439397,18.5601436931183,10.9613203163303,6.7985450765073,4.72515750162264,7.65546045481175,4.53142408984205,5.1776031175182,0,0,0,0,0.209613162627982,0,0.888986911206461,0.412070114477788,0.64183841918363,0.252697211763798,0,0.377252682772152,0.561849044819294,0.192075457214608,0.459483751644906,0,0.463537303779422,0.77163688185482,2.47251540481984,0,0.342869252385415,0.887379030796687,1.90748951957857,0.436039249896986,0.470546902076653,0.761531471025089,0.365855945745545,0.263069711437843,0.271608227691724,0.561142271657738,0.355905054372522,0.492522411877817,0,0.619747364743864,0.385813221962283,0.749431733813838,1.16965804222704,0.214871054048298,0.191288332068843,0.661774257358546,0|short_description=p@chr2:25323395..25323417,+}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=234
|TSSclassifier=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr2:25323395..25323417,+
|description=CAGE_peak_at_chr2:25323395..25323417,+
|id=chr2:25323395..25323417,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!2.08e-23!63;UBERON:0001049!3.39e-22!52;UBERON:0005068!3.39e-22!52;UBERON:0006241!3.39e-22!52;UBERON:0007135!3.39e-22!52;UBERON:0000955!8.44e-22!50;UBERON:0006238!8.44e-22!50;UBERON:0001017!2.10e-21!73;UBERON:0005743!2.10e-21!73;UBERON:0002616!5.99e-21!49;UBERON:0000073!2.93e-20!75;UBERON:0001016!2.93e-20!75;UBERON:0002346!5.71e-20!71;UBERON:0003075!5.71e-20!71;UBERON:0007284!5.71e-20!71;UBERON:0004121!2.98e-19!102;UBERON:0000924!2.98e-19!102;UBERON:0006601!2.98e-19!102;UBERON:0003056!3.04e-17!49;UBERON:0003080!5.40e-14!40;UBERON:0002780!3.26e-13!39;UBERON:0001890!3.26e-13!39;UBERON:0006240!3.26e-13!39;UBERON:0007811!5.88e-12!86;UBERON:0002020!3.65e-11!34;UBERON:0000153!1.83e-09!94;UBERON:0003076!2.15e-09!12;UBERON:0003057!2.15e-09!12;UBERON:0002791!1.66e-08!29;UBERON:0003528!1.66e-08!29;UBERON:0001893!1.66e-08!29;UBERON:0000025!6.33e-08!114;UBERON:0004111!3.84e-07!122;UBERON:0002298!5.25e-07!6
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.72e-29,54;UBERON:0001049,4.21e-26,52;UBERON:0005068,4.21e-26,52;UBERON:0006241,4.21e-26,52;UBERON:0007135,4.21e-26,52;UBERON:0002346,2.74e-25,64;UBERON:0003075,2.74e-25,64;UBERON:0007284,2.74e-25,64;UBERON:0001017,3.12e-25,73;UBERON:0001016,2.90e-24,75;UBERON:0000955,4.21e-24,47;UBERON:0006238,4.21e-24,47;UBERON:0002616,8.95e-23,46;UBERON:0004121,1.60e-21,95;UBERON:0000924,1.60e-21,95;UBERON:0006601,1.60e-21,95;UBERON:0010371,6.86e-21,73;UBERON:0010314,8.31e-20,92;UBERON:0003056,8.42e-17,49;UBERON:0003080,8.97e-16,40;UBERON:0002780,1.42e-14,39;UBERON:0001890,1.42e-14,39;UBERON:0006240,1.42e-14,39;UBERON:0003076,1.08e-11,12;UBERON:0003057,1.08e-11,12;UBERON:0000025,2.22e-11,114;UBERON:0002020,5.47e-10,34;UBERON:0004111,5.68e-10,122;UBERON:0004733,1.37e-09,6;UBERON:0004732,1.37e-09,6;UBERON:0002028,1.37e-09,6;UBERON:0007277,1.37e-09,6;UBERON:0002021,1.97e-09,10;UBERON:0000411,1.97e-09,10;UBERON:0001950,1.97e-09,10;UBERON:0001894,1.59e-08,10;UBERON:0006222,1.59e-08,10;UBERON:0002950,3.47e-08,4;UBERON:0001891,3.47e-08,4;UBERON:0009616,3.47e-08,4;UBERON:0010286,3.47e-08,4;UBERON:0003528,4.09e-08,29;UBERON:0002791,4.09e-08,29;UBERON:0001893,4.09e-08,29
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31668831589172,0.695036658406197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69434806608824,1.09012578190223,0.219686182734472,0.388859798148567,0.979904951377538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.58720353658895,8.06858441175265,0.311068836925433,0,0,5.42736870367227,6.84692476950002,0.122490799214954,0,0,30.8324466798288,14.5563565417114,5.52983519722476,0.131886287730194,0.182975287204819,0,54.999050803272,163.201156909187,113.834694593724,2.94628585473668,0.854230084794618,0.559198337475902,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,5.85561594023094,8.3778682725382,0,0,0,0,10.3355541189328,2.74500361691176,0.125654352112864,5.73620256634512,8.18289463457058,3.94797284663164,7.78758062725237,0.305518091550949,0.248813941220186,9.60346482047964,3.36706969418358,0,1.14951052216736,0.360124259610698,0.753524089178575,0.544291993210623,0.896796041993948,2.43624483855295,2.58703370739016,0,0,0,0,0,0,0,0.995171334092466,0,0,0,0,0,0,0,0.787056926989615,1.23413690309903,1.86027155800326,1.3413670069981,2.21854150497622,0.658239399653922,0.656669856316381,0,0.292399974850665,0.219550115291051,2.14730270016595,3.78521907415429,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252946148497029,0,0.156998727841375,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.1284519189257,12.3072270921813,0,0,0,0,0,0.477937595905104,0.668396022247182,0,0,0.292255857911312,0,8.67567554338879,0,0,0.488660878060728,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.680879211507576,0,1.29358683782755,2.35770738534752,1.95074257006501,9.45354733290974,3.78462747384878,5.78483403317739,0.23467170806371,0,0,0,0,0.0603129249281559,0.835606408021955,0.820704498725306,0,2.96680483216816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0,2.25477175473676,1.34564891439581,2.81279433777066,1.36115831840833,3.35815541042101,4.39285926276023,1.05621514781179,0.5208175393758,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0.501572104035363,0,1.84130094602871,0.572895513439397,18.5601436931183,10.9613203163303,6.7985450765073,4.72515750162264,7.65546045481175,4.53142408984205,5.1776031175182,0,0,0,0,0.209613162627982,0,0.888986911206461,0.412070114477788,0.64183841918363,0.252697211763798,0,0.377252682772152,0.561849044819294,0.192075457214608,0.459483751644906,0,0.463537303779422,0.77163688185482,2.47251540481984,0,0.342869252385415,0.887379030796687,1.90748951957857,0.436039249896986,0.470546902076653,0.761531471025089,0.365855945745545,0.263069711437843,0.271608227691724,0.561142271657738,0.355905054372522,0.492522411877817,0,0.619747364743864,0.385813221962283,0.749431733813838,1.16965804222704,0.214871054048298,0.191288332068843,0.661774257358546,0
|short_description=p@chr2:25323395..25323417,+
}}

Latest revision as of 20:47, 4 August 2015

Short description:p@chr2:25323395..25323417, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr2:25323395..25323417, +
Coexpression cluster:MCL_coexpression_mm9:234
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p@chr2:25323395..25323417+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.32
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C89.59
Mouse Microglia, donor2.CNhs12634.11736-123E88.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.85
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D330.83
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F314.56
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E455.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5163.20
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6113.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.86
cerebellum, neonate N30.CNhs11135.1395-42I28.38
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A410.34
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D55.74
cortex, neonate N30.CNhs11107.1392-42F28.18
diencephalon, adult.CNhs10482.20-12F23.95
diencephalon, neonate N30.CNhs11201.1388-42B27.79
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B29.60
eyeball, adult.CNhs10484.31-12G43.37
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G82.44
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E32.22
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D22.15
hippocampus, adult.CNhs10478.13-16E83.79
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C214.13
medulla oblongata, neonate N30.CNhs11200.1396-42A312.31
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I98.68
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B91.95
pituitary gland, embryo E16.CNhs11036.449-43F69.45
pituitary gland, embryo E17.CNhs11039.1265-44F53.78
pituitary gland, neonate N00.CNhs11190.1308-22E95.78
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.97
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F51.35
testis, embryo E15.CNhs11034.443-27C52.81
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I53.36
testis, embryo E18.CNhs11027.503-18G54.39
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D718.56
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.96
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.72e-2954
neural tube4.21e-2652
neural rod4.21e-2652
future spinal cord4.21e-2652
neural keel4.21e-2652
neurectoderm2.74e-2564
neural plate2.74e-2564
presumptive neural plate2.74e-2564
central nervous system3.12e-2573
nervous system2.90e-2475
brain4.21e-2447
future brain4.21e-2447
regional part of brain8.95e-2346
ectoderm-derived structure1.60e-2195
ectoderm1.60e-2195
presumptive ectoderm1.60e-2195
ecto-epithelium6.86e-2173
structure with developmental contribution from neural crest8.31e-2092
pre-chordal neural plate8.42e-1749
anterior neural tube8.97e-1640
regional part of forebrain1.42e-1439
forebrain1.42e-1439
future forebrain1.42e-1439
posterior neural tube1.08e-1112
chordal neural plate1.08e-1112
tube2.22e-11114
gray matter5.47e-1034
anatomical conduit5.68e-10122
segmental subdivision of hindbrain1.37e-096
segmental subdivision of nervous system1.37e-096
hindbrain1.37e-096
presumptive hindbrain1.37e-096
occipital lobe1.97e-0910
visual cortex1.97e-0910
neocortex1.97e-0910
diencephalon1.59e-0810
future diencephalon1.59e-0810
regional part of midbrain3.47e-084
midbrain3.47e-084
presumptive midbrain3.47e-084
midbrain neural tube3.47e-084
brain grey matter4.09e-0829
regional part of telencephalon4.09e-0829
telencephalon4.09e-0829
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