FFCP PHASE1:Mm9::chr1:135028028..135028050,+: Difference between revisions
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{{FFCP|EntrezGene=108954|HGNC=|MCL_coexpression_id=806|UniProt=|association_with_transcript=107bp_to_ENSMUST00000122956,uc007cps.2_5end|description=CAGE_peak_4_at_Ppp1r15b_5end|id=chr1:135028028..135028050,+|ontology_enrichment_celltype=CL:0000988!4.16e-07!32;CL:0002032!4.16e-07!32;CL:0000037!4.16e-07!32;CL:0000566!4.16e-07!32;CL:0000837!4.16e-07!32;CL:0000838!4.27e-07!12|ontology_enrichment_celltype_v019_2=CL:0000988,3.86e-07,32;CL:0002032,3.86e-07,32;CL:0000037,3.86e-07,32;CL:0000837,3.86e-07,32;CL:0000838,4.27e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!4.32e-14!29;UBERON:0005057!1.14e-13!51;UBERON:0003408!1.05e-12!24;UBERON:0002370!2.00e-12!23;UBERON:0000974!2.00e-12!23;UBERON:0004807!2.00e-12!23;UBERON:0005058!2.00e-12!23;UBERON:0003351!2.00e-12!23;UBERON:0009113!2.00e-12!23;UBERON:0003295!2.00e-12!23;UBERON:0009722!2.00e-12!23;UBERON:0005562!2.00e-12!23;UBERON:0007690!2.00e-12!23;UBERON:0002405!2.75e-12!70;UBERON:0006562!3.45e-11!24;UBERON:0001557!3.45e-11!24;UBERON:0001042!3.45e-11!24;UBERON:0008814!3.45e-11!24;UBERON:0009145!3.45e-11!24;UBERON:0002193!4.45e-11!48;UBERON:0002390!8.68e-11!45;UBERON:0003061!8.68e-11!45;UBERON:0000949!3.28e-10!72;UBERON:0002530!4.81e-09!65;UBERON:0000077!2.07e-08!97;UBERON:0003929!2.15e-08!55;UBERON:0001041!4.35e-08!92;UBERON:0002368!4.70e-08!60;UBERON:0000072!6.67e-08!27;UBERON:0000490!3.33e-07!66;UBERON:0003104!4.63e-07!131;UBERON:0009142!4.63e-07!131|ontology_enrichment_uberon_v019_2=UBERON:0004177,4.32e-14,29;UBERON:0005057,4.32e-14,29;UBERON:0000077,3.31e-13,35;UBERON:0003408,1.05e-12,24;UBERON:0002370,2.00e-12,23;UBERON:0000974,2.00e-12,23;UBERON:0004807,2.00e-12,23;UBERON:0005058,2.00e-12,23;UBERON:0003351,2.00e-12,23;UBERON:0009113,2.00e-12,23;UBERON:0003295,2.00e-12,23;UBERON:0009722,2.00e-12,23;UBERON:0005562,2.00e-12,23;UBERON:0007690,2.00e-12,23;UBERON:0006562,3.44e-11,24;UBERON:0001557,3.44e-11,24;UBERON:0001042,3.44e-11,24;UBERON:0008814,3.44e-11,24;UBERON:0009145,3.44e-11,24;UBERON:0002193,4.27e-11,48;UBERON:0002405,4.27e-11,48;UBERON:0002390,8.32e-11,45;UBERON:0003061,8.32e-11,45;UBERON:0000949,3.28e-10,72;UBERON:0002530,4.81e-09,65;UBERON:0003929,2.26e-08,55;UBERON:0002368,4.70e-08,60;UBERON:0000072,6.96e-08,27;UBERON:0000490,3.44e-07,66|phase1_expression=3.04282809499109,2.09385244583617,3.63999391511629,3.32710632437513,4.00716583957078,2.68606835059024,0.934450562382103,6.06879620175408,32.8037722613384,41.4294211589928,4.45166717386313,5.50427897067821,6.50562773738582,6.46910977900581,3.66420737997229,6.07425802169478,5.59649502502517,7.09789872056035,5.34746291062381,2.54633791078818,3.40173160604279,9.53193131528499,7.31359409589019,3.83981814704176,4.12936705920906,1.72269589234506,1.29228598847722,1.72376986148711,2.47030445293286,1.00812051903972,4.43461021310609,9.52546010189447,9.84103660135312,0,1.1554064790051,1.66234645358492,2.04169356262369,32.2269355667419,19.533383613095,15.7057123192139,9.41170380849623,17.7591826089196,12.62326917881,1.38486499773135,1.01376931219515,0.367093504323363,7.04152209913235,1.52617609466313,1.5378032791413,3.11087838518853,3.07970127575798,4.31257693094915,9.2280433331755,17.4086914082723,20.5017217476903,1.54355661621568,3.72493471920384,1.54701627683233,2.63011399117477,5.81890077199236,1.26766280701236,2.71075625655306,2.66788438833342,2.6996991518442,1.97773272513395,1.4209602298922,1.79760066311043,1.92109152660777,0.933206510776299,2.02508907497536,0.420649922702764,3.14216082844184,3.3130281142742,1.46988959057945,2.1086003624012,0,3.30347642998166,2.55374676170375,3.37934373163736,3.29715719325485,3.65950574409639,2.6045668527838,4.74611098302348,5.06486349028512,3.20876320331301,3.24091444021034,2.84743361598206,2.98239113320481,1.66597625333005,2.56943304363071,2.89864488701678,2.58127163094416,2.03991400112325,4.31762553310254,3.24888208723835,2.24013443548668,4.77511028447956,5.62420064507591,5.19572009205738,3.5333957451034,4.78867627240714,14.115912515575,15.2883143823987,14.2213340630666,0.865964164044856,1.26679932737549,1.51657333504435,4.79572294820052,3.6251303710604,3.71105347662062,3.99016251562112,2.43572382649713,2.53677046981664,1.95939432718409,3.17489509266403,2.76466500925286,5.6854842578906,6.36237170447611,7.96149496754887,3.39710384889559,3.75430581382669,3.39412677194655,0,1.75668478206928,2.93225389538837,3.83185582812887,9.58520996047362,10.1983464268879,10.4197586199913,3.74476598512057,3.20250421973039,3.8952849154988,3.99795936442236,2.30143911597297,4.36354893575076,3.89379031362618,2.74966282395854,4.22983700074316,7.07623723614289,3.15662783829711,2.47228841629137,2.5289231487682,1.26043490863744,2.71268672104287,2.4493139694478,1.92170580427275,2.34254311399322,2.06962696591213,2.58681591519411,2.64748512234947,2.11141348996739,1.97276159184817,2.50242524303038,2.089512999133,2.46938563689532,1.59227413454795,9.12877143507205,8.23513302767089,8.80906848126337,4.55676699578104,3.28336483973535,1.08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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:108954 | |||
|HGNC= | |||
|MCL_coexpression_id=806 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=107bp_to_ENSMUST00000122956,uc007cps.2_5end | |||
|cluster_id=chr1:135028028..135028050,+ | |||
|description=CAGE_peak_4_at_Ppp1r15b_5end | |||
|id=chr1:135028028..135028050,+ | |||
|ontology_enrichment_celltype=CL:0000988!4.16e-07!32;CL:0002032!4.16e-07!32;CL:0000037!4.16e-07!32;CL:0000566!4.16e-07!32;CL:0000837!4.16e-07!32;CL:0000838!4.27e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.86e-07,32;CL:0002032,3.86e-07,32;CL:0000037,3.86e-07,32;CL:0000837,3.86e-07,32;CL:0000838,4.27e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!4.32e-14!29;UBERON:0005057!1.14e-13!51;UBERON:0003408!1.05e-12!24;UBERON:0002370!2.00e-12!23;UBERON:0000974!2.00e-12!23;UBERON:0004807!2.00e-12!23;UBERON:0005058!2.00e-12!23;UBERON:0003351!2.00e-12!23;UBERON:0009113!2.00e-12!23;UBERON:0003295!2.00e-12!23;UBERON:0009722!2.00e-12!23;UBERON:0005562!2.00e-12!23;UBERON:0007690!2.00e-12!23;UBERON:0002405!2.75e-12!70;UBERON:0006562!3.45e-11!24;UBERON:0001557!3.45e-11!24;UBERON:0001042!3.45e-11!24;UBERON:0008814!3.45e-11!24;UBERON:0009145!3.45e-11!24;UBERON:0002193!4.45e-11!48;UBERON:0002390!8.68e-11!45;UBERON:0003061!8.68e-11!45;UBERON:0000949!3.28e-10!72;UBERON:0002530!4.81e-09!65;UBERON:0000077!2.07e-08!97;UBERON:0003929!2.15e-08!55;UBERON:0001041!4.35e-08!92;UBERON:0002368!4.70e-08!60;UBERON:0000072!6.67e-08!27;UBERON:0000490!3.33e-07!66;UBERON:0003104!4.63e-07!131;UBERON:0009142!4.63e-07!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,4.32e-14,29;UBERON:0005057,4.32e-14,29;UBERON:0000077,3.31e-13,35;UBERON:0003408,1.05e-12,24;UBERON:0002370,2.00e-12,23;UBERON:0000974,2.00e-12,23;UBERON:0004807,2.00e-12,23;UBERON:0005058,2.00e-12,23;UBERON:0003351,2.00e-12,23;UBERON:0009113,2.00e-12,23;UBERON:0003295,2.00e-12,23;UBERON:0009722,2.00e-12,23;UBERON:0005562,2.00e-12,23;UBERON:0007690,2.00e-12,23;UBERON:0006562,3.44e-11,24;UBERON:0001557,3.44e-11,24;UBERON:0001042,3.44e-11,24;UBERON:0008814,3.44e-11,24;UBERON:0009145,3.44e-11,24;UBERON:0002193,4.27e-11,48;UBERON:0002405,4.27e-11,48;UBERON:0002390,8.32e-11,45;UBERON:0003061,8.32e-11,45;UBERON:0000949,3.28e-10,72;UBERON:0002530,4.81e-09,65;UBERON:0003929,2.26e-08,55;UBERON:0002368,4.70e-08,60;UBERON:0000072,6.96e-08,27;UBERON:0000490,3.44e-07,66 | |||
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| |||
|short_description=p4@Ppp1r15b | |||
}} |
Revision as of 19:17, 4 August 2015
Short description: | p4@Ppp1r15b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ppp1r15b_5end |
Coexpression cluster: | MCL_coexpression_mm9:806 |
Association with transcript: | 107bp_to_ENSMUST00000122956, uc007cps.2_5end |
EntrezGene: | 108954 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.86e-07 | 32 |
hematopoietic oligopotent progenitor cell | 3.86e-07 | 32 |
hematopoietic stem cell | 3.86e-07 | 32 |
hematopoietic multipotent progenitor cell | 3.86e-07 | 32 |
lymphoid lineage restricted progenitor cell | 4.27e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 4.32e-14 | 29 |
immune organ | 4.32e-14 | 29 |
mixed endoderm/mesoderm-derived structure | 3.31e-13 | 35 |
gland of gut | 1.05e-12 | 24 |
thymus | 2.00e-12 | 23 |
neck | 2.00e-12 | 23 |
respiratory system epithelium | 2.00e-12 | 23 |
hemolymphoid system gland | 2.00e-12 | 23 |
pharyngeal epithelium | 2.00e-12 | 23 |
thymic region | 2.00e-12 | 23 |
pharyngeal gland | 2.00e-12 | 23 |
entire pharyngeal arch endoderm | 2.00e-12 | 23 |
thymus primordium | 2.00e-12 | 23 |
early pharyngeal endoderm | 2.00e-12 | 23 |
pharynx | 3.44e-11 | 24 |
upper respiratory tract | 3.44e-11 | 24 |
chordate pharynx | 3.44e-11 | 24 |
pharyngeal arch system | 3.44e-11 | 24 |
pharyngeal region of foregut | 3.44e-11 | 24 |
hemolymphoid system | 4.27e-11 | 48 |
immune system | 4.27e-11 | 48 |
hematopoietic system | 8.32e-11 | 45 |
blood island | 8.32e-11 | 45 |
endocrine system | 3.28e-10 | 72 |
gland | 4.81e-09 | 65 |
gut epithelium | 2.26e-08 | 55 |
endocrine gland | 4.70e-08 | 60 |
segment of respiratory tract | 6.96e-08 | 27 |
unilaminar epithelium | 3.44e-07 | 66 |