FFCP PHASE1:Mm9::chr10:78054690..78054698,-: Difference between revisions
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{{FFCP|EntrezGene=71709|HGNC=|MCL_coexpression_id=52|UniProt=G3X960,Q9DBZ9|association_with_transcript=10bp_to_ENSMUST00000040580,NM_027875,uc007fyb.2_5end|description=CAGE_peak_4_at_Syde1_5end|id=chr10:78054690..78054698,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000333,1.47e-09,10;CL:0000095,1.47e-09,10;CL:0000243,1.47e-09,10;CL:0000123,1.47e-09,10;CL:0000125,1.47e-09,10;CL:0000030,1.47e-09,10;CL:0000339,1.47e-09,10;CL:0002453,3.30e-09,8;CL:0000680,3.62e-09,6;CL:0000187,3.62e-09,6;CL:0000056,3.62e-09,6;CL:0000222,8.83e-08,7;CL:0002293,2.44e-07,3;CL:0000192,3.39e-07,3;CL:0000359,3.39e-07,3;CL:0002539,3.39e-07,3;CL:0000514,3.39e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001135,3.39e-07,3;UBERON:0004237,3.39e-07,3;UBERON:0004695,3.39e-07,3;UBERON:0002111,3.39e-07,3;UBERON:0004178,3.39e-07,3|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01434908760924,1.31790010585369,2.38610777810186,0.782391344348039,1.52617609466313,2.19686182734472,1.36100929351998,0.55994568650145,1.43752564364972,0.167782606057736,0,0,2.82985379639542,0.85960031981627,1.54701627683233,0.404632921719196,0,0,2.03306719241479,1.77858959222228,0,0.988866362566974,0.7104801149461,2.09720077362883,1.53687322128622,0.725827286159344,0,0.210324961351382,0.571301968807607,0,0.122490799214954,0.575072826109418,0,1.10115880999389,0.510749352340751,0.614426133024974,0.395658863190582,0.274462930807229,0.52091337055676,0,0.56276261003168,0,0,0.284743361598206,0,1.28734528666413,0.302286240427142,0.869593466105033,0,0,0,0.649776417447669,0,0.280888840263504,2.55645483867087,1.03914401841148,1.7666978725517,0.422530259330042,1.28326477414318,2.54805239706646,14.2213340630666,0,0.253359865475099,0.505524445014783,0.45673551887624,0,1.63286352971307,0.693941307064543,0,0.461230994512117,0.301445281105245,0.352766121407114,1.63366568728578,0.247194967734374,0.578397427679647,0,0.485300549842228,0.220841518460394,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,1.52759045775474,0.248813941220186,0,0,0.260240885925407,0.459804208866946,0.360124259610698,0.150704817835715,0.544291993210623,0.12811372028485,0.374806898238915,0.258703370739016,0.646703978798527,1.70195472151037,0.879755620819744,0.657587197282725,0.278047249225598,1.0447564995665,1.02891068203972,0.995171334092466,0,0,0,0.621377317606506,0,0.900310307305074,0.710234206755631,0.393528463494808,0.617068451549513,1.39520366850245,0,0.934122738937356,0.658239399653922,0.164167464079095,0.486412857275134,0.292399974850665,0.439100230582101,1.07365135008297,0,0.411618449517138,0,0,1.06644125267617,0.464473343720877,0.644337306610467,0.403367049246685,0.667134131534611,0.190225626112559,0,0.329397909448022,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0.398282546508734,0.379335801906163,0.342745537829186,0,0.203651327845314,0.775809948670503,1.1221731182451,0.69560190836683,0.738050739898011,0.941992367048249,0.370191491765402,0.296452627087149,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.923765950833023,0.568474235311454,0.488894929326078,0.678980343100753,0.234690248288502,0.670025029767263,0.476087281772027,1.17080188714679,0.788175720530955,0.8858587585951,1.11618338060241,1.14704320301017,1.38147985492716,0.578596234326046,0,0,0,0.275936746304732,0.80275294993896,0.234423373184406,0.655739781506702,0.504941854408746,0.94652465824877,1.17131623288992,0.430846795465598,0.955875191810208,0.445597348164788,1.41538265394416,1.21443210502468,0.584511715822624,0,0,0.99358059645788,1.24645922567079,0.81443479676788,0.494910368917606,0,0,0,0,0,0.307435147943927,0,0.363533729477506,0.356497378384721,0.316036757935816,1.05418608574999,0,0.340439605753788,0.540183282093931,0.258717367565509,0,0.177340233642274,0.356737635204141,0.329098041204242,0,0.469343416127421,0.21183207086382,0.220528398054962,0.49465875882444,0.645857706783622,0.663442174209714,0.358117032009409,0,0.291480836629851,0.18542530201051,0.170870880797853,1.03193433981611,0.555583582109135,0.188368457004691,0,0,0,0.139951452323658,0.138199973804424,0,0.790839983952838,0.406638934253697,0.648032044930808,0.627264888043406,0.436725127492355,0,0.495920734352016,0.26175594198403,0.518459893167171,0,0,0.897099276263873,0.66183396182839,0.777804753376191,0.645799117388655,0.675824501963113,1.05621514781179,0.781226309063701,0,0,0,0,0.608175645870493,0.102710957164827,0,0.358053391334963,0.39736270956253,0,0.147689527174577,0,0.0762068066549998,0.100826185136841,0.194915761479505,0,0,0.453460767230423,0,0,0.503653849092235,0.19318959403219,0.187682475451182,0,0.214368379079066,0.501572104035363,0,0,0,0,0,0.755393897389701,0,0,0,0,0.518936737920883,0,1.02440163452481,0,0.628839487883947,0.735374033800057,1.11123363900808,0.618105171716683,0,1.01078884705519,0,0.188626341386076,0.655490552289177,0.640251524048693,1.32101578597911,0,1.15884325944855,0.77163688185482,0,0.147198920134397,0,0.532427418478012,0.953744759789284,0.581385666529314,0.470546902076653,0.338458431566706,0.914639864363863,0,0.814824683075171,0,0.118635018124174,0.985044823755635,0,0.464810523557898,0,0,0,0.644613162144895,0.57386499620653,0,0|short_description=p4@Syde1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:71709 | |||
|HGNC= | |||
|MCL_coexpression_id=52 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G3X960,uniprot:Q9DBZ9 | |||
|association_with_transcript=10bp_to_ENSMUST00000040580,NM_027875,uc007fyb.2_5end | |||
|cluster_id=chr10:78054690..78054698,- | |||
|description=CAGE_peak_4_at_Syde1_5end | |||
|id=chr10:78054690..78054698,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,1.47e-09,10;CL:0000095,1.47e-09,10;CL:0000243,1.47e-09,10;CL:0000123,1.47e-09,10;CL:0000125,1.47e-09,10;CL:0000030,1.47e-09,10;CL:0000339,1.47e-09,10;CL:0002453,3.30e-09,8;CL:0000680,3.62e-09,6;CL:0000187,3.62e-09,6;CL:0000056,3.62e-09,6;CL:0000222,8.83e-08,7;CL:0002293,2.44e-07,3;CL:0000192,3.39e-07,3;CL:0000359,3.39e-07,3;CL:0002539,3.39e-07,3;CL:0000514,3.39e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,3.39e-07,3;UBERON:0004237,3.39e-07,3;UBERON:0004695,3.39e-07,3;UBERON:0002111,3.39e-07,3;UBERON:0004178,3.39e-07,3 | |||
|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01434908760924,1.31790010585369,2.38610777810186,0.782391344348039,1.52617609466313,2.19686182734472,1.36100929351998,0.55994568650145,1.43752564364972,0.167782606057736,0,0,2.82985379639542,0.85960031981627,1.54701627683233,0.404632921719196,0,0,2.03306719241479,1.77858959222228,0,0.988866362566974,0.7104801149461,2.09720077362883,1.53687322128622,0.725827286159344,0,0.210324961351382,0.571301968807607,0,0.122490799214954,0.575072826109418,0,1.10115880999389,0.510749352340751,0.614426133024974,0.395658863190582,0.274462930807229,0.52091337055676,0,0.56276261003168,0,0,0.284743361598206,0,1.28734528666413,0.302286240427142,0.869593466105033,0,0,0,0.649776417447669,0,0.280888840263504,2.55645483867087,1.03914401841148,1.7666978725517,0.422530259330042,1.28326477414318,2.54805239706646,14.2213340630666,0,0.253359865475099,0.505524445014783,0.45673551887624,0,1.63286352971307,0.693941307064543,0,0.461230994512117,0.301445281105245,0.352766121407114,1.63366568728578,0.247194967734374,0.578397427679647,0,0.485300549842228,0.220841518460394,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,1.52759045775474,0.248813941220186,0,0,0.260240885925407,0.459804208866946,0.360124259610698,0.150704817835715,0.544291993210623,0.12811372028485,0.374806898238915,0.258703370739016,0.646703978798527,1.70195472151037,0.879755620819744,0.657587197282725,0.278047249225598,1.0447564995665,1.02891068203972,0.995171334092466,0,0,0,0.621377317606506,0,0.900310307305074,0.710234206755631,0.393528463494808,0.617068451549513,1.39520366850245,0,0.934122738937356,0.658239399653922,0.164167464079095,0.486412857275134,0.292399974850665,0.439100230582101,1.07365135008297,0,0.411618449517138,0,0,1.06644125267617,0.464473343720877,0.644337306610467,0.403367049246685,0.667134131534611,0.190225626112559,0,0.329397909448022,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0.398282546508734,0.379335801906163,0.342745537829186,0,0.203651327845314,0.775809948670503,1.1221731182451,0.69560190836683,0.738050739898011,0.941992367048249,0.370191491765402,0.296452627087149,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.923765950833023,0.568474235311454,0.488894929326078,0.678980343100753,0.234690248288502,0.670025029767263,0.476087281772027,1.17080188714679,0.788175720530955,0.8858587585951,1.11618338060241,1.14704320301017,1.38147985492716,0.578596234326046,0,0,0,0.275936746304732,0.80275294993896,0.234423373184406,0.655739781506702,0.504941854408746,0.94652465824877,1.17131623288992,0.430846795465598,0.955875191810208,0.445597348164788,1.41538265394416,1.21443210502468,0.584511715822624,0,0,0.99358059645788,1.24645922567079,0.81443479676788,0.494910368917606,0,0,0,0,0,0.307435147943927,0,0.363533729477506,0.356497378384721,0.316036757935816,1.05418608574999,0,0.340439605753788,0.540183282093931,0.258717367565509,0,0.177340233642274,0.356737635204141,0.329098041204242,0,0.469343416127421,0.21183207086382,0.220528398054962,0.49465875882444,0.645857706783622,0.663442174209714,0.358117032009409,0,0.291480836629851,0.18542530201051,0.170870880797853,1.03193433981611,0.555583582109135,0.188368457004691,0,0,0,0.139951452323658,0.138199973804424,0,0.790839983952838,0.406638934253697,0.648032044930808,0.627264888043406,0.436725127492355,0,0.495920734352016,0.26175594198403,0.518459893167171,0,0,0.897099276263873,0.66183396182839,0.777804753376191,0.645799117388655,0.675824501963113,1.05621514781179,0.781226309063701,0,0,0,0,0.608175645870493,0.102710957164827,0,0.358053391334963,0.39736270956253,0,0.147689527174577,0,0.0762068066549998,0.100826185136841,0.194915761479505,0,0,0.453460767230423,0,0,0.503653849092235,0.19318959403219,0.187682475451182,0,0.214368379079066,0.501572104035363,0,0,0,0,0,0.755393897389701,0,0,0,0,0.518936737920883,0,1.02440163452481,0,0.628839487883947,0.735374033800057,1.11123363900808,0.618105171716683,0,1.01078884705519,0,0.188626341386076,0.655490552289177,0.640251524048693,1.32101578597911,0,1.15884325944855,0.77163688185482,0,0.147198920134397,0,0.532427418478012,0.953744759789284,0.581385666529314,0.470546902076653,0.338458431566706,0.914639864363863,0,0.814824683075171,0,0.118635018124174,0.985044823755635,0,0.464810523557898,0,0,0,0.644613162144895,0.57386499620653,0,0 | |||
|short_description=p4@Syde1 | |||
}} |
Revision as of 18:24, 4 August 2015
Short description: | p4@Syde1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Syde1_5end |
Coexpression cluster: | MCL_coexpression_mm9:52 |
Association with transcript: | 10bp_to_ENSMUST00000040580, NM_027875, uc007fyb.2_5end |
EntrezGene: | 71709 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 1.47e-09 | 10 |
neuron associated cell | 1.47e-09 | 10 |
glial cell (sensu Vertebrata) | 1.47e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 1.47e-09 | 10 |
glial cell | 1.47e-09 | 10 |
glioblast | 1.47e-09 | 10 |
glioblast (sensu Vertebrata) | 1.47e-09 | 10 |
oligodendrocyte precursor cell | 3.30e-09 | 8 |
muscle precursor cell | 3.62e-09 | 6 |
muscle cell | 3.62e-09 | 6 |
myoblast | 3.62e-09 | 6 |
mesodermal cell | 8.83e-08 | 7 |
epithelial cell of thymus | 2.44e-07 | 3 |
smooth muscle cell | 3.39e-07 | 3 |
vascular associated smooth muscle cell | 3.39e-07 | 3 |
aortic smooth muscle cell | 3.39e-07 | 3 |
smooth muscle myoblast | 3.39e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 3.39e-07 | 3 |
blood vessel smooth muscle | 3.39e-07 | 3 |
arterial system smooth muscle | 3.39e-07 | 3 |
artery smooth muscle tissue | 3.39e-07 | 3 |
aorta smooth muscle tissue | 3.39e-07 | 3 |