FFCP PHASE1:Mm9::chr1:132748110..132748121,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=430|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:132748110..132748121,+|id=chr1:132748110..132748121,+|ontology_enrichment_celltype=CL:0000066!5.62e-14!25;CL:0002563!1.10e-13!9;CL:0002251!1.10e-13!9;CL:0000223!9.19e-12!20;CL:0000239!6.32e-10!6;CL:0000677!6.32e-10!6;CL:0000212!6.32e-10!6;CL:0000584!6.32e-10!6;CL:0000075!2.15e-08!7;CL:0002076!1.67e-07!15|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!5.27e-24!15;UBERON:0000160!8.56e-21!43;UBERON:0001242!9.20e-21!13;UBERON:0000060!9.20e-21!13;UBERON:0001262!9.20e-21!13;UBERON:0004786!9.20e-21!13;UBERON:0005409!9.07e-15!59;UBERON:0001007!2.59e-14!128;UBERON:0001555!2.59e-14!128;UBERON:0007026!2.59e-14!128;UBERON:0004119!6.18e-14!130;UBERON:0000925!6.18e-14!130;UBERON:0006595!6.18e-14!130;UBERON:0003350!1.10e-13!9;UBERON:0004808!1.10e-13!9;UBERON:0001277!1.10e-13!9;UBERON:0004923!1.64e-13!24;UBERON:0004921!1.38e-12!126;UBERON:0004185!1.38e-12!126;UBERON:0000485!7.19e-11!11;UBERON:0000331!8.94e-07!3;UBERON:0002116!8.94e-07!3;UBERON:0001204!8.94e-07!3;UBERON:0001168!8.94e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.11e-22,31;UBERON:0005409,8.17e-16,47;UBERON:0000344,4.83e-15,15;UBERON:0002108,5.92e-13,4;UBERON:0001007,7.75e-12,116;UBERON:0001555,7.75e-12,116;UBERON:0007026,7.75e-12,116;UBERON:0004119,1.50e-11,118;UBERON:0000925,1.50e-11,118;UBERON:0006595,1.50e-11,118;UBERON:0001242,8.48e-11,13;UBERON:0001262,8.48e-11,13;UBERON:0004786,8.48e-11,13;UBERON:0000331,3.71e-10,3;UBERON:0002116,3.71e-10,3;UBERON:0001204,3.71e-10,3;UBERON:0001168,3.71e-10,3;UBERON:0004921,8.54e-10,114;UBERON:0004923,8.03e-09,24;UBERON:0001155,2.55e-07,2;UBERON:0000059,2.55e-07,2;UBERON:0001962,8.30e-07,2;UBERON:0001961,8.30e-07,2;UBERON:0001744,8.30e-07,2|phase1_expression=0,0.348975407639361,0.909998478779072,4.83942738090928,2.00358291978539,0.839396359559449,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,2.87986361028132,3.67054849707472,1.72269589234506,1.7230479846363,0.861884930743556,8.93110071444957,15.6258680451157,1.55211357458713,0,0,0,0.577703239502549,0.997407872150954,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0.679971333707751,4.31762553310254,3.89865850468601,1.79210754838934,0.983110940922263,0,0,0,0,0,0,0,0,0,0,3.53970027129086,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,3.72783522436244,0,0,7.40825460104915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5734010554815,5.81791246659797,0,0,0,0,0,0,5.69434873853414,0.658795818896044,1.25667604400135,0.596869416123452,0.58489226135736,5.39291645192533,14.0489732418551,7.36822711041159,0,0,0,0,0,0,0,0,0,0,3.55743152504579,0,0,0,0,0,0,0,0,0,2.87536413054709,0,0,0,0,4.3419916922703,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0.433947175744535,0,0,3.44234991113325,1.10374698521893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661585194164886,0,0,0,0,0.164140899745061,4.37221254944776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.05498395837992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.563047426353546,0.915758121336325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:132748110..132748121,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=430 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:132748110..132748121,+ | |||
|description=CAGE_peak_at_chr1:132748110..132748121,+ | |||
|id=chr1:132748110..132748121,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.62e-14!25;CL:0002563!1.10e-13!9;CL:0002251!1.10e-13!9;CL:0000223!9.19e-12!20;CL:0000239!6.32e-10!6;CL:0000677!6.32e-10!6;CL:0000212!6.32e-10!6;CL:0000584!6.32e-10!6;CL:0000075!2.15e-08!7;CL:0002076!1.67e-07!15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.27e-24!15;UBERON:0000160!8.56e-21!43;UBERON:0001242!9.20e-21!13;UBERON:0000060!9.20e-21!13;UBERON:0001262!9.20e-21!13;UBERON:0004786!9.20e-21!13;UBERON:0005409!9.07e-15!59;UBERON:0001007!2.59e-14!128;UBERON:0001555!2.59e-14!128;UBERON:0007026!2.59e-14!128;UBERON:0004119!6.18e-14!130;UBERON:0000925!6.18e-14!130;UBERON:0006595!6.18e-14!130;UBERON:0003350!1.10e-13!9;UBERON:0004808!1.10e-13!9;UBERON:0001277!1.10e-13!9;UBERON:0004923!1.64e-13!24;UBERON:0004921!1.38e-12!126;UBERON:0004185!1.38e-12!126;UBERON:0000485!7.19e-11!11;UBERON:0000331!8.94e-07!3;UBERON:0002116!8.94e-07!3;UBERON:0001204!8.94e-07!3;UBERON:0001168!8.94e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.11e-22,31;UBERON:0005409,8.17e-16,47;UBERON:0000344,4.83e-15,15;UBERON:0002108,5.92e-13,4;UBERON:0001007,7.75e-12,116;UBERON:0001555,7.75e-12,116;UBERON:0007026,7.75e-12,116;UBERON:0004119,1.50e-11,118;UBERON:0000925,1.50e-11,118;UBERON:0006595,1.50e-11,118;UBERON:0001242,8.48e-11,13;UBERON:0001262,8.48e-11,13;UBERON:0004786,8.48e-11,13;UBERON:0000331,3.71e-10,3;UBERON:0002116,3.71e-10,3;UBERON:0001204,3.71e-10,3;UBERON:0001168,3.71e-10,3;UBERON:0004921,8.54e-10,114;UBERON:0004923,8.03e-09,24;UBERON:0001155,2.55e-07,2;UBERON:0000059,2.55e-07,2;UBERON:0001962,8.30e-07,2;UBERON:0001961,8.30e-07,2;UBERON:0001744,8.30e-07,2 | |||
|phase1_expression=0,0.348975407639361,0.909998478779072,4.83942738090928,2.00358291978539,0.839396359559449,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,2.87986361028132,3.67054849707472,1.72269589234506,1.7230479846363,0.861884930743556,8.93110071444957,15.6258680451157,1.55211357458713,0,0,0,0.577703239502549,0.997407872150954,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0.679971333707751,4.31762553310254,3.89865850468601,1.79210754838934,0.983110940922263,0,0,0,0,0,0,0,0,0,0,3.53970027129086,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,3.72783522436244,0,0,7.40825460104915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5734010554815,5.81791246659797,0,0,0,0,0,0,5.69434873853414,0.658795818896044,1.25667604400135,0.596869416123452,0.58489226135736,5.39291645192533,14.0489732418551,7.36822711041159,0,0,0,0,0,0,0,0,0,0,3.55743152504579,0,0,0,0,0,0,0,0,0,2.87536413054709,0,0,0,0,4.3419916922703,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0.433947175744535,0,0,3.44234991113325,1.10374698521893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661585194164886,0,0,0,0,0.164140899745061,4.37221254944776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.05498395837992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.563047426353546,0.915758121336325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:132748110..132748121,+ | |||
}} |
Latest revision as of 17:55, 4 August 2015
Short description: | p@chr1:132748110..132748121, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:132748110..132748121, + |
Coexpression cluster: | MCL_coexpression_mm9:430 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.11e-22 | 31 |
gastrointestinal system | 8.17e-16 | 47 |
mucosa | 4.83e-15 | 15 |
small intestine | 5.92e-13 | 4 |
digestive system | 7.75e-12 | 116 |
digestive tract | 7.75e-12 | 116 |
primitive gut | 7.75e-12 | 116 |
endoderm-derived structure | 1.50e-11 | 118 |
endoderm | 1.50e-11 | 118 |
presumptive endoderm | 1.50e-11 | 118 |
intestinal mucosa | 8.48e-11 | 13 |
wall of intestine | 8.48e-11 | 13 |
gastrointestinal system mucosa | 8.48e-11 | 13 |
ileal mucosa | 3.71e-10 | 3 |
ileum | 3.71e-10 | 3 |
mucosa of small intestine | 3.71e-10 | 3 |
wall of small intestine | 3.71e-10 | 3 |
subdivision of digestive tract | 8.54e-10 | 114 |
organ component layer | 8.03e-09 | 24 |
colon | 2.55e-07 | 2 |
large intestine | 2.55e-07 | 2 |
gut-associated lymphoid tissue | 8.30e-07 | 2 |
mucosa-associated lymphoid tissue | 8.30e-07 | 2 |
lymphoid tissue | 8.30e-07 | 2 |