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FFCP PHASE1:Mm9::chr12:111934542..111934628,-: Difference between revisions

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{{FFCP|EntrezGene=15519|HGNC=|MCL_coexpression_id=0|UniProt=P07901,Q80Y52|association_with_transcript=0bp_to_ENSMUST00000094361,NM_010480,uc007pbr.1_5end|description=CAGE_peak_1_at_Hsp90aa1_5end|id=chr12:111934542..111934628,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.15e-14!71;UBERON:0003075!2.15e-14!71;UBERON:0007284!2.15e-14!71;UBERON:0000033!1.60e-13!63;UBERON:0003056!5.43e-12!49;UBERON:0001049!1.55e-11!52;UBERON:0005068!1.55e-11!52;UBERON:0006241!1.55e-11!52;UBERON:0007135!1.55e-11!52;UBERON:0000073!1.60e-11!75;UBERON:0001016!1.60e-11!75;UBERON:0001017!5.07e-11!73;UBERON:0005743!5.07e-11!73;UBERON:0000955!5.14e-11!50;UBERON:0006238!5.14e-11!50;UBERON:0004121!5.77e-11!102;UBERON:0000924!5.77e-11!102;UBERON:0006601!5.77e-11!102;UBERON:0002616!1.76e-10!49;UBERON:0002020!2.69e-09!34;UBERON:0000153!1.68e-08!94;UBERON:0007811!2.16e-08!86;UBERON:0003080!2.48e-08!40;UBERON:0002780!8.00e-08!39;UBERON:0001890!8.00e-08!39;UBERON:0006240!8.00e-08!39;UBERON:0002791!3.39e-07!29;UBERON:0003528!3.39e-07!29;UBERON:0001893!3.39e-07!29;UBERON:0002021!9.02e-07!10;UBERON:0000411!9.02e-07!10;UBERON:0001950!9.02e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.46e-15,64;UBERON:0003075,1.46e-15,64;UBERON:0007284,1.46e-15,64;UBERON:0000073,1.05e-12,54;UBERON:0010371,3.25e-12,73;UBERON:0003056,5.25e-12,49;UBERON:0001016,1.24e-11,75;UBERON:0001049,1.40e-11,52;UBERON:0005068,1.40e-11,52;UBERON:0006241,1.40e-11,52;UBERON:0007135,1.40e-11,52;UBERON:0004121,1.78e-11,95;UBERON:0000924,1.78e-11,95;UBERON:0006601,1.78e-11,95;UBERON:0001017,3.96e-11,73;UBERON:0000955,2.00e-09,47;UBERON:0006238,2.00e-09,47;UBERON:0002020,2.27e-09,34;UBERON:0010314,2.52e-09,92;UBERON:0002616,6.45e-09,46;UBERON:0003080,2.43e-08,40;UBERON:0002780,7.83e-08,39;UBERON:0001890,7.83e-08,39;UBERON:0006240,7.83e-08,39;UBERON:0003528,2.91e-07,29;UBERON:0002791,2.91e-07,29;UBERON:0001893,2.91e-07,29;UBERON:0002021,8.87e-07,10;UBERON:0000411,8.87e-07,10;UBERON:0001950,8.87e-07,10|phase1_expression=4.48416771893423,1.39590163055744,0.909998478779072,0.30246421130683,0.500895729946347,1.84667199103079,0.934450562382103,0.903863264091034,1.12630977721333,1.87251621057595,1.88339765048055,3.35043067780413,0.856003649656029,0.611942816932982,5.66286595086627,3.23960427823721,6.29605690315332,2.05050407482854,2.33094537129756,1.69755860719212,131.476926573554,1.98581902401771,2.35079810225042,1.75991665072747,1.14704640533585,1.14846392823004,0.430761996159075,1.29282739611533,0.380046838912748,1.26015064879965,1.77384408524244,2.54012269383853,1.23012957516914,0,1.44425809875637,1.49611180822643,1.42918549383658,1.25559489221072,0,2.09409497589519,0.588231488031014,2.04913645487534,0.971020706062307,0.755380907853464,1.01376931219515,1.28482726513177,0.782391344348039,0,0,1.74986909166855,0.55994568650145,0,1.67782606057736,0,0.336093799142464,1.28629718017973,1.14613375975503,2.57836046138721,3.84401275633236,4.23192783417626,3.80298842103708,0,0,0,0,0,0.299600110518405,1.53687322128622,3.62913643079672,1.89008313664367,3.36519938162211,9.14083150092171,9.05561017901615,4.5321595709533,2.01275489138296,2.75765635983006,47.3498288297371,33.8371445925747,42.3954031787232,6.06676923558892,6.95306091378313,6.25096044668112,16.7509799400829,27.0126052815206,34.6852022453359,25.0434297652618,23.2065839702538,10.4383689662168,5.30083353332288,7.48158445057177,1.73918693221007,3.44169550792555,0.679971333707751,0.539703191637817,1.94932925234301,0.448026887097336,17.1342192560737,3.74946709671727,1.03914401841148,2.47337702157238,4.08445917352373,2.56652954828636,0,0,3.030874574157,2.78695852022608,4.04419556011827,15.7573754012303,4.66088190564909,2.52351636410202,3.12273588179045,4.26251669636998,3.68984795609694,2.86373017049983,4.35078216402108,2.76466500925286,3.46072954828123,2.89198713839823,4.42305275974937,3.39710384889559,3.3126227769059,2.90925151881133,0,40.110969190582,30.7886659015779,1.78819938646014,2.75574786363617,1.19980546198682,3.81210681219194,34.4518470631092,15.0975198930147,10.3036568732549,32.678972196148,27.105838477015,36.1551197533635,29.6901511413996,4.68461073711455,2.98576729464223,4.0435641349388,8.20723237957248,9.23855145035196,10.8053989083732,11.884100567153,11.4535661555143,12.654788842147,17.6796933993093,12.7434345401231,11.9003550539947,8.83828771024653,5.8622884852024,2.99116911078713,3.72632745126877,2.50242524303038,2.78601733217733,3.2925141825271,6.36909653819178,2.1066395619397,2.57347907114715,2.27330799516474,6.21377317606506,4.92504725960302,3.6012412292203,4.02466050494857,2.95146347621106,2.1597395804233,2.09280550275367,1.87791380979733,2.80236821681207,1.97471819896177,1.64167464079095,2.26992666728396,1.60819986167866,1.97595103761946,2.14730270016595,22.5010244963616,20.5809224758569,0.991256348951394,1.05780226665418,5.33220626338085,4.18026009348789,4.25262622362908,2.4202022954801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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:15519
|HGNC=
|MCL_coexpression_id=0
|TSSclassifier=NA
|UniProt=uniprot:P07901,uniprot:Q80Y52
|association_with_transcript=0bp_to_ENSMUST00000094361,NM_010480,uc007pbr.1_5end
|cluster_id=chr12:111934542..111934628,-
|description=CAGE_peak_1_at_Hsp90aa1_5end
|id=chr12:111934542..111934628,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!2.15e-14!71;UBERON:0003075!2.15e-14!71;UBERON:0007284!2.15e-14!71;UBERON:0000033!1.60e-13!63;UBERON:0003056!5.43e-12!49;UBERON:0001049!1.55e-11!52;UBERON:0005068!1.55e-11!52;UBERON:0006241!1.55e-11!52;UBERON:0007135!1.55e-11!52;UBERON:0000073!1.60e-11!75;UBERON:0001016!1.60e-11!75;UBERON:0001017!5.07e-11!73;UBERON:0005743!5.07e-11!73;UBERON:0000955!5.14e-11!50;UBERON:0006238!5.14e-11!50;UBERON:0004121!5.77e-11!102;UBERON:0000924!5.77e-11!102;UBERON:0006601!5.77e-11!102;UBERON:0002616!1.76e-10!49;UBERON:0002020!2.69e-09!34;UBERON:0000153!1.68e-08!94;UBERON:0007811!2.16e-08!86;UBERON:0003080!2.48e-08!40;UBERON:0002780!8.00e-08!39;UBERON:0001890!8.00e-08!39;UBERON:0006240!8.00e-08!39;UBERON:0002791!3.39e-07!29;UBERON:0003528!3.39e-07!29;UBERON:0001893!3.39e-07!29;UBERON:0002021!9.02e-07!10;UBERON:0000411!9.02e-07!10;UBERON:0001950!9.02e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.46e-15,64;UBERON:0003075,1.46e-15,64;UBERON:0007284,1.46e-15,64;UBERON:0000073,1.05e-12,54;UBERON:0010371,3.25e-12,73;UBERON:0003056,5.25e-12,49;UBERON:0001016,1.24e-11,75;UBERON:0001049,1.40e-11,52;UBERON:0005068,1.40e-11,52;UBERON:0006241,1.40e-11,52;UBERON:0007135,1.40e-11,52;UBERON:0004121,1.78e-11,95;UBERON:0000924,1.78e-11,95;UBERON:0006601,1.78e-11,95;UBERON:0001017,3.96e-11,73;UBERON:0000955,2.00e-09,47;UBERON:0006238,2.00e-09,47;UBERON:0002020,2.27e-09,34;UBERON:0010314,2.52e-09,92;UBERON:0002616,6.45e-09,46;UBERON:0003080,2.43e-08,40;UBERON:0002780,7.83e-08,39;UBERON:0001890,7.83e-08,39;UBERON:0006240,7.83e-08,39;UBERON:0003528,2.91e-07,29;UBERON:0002791,2.91e-07,29;UBERON:0001893,2.91e-07,29;UBERON:0002021,8.87e-07,10;UBERON:0000411,8.87e-07,10;UBERON:0001950,8.87e-07,10
|phase1_expression=4.48416771893423,1.39590163055744,0.909998478779072,0.30246421130683,0.500895729946347,1.84667199103079,0.934450562382103,0.903863264091034,1.12630977721333,1.87251621057595,1.88339765048055,3.35043067780413,0.856003649656029,0.611942816932982,5.66286595086627,3.23960427823721,6.29605690315332,2.05050407482854,2.33094537129756,1.69755860719212,131.476926573554,1.98581902401771,2.35079810225042,1.75991665072747,1.14704640533585,1.14846392823004,0.430761996159075,1.29282739611533,0.380046838912748,1.26015064879965,1.77384408524244,2.54012269383853,1.23012957516914,0,1.44425809875637,1.49611180822643,1.42918549383658,1.25559489221072,0,2.09409497589519,0.588231488031014,2.04913645487534,0.971020706062307,0.755380907853464,1.01376931219515,1.28482726513177,0.782391344348039,0,0,1.74986909166855,0.55994568650145,0,1.67782606057736,0,0.336093799142464,1.28629718017973,1.14613375975503,2.57836046138721,3.84401275633236,4.23192783417626,3.80298842103708,0,0,0,0,0,0.299600110518405,1.53687322128622,3.62913643079672,1.89008313664367,3.36519938162211,9.14083150092171,9.05561017901615,4.5321595709533,2.01275489138296,2.75765635983006,47.3498288297371,33.8371445925747,42.3954031787232,6.06676923558892,6.95306091378313,6.25096044668112,16.7509799400829,27.0126052815206,34.6852022453359,25.0434297652618,23.2065839702538,10.4383689662168,5.30083353332288,7.48158445057177,1.73918693221007,3.44169550792555,0.679971333707751,0.539703191637817,1.94932925234301,0.448026887097336,17.1342192560737,3.74946709671727,1.03914401841148,2.47337702157238,4.08445917352373,2.56652954828636,0,0,3.030874574157,2.78695852022608,4.04419556011827,15.7573754012303,4.66088190564909,2.52351636410202,3.12273588179045,4.26251669636998,3.68984795609694,2.86373017049983,4.35078216402108,2.76466500925286,3.46072954828123,2.89198713839823,4.42305275974937,3.39710384889559,3.3126227769059,2.90925151881133,0,40.110969190582,30.7886659015779,1.78819938646014,2.75574786363617,1.19980546198682,3.81210681219194,34.4518470631092,15.0975198930147,10.3036568732549,32.678972196148,27.105838477015,36.1551197533635,29.6901511413996,4.68461073711455,2.98576729464223,4.0435641349388,8.20723237957248,9.23855145035196,10.8053989083732,11.884100567153,11.4535661555143,12.654788842147,17.6796933993093,12.7434345401231,11.9003550539947,8.83828771024653,5.8622884852024,2.99116911078713,3.72632745126877,2.50242524303038,2.78601733217733,3.2925141825271,6.36909653819178,2.1066395619397,2.57347907114715,2.27330799516474,6.21377317606506,4.92504725960302,3.6012412292203,4.02466050494857,2.95146347621106,2.1597395804233,2.09280550275367,1.87791380979733,2.80236821681207,1.97471819896177,1.64167464079095,2.26992666728396,1.60819986167866,1.97595103761946,2.14730270016595,22.5010244963616,20.5809224758569,0.991256348951394,1.05780226665418,5.33220626338085,4.18026009348789,4.25262622362908,2.42020229548011,2.00140239460383,1.52180500890047,0.949058123089023,0.823494773620054,1.50801125280162,1.1937388322469,1.16978452271472,2.69645822596266,0.648414149624083,1.7922714592893,1.70701110857774,8.11164439529075,6.76246414038483,6.10953983535943,5.04276466635827,6.17195215034803,6.5133633237985,4.28069429140846,6.12295038581362,4.19550357334122,0.889357881261447,6.84064933435986,3.73462090715086,5.62155280962134,6.08580364165509,3.85883455603867,1.78238096246994,0.863088412352432,1.78348749452539,2.47105271869273,1.43768206527355,1.86070473834252,1.5601883655728,1.01031551178845,2.87035861635059,2.41221760681684,2.21703828199926,5.87423376488503,4.56301934037672,3.22515662972857,3.98973422090454,3.1826188913945,1.90434912708811,1.95133647857799,2.99506773801763,2.43611158613652,2.23236676120482,2.62181303545181,2.07221978239075,2.02508682014116,0,2.71952841909355,0.983528546038072,1.65562047782839,48.8073793562888,54.3862225787823,2.62295912602681,0.757412781613119,4.41711507182759,5.46614242015294,3.44677436372478,4.30143836314594,5.12436950389506,4.24614796183249,6.8817819284732,1.16902343164525,4.74345333535828,33.0960955914461,2.98074178937364,5.52003371368491,7.16702621155735,3.46437258242324,2.65490276679926,3.15614827001476,3.62788268357701,4.52652191414155,2.65771703592696,4.61152721915891,1.29214146584111,2.18120237686503,2.13898427030833,3.16036757935816,4.21674434299995,2.06271086496374,7.14923172082955,6.84232157318979,2.32845630808958,2.7863814554107,4.96552654198366,5.17269571046005,5.75921572107423,0.913394847343798,3.75474732901937,6.77862626764225,2.64634077665954,2.80306630000516,1.61464426695906,2.0506394475573,2.26807453605959,2.29797259643086,1.45740418314925,49.3231303347956,3.07567585436135,3.09580301944834,3.70389054739423,4.89757988212197,6.01454601972511,3.88922894451088,3.56954702987096,4.05859211738608,4.00779924032829,1.90934123603023,5.53587988766987,3.25311147402958,3.24016022465404,2.29997125615916,1.74690050996942,2.15782954215713,2.47960367176008,2.6175594198403,1.42576470620972,1.24267862617385,825.246462233655,9.71857549285862,8.76929999422617,9.72255941720238,5.55387240954244,5.57555214119568,6.10257640957921,11.5881902511116,20.2378534741622,290.867281474511,468.624820181547,0.948033361884535,3.85177909051312,3.80030541509861,4.93699127315621,4.11761400035207,3.9736270956253,4.20684073319891,4.57837534241189,4.74542314756294,5.18206285253999,3.2264379243789,4.0932309910696,3.17499077413087,1.5193997283604,1.36038230169127,7.32553646134413,12.0216567856697,8.39423081820392,2.51146472241848,1.87682475451182,0.915758121336325,2.57242054894879,1.00314420807073,23.7195773899168,24.8575627713876,21.1971339972577,23.7157391634289,17.8121455140367,21.9064230243013,18.2256075062588,28.3702358031259,27.6416869480365,20.7104124700728,18.0589984796467,11.5717213286299,7.0000778359195,4.132814190161,7.33646069197938,4.41224420280034,4.88942801163553,3.5025959730612,5.77654577265267,3.79045817645696,6.59046179714623,5.84741658296836,5.99305647807247,6.53056554529667,6.08815970929501,7.62069906052918,6.95305955669133,6.17309505483856,4.53294490883637,5.4463600449727,2.74295401908332,6.92155644021416,6.91464950847231,5.95920308192547,3.67026583619789,4.3153450024755,4.20734337607377,6.05060336307039,5.43216455383447,2.24456908663095,4.86403574309114,5.91026894253381,6.13846564754534,6.8172210121825,3.47231899766054,3.74715866906919,5.6143586026898,3.65280791882107,4.97349663378993,3.30887128679273,3.01428186306548
|short_description=p1@Hsp90aa1
}}

Revision as of 17:51, 4 August 2015

Short description:p1@Hsp90aa1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Hsp90aa1_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: 0bp_to_ENSMUST00000094361, NM_010480, uc007pbr.1_5end
EntrezGene:15519
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Hsp90aa1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.88
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.35
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.61
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.24
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A56.30
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.05
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.33
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3131.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.35
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C33.84
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.63
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.89
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.37
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.06
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.53
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.01
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D347.35
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F333.84
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D742.40
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.07
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.95
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E416.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E527.01
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I634.69
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D625.04
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F623.21
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.44
Mouse Schwann, donor1.CNhs12507.11728-123D95.30
Mouse Schwann, donor2.CNhs12573.11746-123F97.48
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A717.13
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.75
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.08
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B615.76
accessory axillary lymph node, adult.CNhs10475.1063-29H94.66
adrenal gland, adult.CNhs10508.49-24D72.52
adrenal gland, embryo E14.CNhs11038.406-44C53.12
adrenal gland, embryo E16.CNhs11004.1254-43D64.26
adrenal gland, embryo E17.CNhs11043.1263-45I13.69
adrenal gland, embryo E18.CNhs11026.1262-18F52.86
adrenal gland, neonate N00.CNhs11191.1311-23C14.35
adrenal gland, neonate N25.CNhs11223.1377-27I32.76
amnion, adult pregnant day17.5.CNhs10488.583-22A83.46
aorta, adult.CNhs10498.46-23H12.89
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F53.40
bone (os femoris), neonate N16.CNhs11225.1525-43A63.31
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B240.11
cerebellum, neonate N30.CNhs11135.1395-42I230.79
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.76
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.81
corpora quadrigemina, adult.CNhs10501.16-22A434.45
corpus striatum, adult.CNhs10487.19-21D815.10
corpus striatum, neonate N00.CNhs11226.630-43F110.30
cortex, adult.CNhs10473.12-14D532.68
cortex, neonate N30.CNhs11107.1392-42F227.11
diencephalon, adult.CNhs10482.20-12F236.16
diencephalon, neonate N30.CNhs11201.1388-42B229.69
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.68
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.99
epididymis, adult.CNhs10490.58-23B24.04
eyeball, adult.CNhs10484.31-12G48.21
eyeball, embryo E12.CNhs11016.345-16C69.24
eyeball, embryo E14.CNhs10521.399-16E210.81
eyeball, embryo E15.CNhs10593.426-16C911.88
eyeball, embryo E17.CNhs11023.1261-18D411.45
eyeball, neonate N00.CNhs11207.633-15C612.65
eyeball, neonate N01.CNhs11140.1532-43E717.68
eyeball, neonate N02.CNhs11205.1551-44G812.74
eyeball, neonate N16.CNhs11188.777-19A211.90
forelimb, embryo E11.CNhs10596.335-25E28.84
forelimb, embryo E12.CNhs10600.359-14H25.86
forelimb, embryo E13.CNhs10589.384-1E22.99
forelimb, embryo E14.CNhs10577.413-26A83.73
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B53.29
gonad, embryo E13.CNhs11044.1564-45I66.37
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.57
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E96.21
heart, embryo E12.CNhs11015.353-12F54.93
heart, embryo E13.CNhs11013.376-3I93.60
heart, embryo E14.CNhs10597.403-26D44.02
heart, embryo E15.CNhs11017.431-16C82.95
heart, embryo E16.CNhs11021.457-17C62.16
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E32.80
heart, neonate N03.CNhs11221.1349-25I21.97
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G12.27
heart, neonate N20.CNhs11127.821-26I61.61
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D22.15
hippocampus, adult.CNhs10478.13-16E822.50
hippocampus, neonate N00.CNhs11228.627-43G120.58
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I55.33
intestine, embryo E13.CNhs11010.381-16D54.18
intestine, embryo E15.CNhs10602.976-16D84.25
intestine, embryo E16.CNhs10585.463-22H42.42
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F88.11
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I26.11
kidney, embryo E18.CNhs11001.1288-20C75.04
kidney, neonate N00.CNhs11214.646-21G76.17
kidney, neonate N10.CNhs11206.758-6D56.51
kidney, neonate N20.CNhs11113.832-19I14.28
kidney, neonate N25.CNhs11122.1353-25F36.12
kidney, neonate N30.CNhs11203.1385-42H14.20
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F86.84
liver, embryo E13.CNhs10524.378-3H63.73
liver, embryo E14.CNhs10594.409-16E15.62
liver, embryo E15.CNhs10520.433-16D76.09
liver, embryo E16.CNhs10523.462-17F53.86
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F41.78
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H12.87
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B12.22
lung, embryo E12.CNhs10522.354-16G25.87
lung, embryo E14.CNhs10604.404-26F84.56
lung, embryo E15.CNhs11020.432-17C53.23
lung, embryo E16.CNhs10998.458-17B63.99
lung, embryo E17.CNhs10605.480-44A63.18
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C61.95
lung, neonate N06.CNhs11212.683-20E53.00
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E62.23
lung, neonate N20.CNhs11109.822-18A42.62
lung, neonate N25.CNhs11119.1359-25C72.07
lung, neonate N30.CNhs11133.1394-42H22.03
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C248.81
medulla oblongata, neonate N30.CNhs11200.1396-42A354.39
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.62
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.42
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.47
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.45
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.30
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.12
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.88
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.74
olfactory brain, adult.CNhs10489.18-22I933.10
ovary, adult.CNhs10507.91-2I72.98
ovary, embryo E18.CNhs11040.505-44H75.52
ovary, neonate N00.CNhs11217.1299-22I47.17
oviduct, adult pregnant day01.CNhs10500.988-6G63.46
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F43.16
pancreas, embryo E15.CNhs11042.1556-45F23.63
pancreas, embryo E16.CNhs11003.460-26E54.53
pancreas, embryo E17.CNhs10599.1558-45G32.66
pancreas, embryo E18.CNhs10580.1535-43I74.61
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B63.16
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G87.15
pituitary gland, embryo E12.CNhs11018.346-16E66.84
pituitary gland, embryo E13.CNhs11009.370-44C72.33
pituitary gland, embryo E14.CNhs11037.398-44A52.79
pituitary gland, embryo E15.CNhs10592.427-16B94.97
pituitary gland, embryo E16.CNhs11036.449-43F65.17
pituitary gland, embryo E17.CNhs11039.1265-44F55.76
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I73.75
placenta, adult pregnant day17.CNhs10464.577-18G36.78
prostate, adult.CNhs10470.859-1F82.65
skin, adult.CNhs10492.30-1C32.80
skin, neonate N00.CNhs11124.650-25G41.61
skin, neonate N03.CNhs11215.662-22H32.05
skin, neonate N06.CNhs11097.693-20I52.27
skin, neonate N10.CNhs11108.762-6C42.30
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C949.32
spleen, adult.CNhs10465.25-2G23.08
spleen, embryo E16.CNhs11035.461-43C13.10
spleen, embryo E18.CNhs11011.1271-21F23.70
spleen, neonate N10.CNhs11116.752-24D14.90
spleen, neonate N20.CNhs11112.824-19H16.01
spleen, neonate N25.CNhs11099.1354-25G33.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.57
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.01
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E35.54
stomach, embryo E15.CNhs10603.1252-16G83.25
stomach, embryo E16.CNhs11022.459-17D43.24
stomach, embryo E17.CNhs11006.1035-18D52.30
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B82.16
stomach, neonate N07.CNhs11210.718-18A92.48
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G5825.25
testis, embryo E13.CNhs11031.389-23F59.72
testis, embryo E15.CNhs11034.443-27C58.77
testis, embryo E16.CNhs11033.470-26G59.72
testis, embryo E17.CNhs11029.486-18I55.55
testis, embryo E18.CNhs11027.503-18G55.58
testis, neonate N00.CNhs11189.1300-22B76.10
testis, neonate N07.CNhs11222.726-26I411.59
testis, neonate N10.CNhs11204.763-44D920.24
testis, neonate N20.CNhs11110.839-18H3290.87
testis, neonate N30.CNhs11130.1391-42E2468.62
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I43.85
thymus, embryo E15.CNhs11005.430-45I23.80
thymus, embryo E16.CNhs11002.456-26C54.94
thymus, embryo E17.CNhs10581.478-18C14.12
thymus, embryo E18.CNhs10595.1273-19G43.97
thymus, neonate N02.CNhs11181.1541-43F84.21
thymus, neonate N03.CNhs11137.2104-43C74.58
thymus, neonate N06.CNhs11197.681-26C44.75
thymus, neonate N07.CNhs11211.713-19D35.18
thymus, neonate N10.CNhs11194.748-24E43.23
thymus, neonate N20.CNhs11186.820-7A24.09
thymus, neonate N25.CNhs11125.1362-25G73.17
thymus, neonate N30.CNhs11132.1393-42G21.52
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F712.02
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G58.39
urinary bladder, adult.CNhs10481.879-12E42.51
uterus, adult pregnant day19.CNhs10497.590-15F51.88
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D52.57
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A123.72
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A224.86
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A321.20
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D723.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A417.81
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A521.91
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A618.23
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A728.37
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A827.64
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A920.71
whole body, embryo E11.CNhs11014.324-5I818.06
whole body, embryo E12.CNhs10587.857-27C911.57
whole body, embryo E13.CNhs10512.372-23H27.00
whole body, embryo E14.5.CNhs10578.420-27D24.13
whole body, embryo E14.CNhs10519.395-14B17.34
whole body, embryo E16.CNhs10514.453-14F24.41
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.85
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.99
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.53
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.95
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.45
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.92
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.96
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.32
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.43
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.86
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.91
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.82
whole body, embryo E17.5.CNhs10513.490-9F93.47
whole body, embryo E17.CNhs10517.475-3I53.75
whole body, embryo E18.CNhs10516.493-3B35.61
whole body, neonate N00.CNhs10525.657-19C23.65
whole body, neonate N01.CNhs10576.659-23C64.97
whole body, neonate N06.CNhs10515.692-21D13.31
whole body, neonate N10.CNhs10518.761-6B43.01





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm1.46e-1564
neural plate1.46e-1564
presumptive neural plate1.46e-1564
regional part of nervous system1.05e-1254
ecto-epithelium3.25e-1273
pre-chordal neural plate5.25e-1249
nervous system1.24e-1175
neural tube1.40e-1152
neural rod1.40e-1152
future spinal cord1.40e-1152
neural keel1.40e-1152
ectoderm-derived structure1.78e-1195
ectoderm1.78e-1195
presumptive ectoderm1.78e-1195
central nervous system3.96e-1173
brain2.00e-0947
future brain2.00e-0947
gray matter2.27e-0934
structure with developmental contribution from neural crest2.52e-0992
regional part of brain6.45e-0946
anterior neural tube2.43e-0840
regional part of forebrain7.83e-0839
forebrain7.83e-0839
future forebrain7.83e-0839
brain grey matter2.91e-0729
regional part of telencephalon2.91e-0729
telencephalon2.91e-0729
occipital lobe8.87e-0710
visual cortex8.87e-0710
neocortex8.87e-0710
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