FFCP PHASE1:Mm9::chr10:76424613..76424689,-: Difference between revisions
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{{FFCP|EntrezGene=59093|HGNC=|MCL_coexpression_id=0|UniProt=P57722|association_with_transcript=0bp_to_ENSMUST00000105411_5end|description=CAGE_peak_1_at_Pcbp3_5end|id=chr10:76424613..76424689,-|ontology_enrichment_celltype=CL:0000221!2.35e-16!44;CL:0000133!2.35e-16!44;CL:0002319!2.41e-16!43;CL:0000540!6.64e-14!33;CL:0000047!6.64e-14!33;CL:0000031!6.64e-14!33;CL:0000404!6.64e-14!33;CL:0000055!5.16e-12!50;CL:0000393!3.10e-10!39;CL:0000211!3.10e-10!39;CL:0000117!2.44e-08!23;CL:0000337!2.44e-08!23;CL:0000107!3.53e-07!9|ontology_enrichment_celltype_v019_2=CL:0000221,2.33e-16,44;CL:0000133,2.33e-16,44;CL:0002319,2.39e-16,43;CL:0000540,6.60e-14,33;CL:0000047,6.60e-14,33;CL:0000031,6.60e-14,33;CL:0000404,6.60e-14,33;CL:0000393,3.09e-10,39;CL:0000211,3.09e-10,39;CL:0000117,2.43e-08,23;CL:0000337,2.43e-08,23;CL:0000107,3.52e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.14e-33!102;UBERON:0000924!1.14e-33!102;UBERON:0006601!1.14e-33!102;UBERON:0000073!1.38e-32!75;UBERON:0001016!1.38e-32!75;UBERON:0001017!3.31e-32!73;UBERON:0005743!3.31e-32!73;UBERON:0002346!1.93e-31!71;UBERON:0003075!1.93e-31!71;UBERON:0007284!1.93e-31!71;UBERON:0000033!2.95e-23!63;UBERON:0001049!2.77e-21!52;UBERON:0005068!2.77e-21!52;UBERON:0006241!2.77e-21!52;UBERON:0007135!2.77e-21!52;UBERON:0000955!2.76e-20!50;UBERON:0006238!2.76e-20!50;UBERON:0002616!1.48e-19!49;UBERON:0003056!2.51e-19!49;UBERON:0003080!4.42e-15!40;UBERON:0002780!1.60e-14!39;UBERON:0001890!1.60e-14!39;UBERON:0006240!1.60e-14!39;UBERON:0002020!7.60e-14!34;UBERON:0007811!1.44e-12!86;UBERON:0000153!5.58e-12!94;UBERON:0002791!1.81e-11!29;UBERON:0003528!1.81e-11!29;UBERON:0001893!1.81e-11!29;UBERON:0000956!5.15e-09!21;UBERON:0001869!5.15e-09!21;UBERON:0000203!5.15e-09!21;UBERON:0002619!1.90e-08!17;UBERON:0000010!3.52e-07!11;UBERON:0002410!3.53e-07!9;UBERON:0003076!5.50e-07!12;UBERON:0003057!5.50e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.36e-32,75;UBERON:0001017,3.25e-32,73;UBERON:0004121,5.23e-30,95;UBERON:0000924,5.23e-30,95;UBERON:0006601,5.23e-30,95;UBERON:0002346,4.19e-28,64;UBERON:0003075,4.19e-28,64;UBERON:0007284,4.19e-28,64;UBERON:0010371,5.24e-23,73;UBERON:0000073,3.50e-22,54;UBERON:0001049,2.74e-21,52;UBERON:0005068,2.74e-21,52;UBERON:0006241,2.74e-21,52;UBERON:0007135,2.74e-21,52;UBERON:0003056,2.49e-19,49;UBERON:0010314,7.46e-19,92;UBERON:0000955,7.75e-19,47;UBERON:0006238,7.75e-19,47;UBERON:0002616,4.04e-18,46;UBERON:0003080,4.38e-15,40;UBERON:0002780,1.58e-14,39;UBERON:0001890,1.58e-14,39;UBERON:0006240,1.58e-14,39;UBERON:0002020,7.55e-14,34;UBERON:0003528,1.80e-11,29;UBERON:0002791,1.80e-11,29;UBERON:0001893,1.80e-11,29;UBERON:0000956,5.13e-09,21;UBERON:0001869,5.13e-09,21;UBERON:0000203,5.13e-09,21;UBERON:0002619,1.89e-08,17;UBERON:0000010,3.50e-07,11;UBERON:0002410,3.52e-07,9;UBERON:0003076,5.48e-07,12;UBERON:0003057,5.48e-07,12|phase1_expression=26.9050063136054,0,0,0,0,1.00727563147134,0.934450562382103,5.93967287831251,6.47628121897667,5.61754863172784,6.67750076079469,5.2649624936922,5.47842335779858,4.19617931611188,1.66554880907831,2.63217847606774,4.19737126876888,5.0473946457318,5.34746291062381,6.36584477697045,110.216104035786,0.297872853602656,0.261199789138935,0.799962113967033,0.68822784320151,0,0,0.215471232685889,0.190023419456374,0,0,1.27006134691926,2.46025915033828,0,0,0.166234645358492,0.408338712524738,0.418531630736908,0.7813353445238,1.57057123192139,0.588231488031014,0,0,14.7299277031425,14.192770370732,10.0950713688925,50.0730460382745,46.2213331526547,78.6476534189409,51.9127830528337,19.5980990275508,40.250718022192,7.71799987865587,15.2326049822382,7.39406358113421,9.77585856936598,3.15186783932632,7.73508138416164,43.7003555456731,61.3629535955558,41.8328726314078,32.5290750786367,28.4574334755565,12.5985960419396,8.89979726310277,7.8152812644071,28.16241038873,40.3429220587632,30.5884356310009,24.3010688997043,26.9215950529769,50.845875223877,55.2171352379034,34.542405378617,31.0539326099086,37.6879702510109,73.7776402695904,54.2671186862048,47.6180253094355,41.4122943472809,34.5823292817108,27.0874952689515,52.2072208132582,41.0816705323126,51.0346147574546,75.4249178812589,63.3553979556008,62.0710154598251,22.7178579999552,41.8666442991592,11.0148505706638,4.30211938490693,0.679971333707751,2.69851595818909,4.54843492213368,1.79210754838934,22.611551641212,20.9629296771011,14.8078022623635,16.606960001986,25.3518155598025,19.2489716121477,15.2883143823987,7.11066703153331,1.94841936910093,2.53359865475099,1.01104889002957,21.009833868307,11.3932668804756,40.9700303818916,57.2501578328248,66.3734742720468,59.268182794807,58.0282166127597,55.9722245965955,28.274983049177,3.95511948374998,14.749134405831,5.30766331169925,13.426648545635,9.05450225687614,10.1823803158397,13.0474232852686,86.9558967124295,78.7519617618591,2.55457055208591,8.50687383992034,4.19931911695385,5.46401976414178,71.7497162749101,66.3375874087008,42.0942079578096,62.5767552692195,62.1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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:59093 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P57722 | |||
|association_with_transcript=0bp_to_ENSMUST00000105411_5end | |||
|cluster_id=chr10:76424613..76424689,- | |||
|description=CAGE_peak_1_at_Pcbp3_5end | |||
|id=chr10:76424613..76424689,- | |||
|ontology_enrichment_celltype=CL:0000221!2.35e-16!44;CL:0000133!2.35e-16!44;CL:0002319!2.41e-16!43;CL:0000540!6.64e-14!33;CL:0000047!6.64e-14!33;CL:0000031!6.64e-14!33;CL:0000404!6.64e-14!33;CL:0000055!5.16e-12!50;CL:0000393!3.10e-10!39;CL:0000211!3.10e-10!39;CL:0000117!2.44e-08!23;CL:0000337!2.44e-08!23;CL:0000107!3.53e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.33e-16,44;CL:0000133,2.33e-16,44;CL:0002319,2.39e-16,43;CL:0000540,6.60e-14,33;CL:0000047,6.60e-14,33;CL:0000031,6.60e-14,33;CL:0000404,6.60e-14,33;CL:0000393,3.09e-10,39;CL:0000211,3.09e-10,39;CL:0000117,2.43e-08,23;CL:0000337,2.43e-08,23;CL:0000107,3.52e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.14e-33!102;UBERON:0000924!1.14e-33!102;UBERON:0006601!1.14e-33!102;UBERON:0000073!1.38e-32!75;UBERON:0001016!1.38e-32!75;UBERON:0001017!3.31e-32!73;UBERON:0005743!3.31e-32!73;UBERON:0002346!1.93e-31!71;UBERON:0003075!1.93e-31!71;UBERON:0007284!1.93e-31!71;UBERON:0000033!2.95e-23!63;UBERON:0001049!2.77e-21!52;UBERON:0005068!2.77e-21!52;UBERON:0006241!2.77e-21!52;UBERON:0007135!2.77e-21!52;UBERON:0000955!2.76e-20!50;UBERON:0006238!2.76e-20!50;UBERON:0002616!1.48e-19!49;UBERON:0003056!2.51e-19!49;UBERON:0003080!4.42e-15!40;UBERON:0002780!1.60e-14!39;UBERON:0001890!1.60e-14!39;UBERON:0006240!1.60e-14!39;UBERON:0002020!7.60e-14!34;UBERON:0007811!1.44e-12!86;UBERON:0000153!5.58e-12!94;UBERON:0002791!1.81e-11!29;UBERON:0003528!1.81e-11!29;UBERON:0001893!1.81e-11!29;UBERON:0000956!5.15e-09!21;UBERON:0001869!5.15e-09!21;UBERON:0000203!5.15e-09!21;UBERON:0002619!1.90e-08!17;UBERON:0000010!3.52e-07!11;UBERON:0002410!3.53e-07!9;UBERON:0003076!5.50e-07!12;UBERON:0003057!5.50e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.36e-32,75;UBERON:0001017,3.25e-32,73;UBERON:0004121,5.23e-30,95;UBERON:0000924,5.23e-30,95;UBERON:0006601,5.23e-30,95;UBERON:0002346,4.19e-28,64;UBERON:0003075,4.19e-28,64;UBERON:0007284,4.19e-28,64;UBERON:0010371,5.24e-23,73;UBERON:0000073,3.50e-22,54;UBERON:0001049,2.74e-21,52;UBERON:0005068,2.74e-21,52;UBERON:0006241,2.74e-21,52;UBERON:0007135,2.74e-21,52;UBERON:0003056,2.49e-19,49;UBERON:0010314,7.46e-19,92;UBERON:0000955,7.75e-19,47;UBERON:0006238,7.75e-19,47;UBERON:0002616,4.04e-18,46;UBERON:0003080,4.38e-15,40;UBERON:0002780,1.58e-14,39;UBERON:0001890,1.58e-14,39;UBERON:0006240,1.58e-14,39;UBERON:0002020,7.55e-14,34;UBERON:0003528,1.80e-11,29;UBERON:0002791,1.80e-11,29;UBERON:0001893,1.80e-11,29;UBERON:0000956,5.13e-09,21;UBERON:0001869,5.13e-09,21;UBERON:0000203,5.13e-09,21;UBERON:0002619,1.89e-08,17;UBERON:0000010,3.50e-07,11;UBERON:0002410,3.52e-07,9;UBERON:0003076,5.48e-07,12;UBERON:0003057,5.48e-07,12 | |||
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| |||
|short_description=p1@Pcbp3 | |||
}} |
Revision as of 17:31, 4 August 2015
Short description: | p1@Pcbp3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pcbp3_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000105411_5end |
EntrezGene: | 59093 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.33e-16 | 44 |
neurectodermal cell | 2.33e-16 | 44 |
neural cell | 2.39e-16 | 43 |
neuron | 6.60e-14 | 33 |
neuronal stem cell | 6.60e-14 | 33 |
neuroblast | 6.60e-14 | 33 |
electrically signaling cell | 6.60e-14 | 33 |
electrically responsive cell | 3.09e-10 | 39 |
electrically active cell | 3.09e-10 | 39 |
CNS neuron (sensu Vertebrata) | 2.43e-08 | 23 |
neuroblast (sensu Vertebrata) | 2.43e-08 | 23 |
autonomic neuron | 3.52e-07 | 9 |