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FFCP PHASE1:Mm9::chr5:89104567..89104588,-: Difference between revisions

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{{FFCP|EntrezGene=231413|HGNC=|UniProt=E9Q179,Q8C5Q4|association_with_transcript=16bp_to_NM_001098476,uc008yab.1_5end|description=CAGE_peak_5_at_Grsf1_5end|id=chr5:89104567..89104588,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!4.22e-16!63;UBERON:0004111!9.48e-15!122;UBERON:0000025!3.39e-14!114;UBERON:0004121!3.90e-13!102;UBERON:0000924!3.90e-13!102;UBERON:0006601!3.90e-13!102;UBERON:0003056!1.09e-12!49;UBERON:0002346!1.69e-12!71;UBERON:0003075!1.69e-12!71;UBERON:0007284!1.69e-12!71;UBERON:0001017!4.75e-11!73;UBERON:0005743!4.75e-11!73;UBERON:0000955!7.94e-11!50;UBERON:0006238!7.94e-11!50;UBERON:0000073!8.94e-11!75;UBERON:0001016!8.94e-11!75;UBERON:0002616!2.25e-10!49;UBERON:0001049!4.09e-09!52;UBERON:0005068!4.09e-09!52;UBERON:0006241!4.09e-09!52;UBERON:0007135!4.09e-09!52;UBERON:0003080!1.17e-08!40;UBERON:0002780!3.62e-08!39;UBERON:0001890!3.62e-08!39;UBERON:0006240!3.62e-08!39|ontology_enrichment_uberon_v019_2=UBERON:0010314,8.32e-20,92;UBERON:0002346,1.03e-14,64;UBERON:0003075,1.03e-14,64;UBERON:0007284,1.03e-14,64;UBERON:0004111,4.30e-14,122;UBERON:0004121,4.46e-14,95;UBERON:0000924,4.46e-14,95;UBERON:0006601,4.46e-14,95;UBERON:0000025,7.83e-14,114;UBERON:0003056,2.18e-13,49;UBERON:0010371,1.65e-12,73;UBERON:0001017,1.46e-11,73;UBERON:0001016,2.87e-11,75;UBERON:0000955,2.32e-10,47;UBERON:0006238,2.32e-10,47;UBERON:0000073,2.42e-10,54;UBERON:0002616,7.04e-10,46;UBERON:0001049,1.78e-09,52;UBERON:0005068,1.78e-09,52;UBERON:0006241,1.78e-09,52;UBERON:0007135,1.78e-09,52;UBERON:0003080,5.48e-09,40;UBERON:0002780,1.87e-08,39;UBERON:0001890,1.87e-08,39;UBERON:0006240,1.87e-08,39;UBERON:0000033,6.83e-07,13;UBERON:0000020,7.19e-07,12;UBERON:0001032,7.19e-07,12;UBERON:0004456,7.19e-07,12|phase1_expression=3.36312578920067,0.697950815278722,0.454999239389536,1.81478526784098,0.500895729946347,0.671517087647559,0.233612640595526,0.129123323441576,0.140788722151667,0.468129052643987,0,0,0,0.0874204024189974,0.333109761815663,0.202475267389826,0,0,0,0,2.04103896362567,0.496454756004426,0.783599367416806,0.639969691173627,0,0.57423196411502,0.86152399231815,0,0.570070258369122,0.252030129759931,0.221730510655305,0,0.61506478758457,0,0.288851619751275,0.498703936075477,0.612508068787107,1.67412652294763,0.7813353445238,0.523523743973798,0,0,0,0.125896817975577,0.608261587317087,1.28482726513177,0,0.218025156380447,0.439372365468944,0.388859798148567,0.699932108126813,0,0.503347818173209,1.45072428402269,1.00828139742739,0.514518872071894,0.85960031981627,0,0.606949382578793,0.528990979272033,1.26766280701236,0,0,0,0,0,0.299600110518405,1.15265491596466,2.38486108309499,2.29510095163874,2.52389953621658,0.856952953211411,0.662605622854841,2.57230678351403,3.35459148563827,0.919218786610021,3.30347642998166,4.59674417106676,5.83704826373725,0.659431438650969,1.18933936683133,3.12548022334056,3.07101298901519,1.68828783009504,3.51435969886663,1.47314292736834,2.13557521198654,1.3047961207771,0.454357159999104,1.96486056277642,1.15945795480671,0,4.0798280022465,4.85732872474035,0.649776417447669,5.82434953226536,3.7919993435573,0,0.259786004602869,0,2.25349471642689,0,0,0,0.432982082022428,0.760079596425296,1.01104889002957,3.9964357901671,0.258937883647172,0.593768556259299,0.867426633830679,1.21786191324856,0.461230994512117,1.3565037649736,1.88141931417128,0.753999547978053,2.22475470960936,2.60278842455841,0,1.45590164952668,1.32504911076236,2.42437626567611,0,3.22058876712702,5.02672096352292,0.255457055208591,0.599075622529601,0,0.635351135365324,5.99162557619291,7.32000964509802,1.7591609295801,3.99795936442236,2.81287003063364,6.02585329222724,4.2182728397617,1.42575109390443,1.7416975885413,0.505445516867349,10.5220927943237,3.90361328888111,5.0578462975364,2.34080768746954,2.56198190320716,5.8511389270142,7.17436833595159,4.77878795254617,6.20888089773638,1.29340795759705,1.70195472151037,0.527853372491847,0,0.556094498451196,1.0447564995665,0.205782136407943,2.7864797354589,0.702213187313235,0.51469581422943,0.852490498186778,2.89976081549703,1.64168241986767,2.16074473753218,3.07768156260773,3.34499193970586,4.62801338662135,6.74348439776183,5.90201483079162,10.0418194435766,6.7469538464527,11.1633875573785,12.8088719082452,14.3275987676826,12.2948064562988,11.4075455946316,3.36463917702604,2.98423375899925,0.660837565967596,1.58670339998127,1.06644125267617,2.09013004674395,1.03093969057675,0.201683524623343,0.444756087689741,0.951128130562796,0.474529061544512,1.4822905925161,1.50801125280162,1.39269530428806,1.16978452271472,0,0.864552199498777,0.995706366271836,0.758671603812327,0.685491075658373,0,2.24016460629846,2.52138233317913,2.94570443539338,2.90888070771584,6.9376769550413,3.61097074035162,5.55287237648102,5.92905254174298,0.333690211432188,0.393117990226406,0.449724224769707,0.405720242777006,0.482354319504834,0.763877555344259,1.43848068725405,10.0523840600522,1.64736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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:231413
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:E9Q179,uniprot:Q8C5Q4
|association_with_transcript=16bp_to_NM_001098476,uc008yab.1_5end
|cluster_id=chr5:89104567..89104588,-
|description=CAGE_peak_5_at_Grsf1_5end
|id=chr5:89104567..89104588,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!4.22e-16!63;UBERON:0004111!9.48e-15!122;UBERON:0000025!3.39e-14!114;UBERON:0004121!3.90e-13!102;UBERON:0000924!3.90e-13!102;UBERON:0006601!3.90e-13!102;UBERON:0003056!1.09e-12!49;UBERON:0002346!1.69e-12!71;UBERON:0003075!1.69e-12!71;UBERON:0007284!1.69e-12!71;UBERON:0001017!4.75e-11!73;UBERON:0005743!4.75e-11!73;UBERON:0000955!7.94e-11!50;UBERON:0006238!7.94e-11!50;UBERON:0000073!8.94e-11!75;UBERON:0001016!8.94e-11!75;UBERON:0002616!2.25e-10!49;UBERON:0001049!4.09e-09!52;UBERON:0005068!4.09e-09!52;UBERON:0006241!4.09e-09!52;UBERON:0007135!4.09e-09!52;UBERON:0003080!1.17e-08!40;UBERON:0002780!3.62e-08!39;UBERON:0001890!3.62e-08!39;UBERON:0006240!3.62e-08!39
|ontology_enrichment_uberon_v019_2=UBERON:0010314,8.32e-20,92;UBERON:0002346,1.03e-14,64;UBERON:0003075,1.03e-14,64;UBERON:0007284,1.03e-14,64;UBERON:0004111,4.30e-14,122;UBERON:0004121,4.46e-14,95;UBERON:0000924,4.46e-14,95;UBERON:0006601,4.46e-14,95;UBERON:0000025,7.83e-14,114;UBERON:0003056,2.18e-13,49;UBERON:0010371,1.65e-12,73;UBERON:0001017,1.46e-11,73;UBERON:0001016,2.87e-11,75;UBERON:0000955,2.32e-10,47;UBERON:0006238,2.32e-10,47;UBERON:0000073,2.42e-10,54;UBERON:0002616,7.04e-10,46;UBERON:0001049,1.78e-09,52;UBERON:0005068,1.78e-09,52;UBERON:0006241,1.78e-09,52;UBERON:0007135,1.78e-09,52;UBERON:0003080,5.48e-09,40;UBERON:0002780,1.87e-08,39;UBERON:0001890,1.87e-08,39;UBERON:0006240,1.87e-08,39;UBERON:0000033,6.83e-07,13;UBERON:0000020,7.19e-07,12;UBERON:0001032,7.19e-07,12;UBERON:0004456,7.19e-07,12
|phase1_expression=3.36312578920067,0.697950815278722,0.454999239389536,1.81478526784098,0.500895729946347,0.671517087647559,0.233612640595526,0.129123323441576,0.140788722151667,0.468129052643987,0,0,0,0.0874204024189974,0.333109761815663,0.202475267389826,0,0,0,0,2.04103896362567,0.496454756004426,0.783599367416806,0.639969691173627,0,0.57423196411502,0.86152399231815,0,0.570070258369122,0.252030129759931,0.221730510655305,0,0.61506478758457,0,0.288851619751275,0.498703936075477,0.612508068787107,1.67412652294763,0.7813353445238,0.523523743973798,0,0,0,0.125896817975577,0.608261587317087,1.28482726513177,0,0.218025156380447,0.439372365468944,0.388859798148567,0.699932108126813,0,0.503347818173209,1.45072428402269,1.00828139742739,0.514518872071894,0.85960031981627,0,0.606949382578793,0.528990979272033,1.26766280701236,0,0,0,0,0,0.299600110518405,1.15265491596466,2.38486108309499,2.29510095163874,2.52389953621658,0.856952953211411,0.662605622854841,2.57230678351403,3.35459148563827,0.919218786610021,3.30347642998166,4.59674417106676,5.83704826373725,0.659431438650969,1.18933936683133,3.12548022334056,3.07101298901519,1.68828783009504,3.51435969886663,1.47314292736834,2.13557521198654,1.3047961207771,0.454357159999104,1.96486056277642,1.15945795480671,0,4.0798280022465,4.85732872474035,0.649776417447669,5.82434953226536,3.7919993435573,0,0.259786004602869,0,2.25349471642689,0,0,0,0.432982082022428,0.760079596425296,1.01104889002957,3.9964357901671,0.258937883647172,0.593768556259299,0.867426633830679,1.21786191324856,0.461230994512117,1.3565037649736,1.88141931417128,0.753999547978053,2.22475470960936,2.60278842455841,0,1.45590164952668,1.32504911076236,2.42437626567611,0,3.22058876712702,5.02672096352292,0.255457055208591,0.599075622529601,0,0.635351135365324,5.99162557619291,7.32000964509802,1.7591609295801,3.99795936442236,2.81287003063364,6.02585329222724,4.2182728397617,1.42575109390443,1.7416975885413,0.505445516867349,10.5220927943237,3.90361328888111,5.0578462975364,2.34080768746954,2.56198190320716,5.8511389270142,7.17436833595159,4.77878795254617,6.20888089773638,1.29340795759705,1.70195472151037,0.527853372491847,0,0.556094498451196,1.0447564995665,0.205782136407943,2.7864797354589,0.702213187313235,0.51469581422943,0.852490498186778,2.89976081549703,1.64168241986767,2.16074473753218,3.07768156260773,3.34499193970586,4.62801338662135,6.74348439776183,5.90201483079162,10.0418194435766,6.7469538464527,11.1633875573785,12.8088719082452,14.3275987676826,12.2948064562988,11.4075455946316,3.36463917702604,2.98423375899925,0.660837565967596,1.58670339998127,1.06644125267617,2.09013004674395,1.03093969057675,0.201683524623343,0.444756087689741,0.951128130562796,0.474529061544512,1.4822905925161,1.50801125280162,1.39269530428806,1.16978452271472,0,0.864552199498777,0.995706366271836,0.758671603812327,0.685491075658373,0,2.24016460629846,2.52138233317913,2.94570443539338,2.90888070771584,6.9376769550413,3.61097074035162,5.55287237648102,5.92905254174298,0.333690211432188,0.393117990226406,0.449724224769707,0.405720242777006,0.482354319504834,0.763877555344259,1.43848068725405,10.0523840600522,1.64736847912849,4.31304619582064,2.97712758134803,1.87222603868736,3.03094653536534,3.22915344339442,13.5084185981743,0.554259570499814,1.32643988239339,2.44447464663039,1.18821560042632,0.938760993154008,1.17254380209271,2.14239276797412,3.70753930929818,1.89162172927429,1.7717175171902,0.797273843287435,0.491589944147214,0.863424909329478,1.44649058581512,0,0.54390568381871,0.983528546038072,1.10374698521893,7.38532713943843,7.2671245687166,0.491804836130026,2.7771801992481,2.2085575359138,3.12350995437311,2.58508077279359,1.19484398976276,2.00518806674155,2.26461224631066,4.04810701674894,4.09158201075837,3.55759000151871,4.4984984299053,1.13552068166615,0.534196811001766,0.977321756121456,0.989820737835213,0,1.21390318077491,0.604647113929502,0.565815239267694,0,0.922305443831782,1.29214146584111,0,1.42598951353889,1.26414703174326,0,1.03135543248187,1.70219802876894,1.98067203434441,2.19909762430683,1.07168517515796,2.83744373827638,1.78368817602071,1.81003922662333,1.8267896946876,0.704015124191131,0.42366414172764,0.882113592219848,0.98931751764888,1.45317984026315,0.542816324353403,0.716234064018819,0.328281799490123,1.1659233465194,5.00648315428376,0.341741761595705,0,0.555583582109135,0.565105371014073,0.410082683163076,0,1.01987057996313,2.09927178485487,1.38199973804424,0,0.632671987162271,0.203319467126849,0.756037385752609,1.04544148007234,1.31017538247707,1.34864346384821,1.48776220305605,0.785267825952089,0.388844919875379,1.86401793926078,2.81846469342095,1.19613236835183,0.992750942742586,1.16670713006429,1.29159823477731,0.844780627453891,2.58185925020659,1.8228613878153,2.20204623293993,3.14059357073808,4.89651010638371,0.316011120628178,0.608175645870493,1.02710957164827,0.25984164595559,0.537080087002444,0.39736270956253,0.120195449519969,0.295379054349154,0.504832249740738,0.533447646584999,0.201652370273681,0.0974578807397524,0.288635524920988,0.233753804363138,2.72076460338254,0.221985953374065,0.179427713218951,0.167884616364078,0.579568782096571,0.187682475451182,0.36630324853453,0.428736758158132,2.50786052017682,3.3885110557024,6.90487854760765,2.86447756719698,2.57779773515531,4.11049511862385,2.2661816921691,3.37511250115903,2.70192721934532,2.71885445390523,3.62432218226274,4.15149390336707,2.39414924040619,2.56100408631201,0.243106717068294,1.67690530102386,0.919217542250071,1.33348036680969,1.44224540067226,0.962757628775446,0.758091635291392,1.52087579934144,1.32038438970253,1.87283014939765,1.79270426733634,1.49332219284595,0.476293691283074,1.39061191133827,1.35036454324594,2.47251540481984,1.17759136107518,1.71434626192708,0.887379030796687,1.1921809497366,0,1.41164070622996,1.86152137361688,1.28049581010941,1.05227884575137,0.814824683075171,1.12228454331548,1.30498519936592,1.0835493061312,1.63692417267876,1.70430525304563,1.35034627686799,0.999242311751784,0.935726433781634,4.94203424311086,2.10417165275728,1.98532277207564,0.695603506861264
|short_description=p5@Grsf1
}}

Revision as of 17:24, 4 August 2015

Short description:p5@Grsf1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Grsf1_5end
Coexpression cluster:NA
Association with transcript: 16bp_to_NM_001098476, uc008yab.1_5end
EntrezGene:231413
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p5@Grsf1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.36
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.38
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.30
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.57
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.35
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.51
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F91.96
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.86
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.82
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.25
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F51.36
adrenal gland, neonate N00.CNhs11191.1311-23C11.88
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A82.22
aorta, adult.CNhs10498.46-23H12.60
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.46
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I25.03
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A45.99
corpus striatum, adult.CNhs10487.19-21D87.32
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D54.00
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F26.03
diencephalon, neonate N30.CNhs11201.1388-42B24.22
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.43
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.74
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G410.52
eyeball, embryo E12.CNhs11016.345-16C63.90
eyeball, embryo E14.CNhs10521.399-16E25.06
eyeball, embryo E15.CNhs10593.426-16C92.34
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C65.85
eyeball, neonate N01.CNhs11140.1532-43E77.17
eyeball, neonate N02.CNhs11205.1551-44G84.78
eyeball, neonate N16.CNhs11188.777-19A26.21
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I62.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E92.90
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I92.16
heart, embryo E14.CNhs10597.403-26D43.08
heart, embryo E15.CNhs11017.431-16C83.34
heart, embryo E16.CNhs11021.457-17C64.63
heart, embryo E17.CNhs11025.479-18E56.74
heart, embryo E18.CNhs11030.1283-20G35.90
heart, neonate N00.CNhs11213.639-21E310.04
heart, neonate N03.CNhs11221.1349-25I26.75
heart, neonate N10.CNhs11118.749-24G111.16
heart, neonate N16.CNhs11209.782-15G112.81
heart, neonate N20.CNhs11127.821-26I614.33
heart, neonate N25.CNhs11196.1351-25D312.29
heart, neonate N30.CNhs11202.1390-42D211.41
hippocampus, adult.CNhs10478.13-16E83.36
hippocampus, neonate N00.CNhs11228.627-43G12.98
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I22.24
kidney, embryo E18.CNhs11001.1288-20C72.52
kidney, neonate N00.CNhs11214.646-21G72.95
kidney, neonate N10.CNhs11206.758-6D52.91
kidney, neonate N20.CNhs11113.832-19I16.94
kidney, neonate N25.CNhs11122.1353-25F33.61
kidney, neonate N30.CNhs11203.1385-42H15.55
liver, adult pregnant day01.CNhs10466.508-5B25.93
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F410.05
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A33.03
liver, neonate N25.CNhs11198.1368-26H13.23
liver, neonate N30.CNhs11106.1382-42D113.51
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F82.44
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I62.14
lung, neonate N00.CNhs11224.640-42C63.71
lung, neonate N06.CNhs11212.683-20E51.89
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C27.39
medulla oblongata, neonate N30.CNhs11200.1396-42A37.27
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.78
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.09
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.56
olfactory brain, adult.CNhs10489.18-22I94.50
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C72.20
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B92.84
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C95.01
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.38
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A91.49
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I51.29
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B72.58
testis, neonate N07.CNhs11222.726-26I41.82
testis, neonate N10.CNhs11204.763-44D92.20
testis, neonate N20.CNhs11110.839-18H33.14
testis, neonate N30.CNhs11130.1391-42E24.90
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B42.72
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.90
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.58
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I84.15
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H22.56
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C24.94
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest8.32e-2092
neurectoderm1.03e-1464
neural plate1.03e-1464
presumptive neural plate1.03e-1464
anatomical conduit4.30e-14122
ectoderm-derived structure4.46e-1495
ectoderm4.46e-1495
presumptive ectoderm4.46e-1495
tube7.83e-14114
pre-chordal neural plate2.18e-1349
ecto-epithelium1.65e-1273
central nervous system1.46e-1173
nervous system2.87e-1175
brain2.32e-1047
future brain2.32e-1047
regional part of nervous system2.42e-1054
regional part of brain7.04e-1046
neural tube1.78e-0952
neural rod1.78e-0952
future spinal cord1.78e-0952
neural keel1.78e-0952
anterior neural tube5.48e-0940
regional part of forebrain1.87e-0839
forebrain1.87e-0839
future forebrain1.87e-0839
head6.83e-0713
sense organ7.19e-0712
sensory system7.19e-0712
entire sense organ system7.19e-0712
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