Personal tools

FFCP PHASE1:Mm9::chr1:128389260..128389301,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=210356|HGNC=|MCL_coexpression_id=32|UniProt=Q8C6S8|association_with_transcript=17bp_to_ENSMUST00000162877_5end|description=CAGE_peak_6_at_Nckap5_5end|id=chr1:128389260..128389301,-|ontology_enrichment_celltype=CL:0000117!8.70e-13!23;CL:0000337!8.70e-13!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.30e-15,23;CL:0000337,1.30e-15,23;CL:0000540,1.81e-09,33;CL:0000047,1.81e-09,33;CL:0000031,1.81e-09,33;CL:0000404,1.81e-09,33;CL:0000393,2.44e-07,39;CL:0000211,2.44e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.13e-11!71;UBERON:0003075!2.13e-11!71;UBERON:0007284!2.13e-11!71;UBERON:0002048!6.01e-11!14;UBERON:0000117!6.01e-11!14;UBERON:0000171!6.01e-11!14;UBERON:0000170!6.01e-11!14;UBERON:0005597!6.01e-11!14;UBERON:0000118!6.01e-11!14;UBERON:0000033!1.43e-10!63;UBERON:0000025!5.90e-10!114;UBERON:0003056!1.38e-09!49;UBERON:0001049!1.73e-09!52;UBERON:0005068!1.73e-09!52;UBERON:0006241!1.73e-09!52;UBERON:0007135!1.73e-09!52;UBERON:0004111!4.80e-09!122;UBERON:0000955!6.82e-09!50;UBERON:0006238!6.82e-09!50;UBERON:0002616!8.33e-09!49;UBERON:0002020!1.05e-08!34;UBERON:0004121!2.25e-08!102;UBERON:0000924!2.25e-08!102;UBERON:0006601!2.25e-08!102;UBERON:0005153!9.99e-08!17;UBERON:0005178!9.99e-08!17;UBERON:0005181!9.99e-08!17;UBERON:0002224!9.99e-08!17;UBERON:0000915!9.99e-08!17;UBERON:0008947!9.99e-08!17;UBERON:0003258!9.99e-08!17;UBERON:0003080!1.80e-07!40;UBERON:0001017!3.53e-07!73;UBERON:0005743!3.53e-07!73;UBERON:0002780!4.47e-07!39;UBERON:0001890!4.47e-07!39;UBERON:0006240!4.47e-07!39;UBERON:0002791!7.09e-07!29;UBERON:0003528!7.09e-07!29;UBERON:0001893!7.09e-07!29;UBERON:0000073!7.75e-07!75;UBERON:0001016!7.75e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0002048,5.77e-20,14;UBERON:0000117,5.77e-20,14;UBERON:0000171,5.77e-20,14;UBERON:0000170,5.77e-20,14;UBERON:0005597,5.77e-20,14;UBERON:0000118,5.77e-20,14;UBERON:0005153,9.94e-16,17;UBERON:0005178,9.94e-16,17;UBERON:0005181,9.94e-16,17;UBERON:0002224,9.94e-16,17;UBERON:0000915,9.94e-16,17;UBERON:0008947,9.94e-16,17;UBERON:0003258,9.94e-16,17;UBERON:0005157,8.87e-13,20;UBERON:0000025,1.79e-08,114;UBERON:0002020,8.54e-08,34;UBERON:0000310,2.03e-07,6;UBERON:0001443,2.03e-07,6;UBERON:0004111,2.52e-07,122|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,2.42779753031517,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,2.69592992002042,2.16009501330705,0.420649922702764,0.571301968807607,0.441737081903227,1.5923803897944,2.68367318851062,2.75765635983006,3.30347642998166,1.65993539510744,1.53606533256243,2.1101806036831,2.37867873366265,2.6045668527838,0.837548997004143,1.68828783009504,0.763991238884051,1.47314292736834,1.28134512719193,2.42319279572891,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0.890652834388949,0,0.608930956624282,0.461230994512117,0.301445281105245,0.470354828542819,1.38233250462643,0,0.144599356919912,0,0,0,0.484875253135222,0,0.585561594023094,0.209446706813455,0,0,0,0,1.19832511523858,0.457500602818626,2.26177833803156,0.173824320192276,0.255715457330331,0.83115217823824,0.324482526135515,0,0,0,0.210441855886474,0.130120442962704,0.459804208866946,0.360124259610698,1.05493372485001,0.680364991513279,0.768682321709099,1.40552586839593,2.06962696591213,0.215567992932842,0.756424320671277,0.527853372491847,0,0.556094498451196,0,0.411564272815887,0,0,0,0,0,0.234526059981096,0.36012412292203,0.946978942340841,0.787056926989615,0.154267112887378,0.465067889500816,0.268273401399619,0.350296027101508,0.16455984991348,0.492502392237286,1.29710095273369,2.92399974850665,3.07370161407471,1.61047702512446,0.841159794256509,2.98423375899925,0,0,0,0,0.38660238396628,0,0.444756087689741,0.380451252225118,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0,0.228497025219458,1.1270773567308,0.203651327845314,0.775809948670503,0.210407459670956,0.252946148497029,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0.763877555344259,0.863088412352432,0.162135226775035,0,0,0,0,0.252578877947112,0,0,12.3784637411625,0.189491411770485,2.77040459951444,2.8856664581782,4.45911471748154,5.86271901046355,4.28478553594825,4.29294025287157,11.1920952315396,8.858587585951,14.8292934851463,13.9283817508377,12.4333186943445,13.7416605652436,0,0,0,0,0.642202359951168,0.820481806145422,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0.900305470156551,0.129358683782755,0.428674070063185,0.354680467284547,0,0,0.304464949114599,0,0,0,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,1.11255181206306,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0,0,0.324016022465404,0.418176592028937,0.436725127492355,0.269728692769641,0.661227645802687,0.26175594198403,0,0,0,0,0,0,0,0,0.117357238645754,0,0.209718688851422,0,0,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0.100826185136841,0,0,0,0.906921534460845,0,0,0.335769232728157,0.386379188064381,0,0,0,0,1.12950368523413,0.460325236507177,0,0.343706364687375,0,2.2661816921691,0,0.45032120322422,0,0.51776031175182,0.207574695168353,1.19707462020309,0.853668028770671,0.486213434136588,0,0.735374033800057,1.33348036680969,0.618105171716683,0.962757628775446,0.505394423527595,1.77435509923168,1.13175804831646,0.468207537349412,0.640251524048693,0.804096565378586,0.476293691283074,1.27472758539341,0.77163688185482,1.23625770240992,1.32479028120958,1.02860775715625,0.70990322463735,0.953744759789284,1.30811774969096,1.31753132581463,0.761531471025089,0,1.8414879800649,1.08643291076689,1.12228454331548,0.949080144993393,1.0835493061312,1.22769312950907,0.929621047115796,1.15743966588685,0,0.701794825336225,1.07435527024149,0,0,0|short_description=p6@Nckap5}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:210356
|HGNC=
|MCL_coexpression_id=32
|TSSclassifier=NA
|UniProt=uniprot:Q8C6S8
|association_with_transcript=17bp_to_ENSMUST00000162877_5end
|cluster_id=chr1:128389260..128389301,-
|description=CAGE_peak_6_at_Nckap5_5end
|id=chr1:128389260..128389301,-
|ontology_enrichment_celltype=CL:0000117!8.70e-13!23;CL:0000337!8.70e-13!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.30e-15,23;CL:0000337,1.30e-15,23;CL:0000540,1.81e-09,33;CL:0000047,1.81e-09,33;CL:0000031,1.81e-09,33;CL:0000404,1.81e-09,33;CL:0000393,2.44e-07,39;CL:0000211,2.44e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!2.13e-11!71;UBERON:0003075!2.13e-11!71;UBERON:0007284!2.13e-11!71;UBERON:0002048!6.01e-11!14;UBERON:0000117!6.01e-11!14;UBERON:0000171!6.01e-11!14;UBERON:0000170!6.01e-11!14;UBERON:0005597!6.01e-11!14;UBERON:0000118!6.01e-11!14;UBERON:0000033!1.43e-10!63;UBERON:0000025!5.90e-10!114;UBERON:0003056!1.38e-09!49;UBERON:0001049!1.73e-09!52;UBERON:0005068!1.73e-09!52;UBERON:0006241!1.73e-09!52;UBERON:0007135!1.73e-09!52;UBERON:0004111!4.80e-09!122;UBERON:0000955!6.82e-09!50;UBERON:0006238!6.82e-09!50;UBERON:0002616!8.33e-09!49;UBERON:0002020!1.05e-08!34;UBERON:0004121!2.25e-08!102;UBERON:0000924!2.25e-08!102;UBERON:0006601!2.25e-08!102;UBERON:0005153!9.99e-08!17;UBERON:0005178!9.99e-08!17;UBERON:0005181!9.99e-08!17;UBERON:0002224!9.99e-08!17;UBERON:0000915!9.99e-08!17;UBERON:0008947!9.99e-08!17;UBERON:0003258!9.99e-08!17;UBERON:0003080!1.80e-07!40;UBERON:0001017!3.53e-07!73;UBERON:0005743!3.53e-07!73;UBERON:0002780!4.47e-07!39;UBERON:0001890!4.47e-07!39;UBERON:0006240!4.47e-07!39;UBERON:0002791!7.09e-07!29;UBERON:0003528!7.09e-07!29;UBERON:0001893!7.09e-07!29;UBERON:0000073!7.75e-07!75;UBERON:0001016!7.75e-07!75
|ontology_enrichment_uberon_v019_2=UBERON:0002048,5.77e-20,14;UBERON:0000117,5.77e-20,14;UBERON:0000171,5.77e-20,14;UBERON:0000170,5.77e-20,14;UBERON:0005597,5.77e-20,14;UBERON:0000118,5.77e-20,14;UBERON:0005153,9.94e-16,17;UBERON:0005178,9.94e-16,17;UBERON:0005181,9.94e-16,17;UBERON:0002224,9.94e-16,17;UBERON:0000915,9.94e-16,17;UBERON:0008947,9.94e-16,17;UBERON:0003258,9.94e-16,17;UBERON:0005157,8.87e-13,20;UBERON:0000025,1.79e-08,114;UBERON:0002020,8.54e-08,34;UBERON:0000310,2.03e-07,6;UBERON:0001443,2.03e-07,6;UBERON:0004111,2.52e-07,122
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,2.42779753031517,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,2.69592992002042,2.16009501330705,0.420649922702764,0.571301968807607,0.441737081903227,1.5923803897944,2.68367318851062,2.75765635983006,3.30347642998166,1.65993539510744,1.53606533256243,2.1101806036831,2.37867873366265,2.6045668527838,0.837548997004143,1.68828783009504,0.763991238884051,1.47314292736834,1.28134512719193,2.42319279572891,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0.890652834388949,0,0.608930956624282,0.461230994512117,0.301445281105245,0.470354828542819,1.38233250462643,0,0.144599356919912,0,0,0,0.484875253135222,0,0.585561594023094,0.209446706813455,0,0,0,0,1.19832511523858,0.457500602818626,2.26177833803156,0.173824320192276,0.255715457330331,0.83115217823824,0.324482526135515,0,0,0,0.210441855886474,0.130120442962704,0.459804208866946,0.360124259610698,1.05493372485001,0.680364991513279,0.768682321709099,1.40552586839593,2.06962696591213,0.215567992932842,0.756424320671277,0.527853372491847,0,0.556094498451196,0,0.411564272815887,0,0,0,0,0,0.234526059981096,0.36012412292203,0.946978942340841,0.787056926989615,0.154267112887378,0.465067889500816,0.268273401399619,0.350296027101508,0.16455984991348,0.492502392237286,1.29710095273369,2.92399974850665,3.07370161407471,1.61047702512446,0.841159794256509,2.98423375899925,0,0,0,0,0.38660238396628,0,0.444756087689741,0.380451252225118,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0,0.228497025219458,1.1270773567308,0.203651327845314,0.775809948670503,0.210407459670956,0.252946148497029,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0.763877555344259,0.863088412352432,0.162135226775035,0,0,0,0,0.252578877947112,0,0,12.3784637411625,0.189491411770485,2.77040459951444,2.8856664581782,4.45911471748154,5.86271901046355,4.28478553594825,4.29294025287157,11.1920952315396,8.858587585951,14.8292934851463,13.9283817508377,12.4333186943445,13.7416605652436,0,0,0,0,0.642202359951168,0.820481806145422,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0.900305470156551,0.129358683782755,0.428674070063185,0.354680467284547,0,0,0.304464949114599,0,0,0,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,1.11255181206306,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0,0,0.324016022465404,0.418176592028937,0.436725127492355,0.269728692769641,0.661227645802687,0.26175594198403,0,0,0,0,0,0,0,0,0.117357238645754,0,0.209718688851422,0,0,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0.100826185136841,0,0,0,0.906921534460845,0,0,0.335769232728157,0.386379188064381,0,0,0,0,1.12950368523413,0.460325236507177,0,0.343706364687375,0,2.2661816921691,0,0.45032120322422,0,0.51776031175182,0.207574695168353,1.19707462020309,0.853668028770671,0.486213434136588,0,0.735374033800057,1.33348036680969,0.618105171716683,0.962757628775446,0.505394423527595,1.77435509923168,1.13175804831646,0.468207537349412,0.640251524048693,0.804096565378586,0.476293691283074,1.27472758539341,0.77163688185482,1.23625770240992,1.32479028120958,1.02860775715625,0.70990322463735,0.953744759789284,1.30811774969096,1.31753132581463,0.761531471025089,0,1.8414879800649,1.08643291076689,1.12228454331548,0.949080144993393,1.0835493061312,1.22769312950907,0.929621047115796,1.15743966588685,0,0.701794825336225,1.07435527024149,0,0,0
|short_description=p6@Nckap5
}}

Revision as of 16:52, 4 August 2015

Short description:p6@Nckap5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Nckap5_5end
Coexpression cluster:MCL_coexpression_mm9:32
Association with transcript: 17bp_to_ENSMUST00000162877_5end
EntrezGene:210356
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Nckap5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.70
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.16
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.68
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.11
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.38
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.42
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I31.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F12.26
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G81.41
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G11.30
heart, neonate N20.CNhs11127.821-26I62.92
heart, neonate N25.CNhs11196.1351-25D33.07
heart, neonate N30.CNhs11202.1390-42D21.61
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G12.98
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B112.38
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F82.77
lung, embryo E15.CNhs11020.432-17C52.89
lung, embryo E16.CNhs10998.458-17B64.46
lung, embryo E17.CNhs10605.480-44A65.86
lung, embryo E18.CNhs10583.1287-20I64.28
lung, neonate N00.CNhs11224.640-42C64.29
lung, neonate N06.CNhs11212.683-20E511.19
lung, neonate N07.CNhs11111.715-19A38.86
lung, neonate N10.CNhs11219.750-23E614.83
lung, neonate N20.CNhs11109.822-18A413.93
lung, neonate N25.CNhs11119.1359-25C712.43
lung, neonate N30.CNhs11133.1394-42H213.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.30e-1523
neuroblast (sensu Vertebrata)1.30e-1523
neuron1.81e-0933
neuronal stem cell1.81e-0933
neuroblast1.81e-0933
electrically signaling cell1.81e-0933
electrically responsive cell2.44e-0739
electrically active cell2.44e-0739

Uber anatomy
Ontology termp-valuen
lung5.77e-2014
respiratory tube5.77e-2014
respiration organ5.77e-2014
pair of lungs5.77e-2014
lung primordium5.77e-2014
lung bud5.77e-2014
epithelial bud9.94e-1617
thoracic cavity element9.94e-1617
thoracic segment organ9.94e-1617
thoracic cavity9.94e-1617
thoracic segment of trunk9.94e-1617
respiratory primordium9.94e-1617
endoderm of foregut9.94e-1617
epithelial fold8.87e-1320
tube1.79e-08114
gray matter8.54e-0834
breast2.03e-076
chest2.03e-076
anatomical conduit2.52e-07122
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:128389260..128389301,-&oldid=3800561"