FFCP PHASE1:Mm9::chr2:174276179..174276209,+: Difference between revisions
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{{FFCP|EntrezGene=545486|HGNC=|MCL_coexpression_id=294|UniProt=A2AQ07|association_with_transcript=0bp_to_ENSMUST00000016399,NM_001080971,uc008ofe.1_5end|description=CAGE_peak_1_at_Tubb1_5end|id=chr2:174276179..174276209,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!9.33e-09!66;UBERON:0002048!1.09e-07!14;UBERON:0000117!1.09e-07!14;UBERON:0000171!1.09e-07!14;UBERON:0000170!1.09e-07!14;UBERON:0005597!1.09e-07!14;UBERON:0000118!1.09e-07!14;UBERON:0005153!8.63e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0009569,1.84e-09,66;UBERON:0002048,2.85e-09,14;UBERON:0000117,2.85e-09,14;UBERON:0000171,2.85e-09,14;UBERON:0000170,2.85e-09,14;UBERON:0005597,2.85e-09,14;UBERON:0000118,2.85e-09,14;UBERON:0005177,1.22e-07,79|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0,0,0,0,0,0,19.3203661853084,22.8797052150503,12.5921138063066,15.930839350591,14.9454732630255,3.81950686618227,0.510259740906419,0,0,0.159992422793407,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,3.76678467663217,0,3.14114246384279,0,11.6117732442936,4.85510353031154,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0.404632921719196,0,1.26766280701236,0,0,0,0,0,0,0,0.414758449233911,0.540023753326763,0.210324961351382,0.285650984403804,0,0,0.287536413054709,0,0,0.255374676170375,0.307213066512487,0.263772575460388,0.182975287204819,0,0.279182999001381,0,0,0.294628585473668,0,0.372798891650601,0,0,0.579728977403356,2.58127163094416,0,0,0,0,16.0106638950197,0,0,0,0,0,0,0,0,0,0,4.5673551887624,0.258937883647172,0.742210695324124,3.46970653532272,4.87144765299426,3.68984795609694,3.46662073271032,1.99900802130698,0.753999547978053,1.73036477414062,12.1463459812726,114.114761201534,3.72063754879041,28.04687284447,16.0008833534623,0,0,0.209446706813455,0,0,0,0.127070227073065,0.748953197024114,0.457500602818626,0,0.869121600961382,0.255715457330331,0,0.324482526135515,0.305518091550949,45.7817651845142,0,0,5.98554037628437,0.459804208866946,0.900310649026746,0.90422890701429,0.204109497453984,0,0.0937017245597288,0.258703370739016,6.03590380211958,3.59301552318857,1.23165786914764,0.657587197282725,1.11218899690239,0.348252166522167,0.411564272815887,1.59227413454795,0,0.257347907114715,0.284163499395593,8.07790512888457,11.0227248191115,4.32148947506436,3.31442629819294,1.37734962223183,1.69693824176116,1.16266972375204,1.07309360559848,1.16765342367169,0.658239399653922,3.2833492815819,4.37771571547621,4.5321996101853,4.83010253640311,6.84452735677896,0.210289948564127,0,0.330418782983798,0,4.90562976231038,2.55460339046482,1.80414445850931,1.00841762311671,0.667134131534611,0.190225626112559,0.474529061544512,0.658795818896044,0.754005626400808,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0.758671603812327,1.71372768914593,0,1.22190796707189,0.387904974335251,0.140271639780637,0,0.147610147979602,0.784993639206874,0.246794327843601,0.592905254174298,47.7177002348029,44.0292149053575,38.6762833301948,33.2690599077145,31.3530307678142,31.3189797691146,31.0711828446875,46.8570805379852,38.1640364331433,11.5014565221884,14.8856379067401,7.48890415474945,0.252578877947112,0.179397413521912,0,41.9389741678193,5.87423376488503,3.91115943460862,4.58311731593008,2.81628297946203,3.85264392116176,4.99891645860629,8.00047956216975,12.1379060961767,14.1737401375216,8.92946704481928,20.4829143394672,15.5416483679306,11.7165737451024,0,0,0.491764273019036,0.275936746304732,0.481651769963376,0.234423373184406,0,3.53459298086122,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0.488660878060728,0,0,2.42780636154981,2.41858845571801,0.754420319023592,0.295301892880773,0.307435147943927,0.516856586336442,1.09060118843252,1.06949213515416,0,0,1.03135543248187,0.340439605753788,4.68158844481407,3.23396709456886,2.7863814554107,1.06404140185364,1.07021290561242,0.987294123612726,2.13125464380219,3.05073220482823,2.54198485036584,0.661585194164886,0.16488625294148,0,0.361877549568935,0.358117032009409,0.656563598980245,0,0.370850604021019,49.894297192973,1.65109494370578,2.59272338317596,80.2449626839984,30.4828127817886,30.198718863261,0.339956859987711,0,0.414599921413271,0,4.74503990371703,1.21991680276109,1.18805874903981,0.418176592028937,0.218362563746178,0.809186078308924,1.81837602595739,0.26175594198403,0,1.24267862617385,0,1.79419855252775,1.82004339502807,0.777804753376191,0.774958940866387,0.337912250981556,0.58678619322877,0.13020438484395,0,0,0,0,3.04087822935246,1.54066435747241,0.129920822977795,0.537080087002444,0.79472541912506,0.360586348559907,0.295379054349154,0.504832249740738,0.228620419965,0.100826185136841,0.38983152295901,0.0962118416403295,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14166082342594,7.98049746802062,9.04888110496911,7.29320151204882,3.77303692730368,2.5738091183002,6.00066165064361,3.7086310303001,4.49286893428541,3.28506375292937,4.81610669791456,5.09291121742406,2.71560371662659,3.00918216302886,3.67587001315925,3.33405583898152,2.0859178670074,1.35036454324594,4.12085900803307,3.67997300335993,4.4573002810104,2.48466128623072,4.05341522910446,3.63366041580821,5.08190654242785,4.06150117880047,3.29270351170991,5.26139422875686,4.48153575691344,4.48913817326191,4.50813068871862,3.34915240076916,4.91077251803627,3.71848418846318,2.70069255373598,0.499621155875892,5.38042699424439,7.95022899978704,0.765153328275374,6.61774257358547,9.04284558919644|short_description=p1@Tubb1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:545486 | |||
|HGNC= | |||
|MCL_coexpression_id=294 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2AQ07 | |||
|association_with_transcript=0bp_to_ENSMUST00000016399,NM_001080971,uc008ofe.1_5end | |||
|cluster_id=chr2:174276179..174276209,+ | |||
|description=CAGE_peak_1_at_Tubb1_5end | |||
|id=chr2:174276179..174276209,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!9.33e-09!66;UBERON:0002048!1.09e-07!14;UBERON:0000117!1.09e-07!14;UBERON:0000171!1.09e-07!14;UBERON:0000170!1.09e-07!14;UBERON:0005597!1.09e-07!14;UBERON:0000118!1.09e-07!14;UBERON:0005153!8.63e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009569,1.84e-09,66;UBERON:0002048,2.85e-09,14;UBERON:0000117,2.85e-09,14;UBERON:0000171,2.85e-09,14;UBERON:0000170,2.85e-09,14;UBERON:0005597,2.85e-09,14;UBERON:0000118,2.85e-09,14;UBERON:0005177,1.22e-07,79 | |||
|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0,0,0,0,0,0,19.3203661853084,22.8797052150503,12.5921138063066,15.930839350591,14.9454732630255,3.81950686618227,0.510259740906419,0,0,0.159992422793407,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,3.76678467663217,0,3.14114246384279,0,11.6117732442936,4.85510353031154,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0.404632921719196,0,1.26766280701236,0,0,0,0,0,0,0,0.414758449233911,0.540023753326763,0.210324961351382,0.285650984403804,0,0,0.287536413054709,0,0,0.255374676170375,0.307213066512487,0.263772575460388,0.182975287204819,0,0.279182999001381,0,0,0.294628585473668,0,0.372798891650601,0,0,0.579728977403356,2.58127163094416,0,0,0,0,16.0106638950197,0,0,0,0,0,0,0,0,0,0,4.5673551887624,0.258937883647172,0.742210695324124,3.46970653532272,4.87144765299426,3.68984795609694,3.46662073271032,1.99900802130698,0.753999547978053,1.73036477414062,12.1463459812726,114.114761201534,3.72063754879041,28.04687284447,16.0008833534623,0,0,0.209446706813455,0,0,0,0.127070227073065,0.748953197024114,0.457500602818626,0,0.869121600961382,0.255715457330331,0,0.324482526135515,0.305518091550949,45.7817651845142,0,0,5.98554037628437,0.459804208866946,0.900310649026746,0.90422890701429,0.204109497453984,0,0.0937017245597288,0.258703370739016,6.03590380211958,3.59301552318857,1.23165786914764,0.657587197282725,1.11218899690239,0.348252166522167,0.411564272815887,1.59227413454795,0,0.257347907114715,0.284163499395593,8.07790512888457,11.0227248191115,4.32148947506436,3.31442629819294,1.37734962223183,1.69693824176116,1.16266972375204,1.07309360559848,1.16765342367169,0.658239399653922,3.2833492815819,4.37771571547621,4.5321996101853,4.83010253640311,6.84452735677896,0.210289948564127,0,0.330418782983798,0,4.90562976231038,2.55460339046482,1.80414445850931,1.00841762311671,0.667134131534611,0.190225626112559,0.474529061544512,0.658795818896044,0.754005626400808,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0.758671603812327,1.71372768914593,0,1.22190796707189,0.387904974335251,0.140271639780637,0,0.147610147979602,0.784993639206874,0.246794327843601,0.592905254174298,47.7177002348029,44.0292149053575,38.6762833301948,33.2690599077145,31.3530307678142,31.3189797691146,31.0711828446875,46.8570805379852,38.1640364331433,11.5014565221884,14.8856379067401,7.48890415474945,0.252578877947112,0.179397413521912,0,41.9389741678193,5.87423376488503,3.91115943460862,4.58311731593008,2.81628297946203,3.85264392116176,4.99891645860629,8.00047956216975,12.1379060961767,14.1737401375216,8.92946704481928,20.4829143394672,15.5416483679306,11.7165737451024,0,0,0.491764273019036,0.275936746304732,0.481651769963376,0.234423373184406,0,3.53459298086122,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0.488660878060728,0,0,2.42780636154981,2.41858845571801,0.754420319023592,0.295301892880773,0.307435147943927,0.516856586336442,1.09060118843252,1.06949213515416,0,0,1.03135543248187,0.340439605753788,4.68158844481407,3.23396709456886,2.7863814554107,1.06404140185364,1.07021290561242,0.987294123612726,2.13125464380219,3.05073220482823,2.54198485036584,0.661585194164886,0.16488625294148,0,0.361877549568935,0.358117032009409,0.656563598980245,0,0.370850604021019,49.894297192973,1.65109494370578,2.59272338317596,80.2449626839984,30.4828127817886,30.198718863261,0.339956859987711,0,0.414599921413271,0,4.74503990371703,1.21991680276109,1.18805874903981,0.418176592028937,0.218362563746178,0.809186078308924,1.81837602595739,0.26175594198403,0,1.24267862617385,0,1.79419855252775,1.82004339502807,0.777804753376191,0.774958940866387,0.337912250981556,0.58678619322877,0.13020438484395,0,0,0,0,3.04087822935246,1.54066435747241,0.129920822977795,0.537080087002444,0.79472541912506,0.360586348559907,0.295379054349154,0.504832249740738,0.228620419965,0.100826185136841,0.38983152295901,0.0962118416403295,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14166082342594,7.98049746802062,9.04888110496911,7.29320151204882,3.77303692730368,2.5738091183002,6.00066165064361,3.7086310303001,4.49286893428541,3.28506375292937,4.81610669791456,5.09291121742406,2.71560371662659,3.00918216302886,3.67587001315925,3.33405583898152,2.0859178670074,1.35036454324594,4.12085900803307,3.67997300335993,4.4573002810104,2.48466128623072,4.05341522910446,3.63366041580821,5.08190654242785,4.06150117880047,3.29270351170991,5.26139422875686,4.48153575691344,4.48913817326191,4.50813068871862,3.34915240076916,4.91077251803627,3.71848418846318,2.70069255373598,0.499621155875892,5.38042699424439,7.95022899978704,0.765153328275374,6.61774257358547,9.04284558919644 | |||
|short_description=p1@Tubb1 | |||
}} |
Revision as of 16:41, 4 August 2015
Short description: | p1@Tubb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tubb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:294 |
Association with transcript: | 0bp_to_ENSMUST00000016399, NM_001080971, uc008ofe.1_5end |
EntrezGene: | 545486 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subdivision of trunk | 1.84e-09 | 66 |
lung | 2.85e-09 | 14 |
respiratory tube | 2.85e-09 | 14 |
respiration organ | 2.85e-09 | 14 |
pair of lungs | 2.85e-09 | 14 |
lung primordium | 2.85e-09 | 14 |
lung bud | 2.85e-09 | 14 |
trunk region element | 1.22e-07 | 79 |