FFCP PHASE1:Mm9::chr9:111214178..111214262,+: Difference between revisions
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{{FFCP|EntrezGene=320429|HGNC=|MCL_coexpression_id=1|UniProt=Q8BV79|association_with_transcript=0bp_to_ENSMUST00000078626,NM_001164659,uc009rvt.2,uc012hbq.1_5end|description=CAGE_peak_3_at_Trank1_5end|id=chr9:111214178..111214262,+|ontology_enrichment_celltype=CL:0000117!3.65e-13!23;CL:0000337!3.65e-13!23;CL:0000540!2.21e-07!33;CL:0000047!2.21e-07!33;CL:0000031!2.21e-07!33;CL:0000404!2.21e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,9.72e-13,23;CL:0000337,9.72e-13,23;CL:0000540,3.55e-07,33;CL:0000047,3.55e-07,33;CL:0000031,3.55e-07,33;CL:0000404,3.55e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!4.20e-22!71;UBERON:0003075!4.20e-22!71;UBERON:0007284!4.20e-22!71;UBERON:0002020!3.99e-21!34;UBERON:0001049!1.60e-20!52;UBERON:0005068!1.60e-20!52;UBERON:0006241!1.60e-20!52;UBERON:0007135!1.60e-20!52;UBERON:0000955!2.50e-19!50;UBERON:0006238!2.50e-19!50;UBERON:0002616!1.60e-18!49;UBERON:0004121!3.86e-18!102;UBERON:0000924!3.86e-18!102;UBERON:0006601!3.86e-18!102;UBERON:0002791!1.51e-17!29;UBERON:0003528!1.51e-17!29;UBERON:0001893!1.51e-17!29;UBERON:0001017!1.99e-17!73;UBERON:0005743!1.99e-17!73;UBERON:0000033!4.71e-17!63;UBERON:0000073!4.91e-17!75;UBERON:0001016!4.91e-17!75;UBERON:0003080!4.13e-15!40;UBERON:0002780!2.30e-14!39;UBERON:0001890!2.30e-14!39;UBERON:0006240!2.30e-14!39;UBERON:0003056!2.35e-14!49;UBERON:0000956!1.98e-12!21;UBERON:0001869!1.98e-12!21;UBERON:0000203!1.98e-12!21;UBERON:0002619!1.74e-11!17;UBERON:0002021!2.08e-10!10;UBERON:0000411!2.08e-10!10;UBERON:0001950!2.08e-10!10;UBERON:0007811!5.13e-08!86;UBERON:0000991!1.30e-07!18;UBERON:0005564!1.30e-07!18;UBERON:0003135!1.31e-07!15;UBERON:0004176!2.16e-07!17;UBERON:0009196!2.16e-07!17;UBERON:0009117!2.16e-07!17;UBERON:0000473!5.25e-07!14;UBERON:0003101!7.72e-07!16;UBERON:0000079!7.72e-07!16;UBERON:0003133!9.00e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.69e-24,54;UBERON:0002020,3.88e-22,34;UBERON:0001049,7.11e-22,52;UBERON:0005068,7.11e-22,52;UBERON:0006241,7.11e-22,52;UBERON:0007135,7.11e-22,52;UBERON:0001017,7.34e-20,73;UBERON:0001016,6.10e-19,75;UBERON:0002346,1.55e-18,64;UBERON:0003075,1.55e-18,64;UBERON:0007284,1.55e-18,64;UBERON:0000955,1.03e-17,47;UBERON:0006238,1.03e-17,47;UBERON:0003528,1.43e-17,29;UBERON:0002791,1.43e-17,29;UBERON:0001893,1.43e-17,29;UBERON:0002616,9.33e-17,46;UBERON:0010314,7.35e-15,92;UBERON:0003080,1.19e-14,40;UBERON:0010371,1.20e-14,73;UBERON:0004121,2.51e-14,95;UBERON:0000924,2.51e-14,95;UBERON:0006601,2.51e-14,95;UBERON:0002619,5.53e-14,17;UBERON:0002780,9.38e-14,39;UBERON:0001890,9.38e-14,39;UBERON:0006240,9.38e-14,39;UBERON:0002021,2.33e-13,10;UBERON:0000411,2.33e-13,10;UBERON:0001950,2.33e-13,10;UBERON:0003056,3.50e-13,49;UBERON:0000956,3.89e-12,21;UBERON:0001869,3.89e-12,21;UBERON:0000203,3.89e-12,21;UBERON:0003135,1.19e-08,15;UBERON:0003076,3.82e-08,12;UBERON:0003057,3.82e-08,12;UBERON:0003101,6.76e-08,16;UBERON:0000079,6.76e-08,16;UBERON:0000473,7.21e-08,14;UBERON:0002240,8.90e-07,6;UBERON:0005174,8.90e-07,6;UBERON:0001137,8.90e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.6128571499706,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,2.63011399117477,4.7609188134483,5.07065122804943,0,0,0,0,0,0,0,0.414758449233911,0.405017814995072,0.210324961351382,8.2838785477103,11.9269012113871,1.71487118900936,1.43768206527355,1.83843757322004,13.2139057199266,13.0241084846891,11.8277030607307,2.90149833006426,4.66586982372289,0.52091337055676,12.5632349550621,15.1945904708554,15.5854212732346,14.4368006882097,13.0981946335175,7.64237727883732,0,0.151143120213571,0,0,0,0.539703191637817,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,14.8442139064825,1.38788261412909,2.43572382649713,5.07354093963329,4.22023393547343,7.52567725668511,9.92766071504436,0.494389935468748,0,0,0,0,0,0,12.5895742714965,12.3573557019938,0,0,0,0,16.6267609739353,23.33253074375,17.4659549436882,30.4192560336484,31.9644321662913,14.5451631191692,18.8199865158599,0.916554274652847,1.8661045591514,9.60346482047964,1.47309299120532,0,0,0,0,0.95251098811859,0.2562274405697,1.49922759295566,4.13925393182425,0,0,0,0,0,0,0,0.796137067273973,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.1788531075931,4.93942139420565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0.228497025219458,0,0,0,0.350679099451593,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,11.559642479121,11.2523219128515,0,0,0,0,0,0,0,0,0.809621403349789,0,0,25.7057053137446,0.425820255624806,0.178065603667255,0.81443479676788,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0.913394847343798,0.23467170806371,1.27099242518292,0,0,0.161464426695906,0,0,0,0,10.198391610578,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,6.20062232552609,2.0932316446157,1.32366792365678,1.94451188344048,1.54991788173277,3.54807863530634,4.45957506853865,8.33308063001281,16.1483390415595,9.90494895386625,4.60848010012585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680191150845634,0.221985953374065,0,0,0,0,0,0,0,36.1441179274923,28.0798394269378,32.6550442660456,38.8388192096734,34.2541259885321,32.4819375877571,32.4010800111267,37.3766598676103,33.9856806738153,38.3142630696347,0,0,0,0.243106717068294,0.209613162627982,0.551530525350042,1.11123363900808,0.824140228955577,0.962757628775446,2.27427490587418,1.01391719956096,1.13175804831646,1.49826411951812,1.47257850531199,1.14870937911227,1.42888107384922,1.50649623728312,0.77163688185482,0.412085900803307,0.441596760403192,1.02860775715625,0.532427418478012,1.66905332963125,0.872078499793971,1.12931256498397,1.09998990259179,0.365855945745545,1.31534855718921,1.7654534799962,1.12228454331548,1.54225523561426,1.97008964751127,0.818462086339379,1.70430525304563,1.35034627686799,2.74791635731741,1.63752125911786,1.07435527024149,0.765153328275374,0.220591419119515,0.231867835620421|short_description=p3@Trank1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:320429 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BV79 | |||
|association_with_transcript=0bp_to_ENSMUST00000078626,NM_001164659,uc009rvt.2,uc012hbq.1_5end | |||
|cluster_id=chr9:111214178..111214262,+ | |||
|description=CAGE_peak_3_at_Trank1_5end | |||
|id=chr9:111214178..111214262,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.65e-13!23;CL:0000337!3.65e-13!23;CL:0000540!2.21e-07!33;CL:0000047!2.21e-07!33;CL:0000031!2.21e-07!33;CL:0000404!2.21e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.72e-13,23;CL:0000337,9.72e-13,23;CL:0000540,3.55e-07,33;CL:0000047,3.55e-07,33;CL:0000031,3.55e-07,33;CL:0000404,3.55e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!4.20e-22!71;UBERON:0003075!4.20e-22!71;UBERON:0007284!4.20e-22!71;UBERON:0002020!3.99e-21!34;UBERON:0001049!1.60e-20!52;UBERON:0005068!1.60e-20!52;UBERON:0006241!1.60e-20!52;UBERON:0007135!1.60e-20!52;UBERON:0000955!2.50e-19!50;UBERON:0006238!2.50e-19!50;UBERON:0002616!1.60e-18!49;UBERON:0004121!3.86e-18!102;UBERON:0000924!3.86e-18!102;UBERON:0006601!3.86e-18!102;UBERON:0002791!1.51e-17!29;UBERON:0003528!1.51e-17!29;UBERON:0001893!1.51e-17!29;UBERON:0001017!1.99e-17!73;UBERON:0005743!1.99e-17!73;UBERON:0000033!4.71e-17!63;UBERON:0000073!4.91e-17!75;UBERON:0001016!4.91e-17!75;UBERON:0003080!4.13e-15!40;UBERON:0002780!2.30e-14!39;UBERON:0001890!2.30e-14!39;UBERON:0006240!2.30e-14!39;UBERON:0003056!2.35e-14!49;UBERON:0000956!1.98e-12!21;UBERON:0001869!1.98e-12!21;UBERON:0000203!1.98e-12!21;UBERON:0002619!1.74e-11!17;UBERON:0002021!2.08e-10!10;UBERON:0000411!2.08e-10!10;UBERON:0001950!2.08e-10!10;UBERON:0007811!5.13e-08!86;UBERON:0000991!1.30e-07!18;UBERON:0005564!1.30e-07!18;UBERON:0003135!1.31e-07!15;UBERON:0004176!2.16e-07!17;UBERON:0009196!2.16e-07!17;UBERON:0009117!2.16e-07!17;UBERON:0000473!5.25e-07!14;UBERON:0003101!7.72e-07!16;UBERON:0000079!7.72e-07!16;UBERON:0003133!9.00e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.69e-24,54;UBERON:0002020,3.88e-22,34;UBERON:0001049,7.11e-22,52;UBERON:0005068,7.11e-22,52;UBERON:0006241,7.11e-22,52;UBERON:0007135,7.11e-22,52;UBERON:0001017,7.34e-20,73;UBERON:0001016,6.10e-19,75;UBERON:0002346,1.55e-18,64;UBERON:0003075,1.55e-18,64;UBERON:0007284,1.55e-18,64;UBERON:0000955,1.03e-17,47;UBERON:0006238,1.03e-17,47;UBERON:0003528,1.43e-17,29;UBERON:0002791,1.43e-17,29;UBERON:0001893,1.43e-17,29;UBERON:0002616,9.33e-17,46;UBERON:0010314,7.35e-15,92;UBERON:0003080,1.19e-14,40;UBERON:0010371,1.20e-14,73;UBERON:0004121,2.51e-14,95;UBERON:0000924,2.51e-14,95;UBERON:0006601,2.51e-14,95;UBERON:0002619,5.53e-14,17;UBERON:0002780,9.38e-14,39;UBERON:0001890,9.38e-14,39;UBERON:0006240,9.38e-14,39;UBERON:0002021,2.33e-13,10;UBERON:0000411,2.33e-13,10;UBERON:0001950,2.33e-13,10;UBERON:0003056,3.50e-13,49;UBERON:0000956,3.89e-12,21;UBERON:0001869,3.89e-12,21;UBERON:0000203,3.89e-12,21;UBERON:0003135,1.19e-08,15;UBERON:0003076,3.82e-08,12;UBERON:0003057,3.82e-08,12;UBERON:0003101,6.76e-08,16;UBERON:0000079,6.76e-08,16;UBERON:0000473,7.21e-08,14;UBERON:0002240,8.90e-07,6;UBERON:0005174,8.90e-07,6;UBERON:0001137,8.90e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.6128571499706,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,2.63011399117477,4.7609188134483,5.07065122804943,0,0,0,0,0,0,0,0.414758449233911,0.405017814995072,0.210324961351382,8.2838785477103,11.9269012113871,1.71487118900936,1.43768206527355,1.83843757322004,13.2139057199266,13.0241084846891,11.8277030607307,2.90149833006426,4.66586982372289,0.52091337055676,12.5632349550621,15.1945904708554,15.5854212732346,14.4368006882097,13.0981946335175,7.64237727883732,0,0.151143120213571,0,0,0,0.539703191637817,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,14.8442139064825,1.38788261412909,2.43572382649713,5.07354093963329,4.22023393547343,7.52567725668511,9.92766071504436,0.494389935468748,0,0,0,0,0,0,12.5895742714965,12.3573557019938,0,0,0,0,16.6267609739353,23.33253074375,17.4659549436882,30.4192560336484,31.9644321662913,14.5451631191692,18.8199865158599,0.916554274652847,1.8661045591514,9.60346482047964,1.47309299120532,0,0,0,0,0.95251098811859,0.2562274405697,1.49922759295566,4.13925393182425,0,0,0,0,0,0,0,0.796137067273973,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.1788531075931,4.93942139420565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0.228497025219458,0,0,0,0.350679099451593,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,11.559642479121,11.2523219128515,0,0,0,0,0,0,0,0,0.809621403349789,0,0,25.7057053137446,0.425820255624806,0.178065603667255,0.81443479676788,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0.913394847343798,0.23467170806371,1.27099242518292,0,0,0.161464426695906,0,0,0,0,10.198391610578,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,6.20062232552609,2.0932316446157,1.32366792365678,1.94451188344048,1.54991788173277,3.54807863530634,4.45957506853865,8.33308063001281,16.1483390415595,9.90494895386625,4.60848010012585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680191150845634,0.221985953374065,0,0,0,0,0,0,0,36.1441179274923,28.0798394269378,32.6550442660456,38.8388192096734,34.2541259885321,32.4819375877571,32.4010800111267,37.3766598676103,33.9856806738153,38.3142630696347,0,0,0,0.243106717068294,0.209613162627982,0.551530525350042,1.11123363900808,0.824140228955577,0.962757628775446,2.27427490587418,1.01391719956096,1.13175804831646,1.49826411951812,1.47257850531199,1.14870937911227,1.42888107384922,1.50649623728312,0.77163688185482,0.412085900803307,0.441596760403192,1.02860775715625,0.532427418478012,1.66905332963125,0.872078499793971,1.12931256498397,1.09998990259179,0.365855945745545,1.31534855718921,1.7654534799962,1.12228454331548,1.54225523561426,1.97008964751127,0.818462086339379,1.70430525304563,1.35034627686799,2.74791635731741,1.63752125911786,1.07435527024149,0.765153328275374,0.220591419119515,0.231867835620421 | |||
|short_description=p3@Trank1 | |||
}} |
Revision as of 15:56, 4 August 2015
Short description: | p3@Trank1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Trank1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000078626, NM_001164659, uc009rvt.2, uc012hbq.1_5end |
EntrezGene: | 320429 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.72e-13 | 23 |
neuroblast (sensu Vertebrata) | 9.72e-13 | 23 |
neuron | 3.55e-07 | 33 |
neuronal stem cell | 3.55e-07 | 33 |
neuroblast | 3.55e-07 | 33 |
electrically signaling cell | 3.55e-07 | 33 |