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FFCP PHASE1:Mm9::chr17:3114957..3114982,+: Difference between revisions

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{{FFCP|EntrezGene=106583|HGNC=|UniProt=Q6DID3,Q8C9D3,F6WUK6,Q3TBS5|association_with_transcript=0bp_to_ENSMUST00000076734,ENSMUST00000082356,ENSMUST00000169780,ENSMUST00000170698,NM_134123,uc008aei.2,uc008aej.2_5end|description=CAGE_peak_1_at_Scaf8_5end|id=chr17:3114957..3114982,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!3.36e-14!94;UBERON:0007811!5.57e-12!86;UBERON:0000033!1.31e-09!63;UBERON:0003056!1.82e-09!49;UBERON:0001017!3.84e-08!73;UBERON:0005743!3.84e-08!73;UBERON:0000468!5.61e-08!333;UBERON:0002346!8.72e-08!71;UBERON:0003075!8.72e-08!71;UBERON:0007284!8.72e-08!71;UBERON:0004121!1.76e-07!102;UBERON:0000924!1.76e-07!102;UBERON:0006601!1.76e-07!102;UBERON:0000955!2.82e-07!50;UBERON:0006238!2.82e-07!50;UBERON:0000073!3.17e-07!75;UBERON:0001016!3.17e-07!75;UBERON:0001049!7.08e-07!52;UBERON:0005068!7.08e-07!52;UBERON:0006241!7.08e-07!52;UBERON:0007135!7.08e-07!52;UBERON:0002616!8.52e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.85e-10,64;UBERON:0003075,2.85e-10,64;UBERON:0007284,2.85e-10,64;UBERON:0010371,5.09e-10,73;UBERON:0003056,1.82e-09,49;UBERON:0004121,2.24e-09,95;UBERON:0000924,2.24e-09,95;UBERON:0006601,2.24e-09,95;UBERON:0001017,3.84e-08,73;UBERON:0001016,3.17e-07,75;UBERON:0000955,4.80e-07,47;UBERON:0006238,4.80e-07,47;UBERON:0001049,7.08e-07,52;UBERON:0005068,7.08e-07,52;UBERON:0006241,7.08e-07,52;UBERON:0007135,7.08e-07,52|phase1_expression=26.7448574665006,15.7038933437712,15.4699741392442,39.6228116811947,29.5528480668345,22.831580980017,19.1562365288331,22.854828249159,22.2446180999633,21.7680009479454,22.4295538375412,22.2564323596989,22.2560948910567,24.6525534821573,25.649451659806,26.1193094932875,28.682037003254,39.9059639178171,40.3116434800872,31.4048342330542,24.7475974339613,6.45391182805754,4.4403964153619,11.9994317095055,13.3057383018959,8.03924749761028,12.9228598847722,15.9448712187558,14.251756459228,16.1299283046356,12.6386391073524,10.7955214488137,12.916360539276,0,20.2196133825892,17.9533416987172,18.783580776138,9.62622750694888,10.1573594788094,13.088093599345,11.1763982725893,11.6117732442936,12.1377588257788,14.4781340671914,15.7134243390248,13.2153661556411,8.60630478782843,8.28495594245697,7.90870257844099,9.91592485278845,10.2190087786515,7.18762821824858,36.4088255145288,44.247090662692,31.2567233202492,13.3774906738692,10.3152038377952,11.8604581223812,32.168317276676,33.8554226734101,29.7900759647904,7.79342423759004,5.33576877666684,4.94944844504769,3.9554654502679,3.5524005747305,5.39280198933128,13.0634223809329,41.7869137603165,42.6618765128142,38.2791429659515,18.2816630018434,19.6573001446936,29.6427734100189,34.3126786245286,29.4150011715207,28.6301290598411,27.197403012145,25.4986845205364,36.5325017012637,30.1909223887952,31.7757156039624,26.8015679041326,20.2594539611405,23.0725354142983,28.5789727909458,29.4709379254143,29.2647129945722,10.9045718399785,12.69602209794,32.7546872232896,12.9063581547208,28.5587960157255,8.63525106620507,13.6453047664011,18.3691023709908,16.431997155415,13.2935651610885,9.09251016110041,7.0667914902068,22.2532603247155,30.7983545794363,38.2207859559969,49.7746692207332,6.27824018932521,7.34743609877786,8.59391556525132,18.8403401536449,30.2957323867191,22.1178787206589,15.26670875542,14.6143429589828,12.4532368518272,14.9215414147096,25.2815720341765,10.8073268543521,21.7531571606249,20.2439099687876,32.7305904221453,20.2208562434261,18.1090045137523,16.4857586065976,22.3670113461747,54.4572282441478,43.5649150171987,12.517395705221,12.9400334466394,3.59941638596045,10.0385479387721,32.6543593902514,32.4825428001225,34.9319098873763,32.1574992355711,29.9187085076487,37.4018480207208,30.9880812459417,25.0524835071778,25.2546150338489,16.9324248150562,29.8827435358793,32.5301107406759,28.0480567408837,35.8323638312645,25.0169997607287,41.3661914840073,41.5088453722913,39.5421277642056,44.2382763963717,44.1914385512327,47.6547322022905,36.5978338261014,25.6459006940263,26.970583174883,33.432207986128,21.812906459242,17.5150154800274,6.31991868581911,7.46308930632674,8.24074148247219,26.5120988845442,23.4526059981096,20.3470129450947,32.4340287751738,25.9728785906573,18.5120535464854,23.2533944750408,24.1446061259657,22.068649707395,19.7471819896177,22.1626076506779,23.6720923873899,24.5615978874558,18.2226595691572,19.5941371390143,35.9595812044658,29.6365283652339,9.25172592354634,17.4537373997939,26.0211665652985,31.3519507011592,35.5674193248978,25.6138076271645,23.3496946037114,19.2127882373685,15.1849299694244,16.3051965176771,18.3474702424197,19.2987777879916,15.7920910566487,18.8752075817387,14.4812493416045,14.3381716743144,22.7601481143698,21.1359748327998,30.4310886317317,18.3286195060783,20.1710586654331,20.7602026875343,25.4210879239514,16.8275568696746,16.7988638790271,14.1906738510071,8.59712618552732,28.0299777603038,22.6042844380183,23.1607975756399,27.1832562660594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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:106583
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q6DID3,uniprot:Q8C9D3,uniprot:F6WUK6,uniprot:Q3TBS5
|association_with_transcript=0bp_to_ENSMUST00000076734,ENSMUST00000082356,ENSMUST00000169780,ENSMUST00000170698,NM_134123,uc008aei.2,uc008aej.2_5end
|cluster_id=chr17:3114957..3114982,+
|description=CAGE_peak_1_at_Scaf8_5end
|id=chr17:3114957..3114982,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!3.36e-14!94;UBERON:0007811!5.57e-12!86;UBERON:0000033!1.31e-09!63;UBERON:0003056!1.82e-09!49;UBERON:0001017!3.84e-08!73;UBERON:0005743!3.84e-08!73;UBERON:0000468!5.61e-08!333;UBERON:0002346!8.72e-08!71;UBERON:0003075!8.72e-08!71;UBERON:0007284!8.72e-08!71;UBERON:0004121!1.76e-07!102;UBERON:0000924!1.76e-07!102;UBERON:0006601!1.76e-07!102;UBERON:0000955!2.82e-07!50;UBERON:0006238!2.82e-07!50;UBERON:0000073!3.17e-07!75;UBERON:0001016!3.17e-07!75;UBERON:0001049!7.08e-07!52;UBERON:0005068!7.08e-07!52;UBERON:0006241!7.08e-07!52;UBERON:0007135!7.08e-07!52;UBERON:0002616!8.52e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.85e-10,64;UBERON:0003075,2.85e-10,64;UBERON:0007284,2.85e-10,64;UBERON:0010371,5.09e-10,73;UBERON:0003056,1.82e-09,49;UBERON:0004121,2.24e-09,95;UBERON:0000924,2.24e-09,95;UBERON:0006601,2.24e-09,95;UBERON:0001017,3.84e-08,73;UBERON:0001016,3.17e-07,75;UBERON:0000955,4.80e-07,47;UBERON:0006238,4.80e-07,47;UBERON:0001049,7.08e-07,52;UBERON:0005068,7.08e-07,52;UBERON:0006241,7.08e-07,52;UBERON:0007135,7.08e-07,52
|phase1_expression=26.7448574665006,15.7038933437712,15.4699741392442,39.6228116811947,29.5528480668345,22.831580980017,19.1562365288331,22.854828249159,22.2446180999633,21.7680009479454,22.4295538375412,22.2564323596989,22.2560948910567,24.6525534821573,25.649451659806,26.1193094932875,28.682037003254,39.9059639178171,40.3116434800872,31.4048342330542,24.7475974339613,6.45391182805754,4.4403964153619,11.9994317095055,13.3057383018959,8.03924749761028,12.9228598847722,15.9448712187558,14.251756459228,16.1299283046356,12.6386391073524,10.7955214488137,12.916360539276,0,20.2196133825892,17.9533416987172,18.783580776138,9.62622750694888,10.1573594788094,13.088093599345,11.1763982725893,11.6117732442936,12.1377588257788,14.4781340671914,15.7134243390248,13.2153661556411,8.60630478782843,8.28495594245697,7.90870257844099,9.91592485278845,10.2190087786515,7.18762821824858,36.4088255145288,44.247090662692,31.2567233202492,13.3774906738692,10.3152038377952,11.8604581223812,32.168317276676,33.8554226734101,29.7900759647904,7.79342423759004,5.33576877666684,4.94944844504769,3.9554654502679,3.5524005747305,5.39280198933128,13.0634223809329,41.7869137603165,42.6618765128142,38.2791429659515,18.2816630018434,19.6573001446936,29.6427734100189,34.3126786245286,29.4150011715207,28.6301290598411,27.197403012145,25.4986845205364,36.5325017012637,30.1909223887952,31.7757156039624,26.8015679041326,20.2594539611405,23.0725354142983,28.5789727909458,29.4709379254143,29.2647129945722,10.9045718399785,12.69602209794,32.7546872232896,12.9063581547208,28.5587960157255,8.63525106620507,13.6453047664011,18.3691023709908,16.431997155415,13.2935651610885,9.09251016110041,7.0667914902068,22.2532603247155,30.7983545794363,38.2207859559969,49.7746692207332,6.27824018932521,7.34743609877786,8.59391556525132,18.8403401536449,30.2957323867191,22.1178787206589,15.26670875542,14.6143429589828,12.4532368518272,14.9215414147096,25.2815720341765,10.8073268543521,21.7531571606249,20.2439099687876,32.7305904221453,20.2208562434261,18.1090045137523,16.4857586065976,22.3670113461747,54.4572282441478,43.5649150171987,12.517395705221,12.9400334466394,3.59941638596045,10.0385479387721,32.6543593902514,32.4825428001225,34.9319098873763,32.1574992355711,29.9187085076487,37.4018480207208,30.9880812459417,25.0524835071778,25.2546150338489,16.9324248150562,29.8827435358793,32.5301107406759,28.0480567408837,35.8323638312645,25.0169997607287,41.3661914840073,41.5088453722913,39.5421277642056,44.2382763963717,44.1914385512327,47.6547322022905,36.5978338261014,25.6459006940263,26.970583174883,33.432207986128,21.812906459242,17.5150154800274,6.31991868581911,7.46308930632674,8.24074148247219,26.5120988845442,23.4526059981096,20.3470129450947,32.4340287751738,25.9728785906573,18.5120535464854,23.2533944750408,24.1446061259657,22.068649707395,19.7471819896177,22.1626076506779,23.6720923873899,24.5615978874558,18.2226595691572,19.5941371390143,35.9595812044658,29.6365283652339,9.25172592354634,17.4537373997939,26.0211665652985,31.3519507011592,35.5674193248978,25.6138076271645,23.3496946037114,19.2127882373685,15.1849299694244,16.3051965176771,18.3474702424197,19.2987777879916,15.7920910566487,18.8752075817387,14.4812493416045,14.3381716743144,22.7601481143698,21.1359748327998,30.4310886317317,18.3286195060783,20.1710586654331,20.7602026875343,25.4210879239514,16.8275568696746,16.7988638790271,14.1906738510071,8.59712618552732,28.0299777603038,22.6042844380183,23.1607975756399,27.1832562660594,21.2235900582127,15.2775511068852,17.2617682470486,23.3474726556051,9.88421087477093,31.629005436018,11.5363693777236,12.793544597697,10.6083128737787,13.4548060141434,20.7450714186248,21.6161232494927,26.9077804714088,30.4744505946588,20.8786455503481,22.2955735874077,35.0088078053395,29.0413241880937,24.7819732779405,28.847231371433,29.0118743439895,23.2803962239931,22.4492741160561,16.0597033135283,22.7099021972973,15.0791283939272,3.80733978673097,11.8023425524569,19.8674457339407,30.3440615076927,28.1308047821288,11.9672510124973,19.9452032491455,27.4492150892143,27.3307121007647,32.098086262187,23.4189421993501,32.0830090678648,42.178403087536,31.1704240289669,25.1340037803728,39.1334900167058,48.8408400961147,27.3944364451958,14.9575107080494,24.2701569436828,24.7455184458803,29.2039304347918,17.9657670754686,14.2092071773433,20.5579536933929,20.3758306087733,25.517117279346,24.2922595578128,25.0838273339479,19.6073558111597,23.7027568451862,20.0295356292498,18.5643977846736,41.8740715077159,28.9898361390409,20.0505959863269,19.2903331528433,28.9064580836906,27.6471667283209,20.7331765958672,19.4857567433344,12.2029288193129,12.921756322693,19.4064990288366,41.7162219941944,33.9075296061402,26.5376869683886,19.218947384505,26.5908257586999,19.5292160542,37.6413363081335,24.4345359540929,16.717336305021,20.3713980106683,23.169320211577,26.6553744055999,23.7929300134784,14.7881234094654,14.4149995893368,13.5435974328335,9.54670618015114,31.0009273709513,28.8713643320125,17.7128758947754,20.072476417389,15.5037420259786,16.9929076444874,23.3082745145447,12.8260411572175,20.7383957266869,14.9121435140862,14.0923234671048,29.0062099325319,18.696809421652,26.8342639914786,22.086329814692,21.4574279373288,28.165737274981,19.5306577265925,27.8925856172391,17.3940566994724,21.6022504693399,30.6530787009333,12.3662381327,14.0714011315813,16.49994451818,22.5573636541027,32.3850608293462,29.6882760314323,29.0948368533917,32.9150626830961,32.2354792150649,33.8775982059784,39.1780680573805,33.000661682633,44.8807304377225,24.9403421976732,19.7567498502918,20.6341870201794,11.4161539127573,23.375940877895,12.387043379778,25.6412273974171,19.7218908752741,19.0597399533438,33.3203587144069,25.3178880078947,33.8008352929244,21.4816477929609,23.2928056722018,41.5466643564335,30.3760125104313,26.1186297870048,32.6262534468627,34.6899408873719,29.7869687566587,34.7151639858897,33.6345203335644,23.5813515556245,20.5420899375423,19.6712554041515,30.8922951644245,40.7949413333011,34.3383554263242,27.7966932940177,30.1640366869385,33.5754887667216,36.0519803759047,35.9181104991317,33.5997493390338,29.5302088595506,30.7093463753867,33.1803859197573,27.1976694530182,36.2109343530617,30.1724942099166,25.9114676992633,31.4735770730464,26.7437406603484,28.5151422658452,26.8228307016615,29.4514036325164,23.6762740294059,33.2720078922361,27.4959713112292,31.5569148210303,26.9902281709044,25.3723246765207,27.5787577311019,28.5501784252089,26.9795424172982,26.6682033627766,32.6604002153413,30.9887097951526,21.838550492832,25.2735940826259
|short_description=p1@Scaf8
}}

Revision as of 14:29, 4 August 2015

Short description:p1@Scaf8
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Scaf8_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000076734, ENSMUST00000082356, ENSMUST00000169780, ENSMUST00000170698, NM_134123, uc008aei.2, uc008aej.2_5end
EntrezGene:106583
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Scaf8

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G726.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I515.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I615.47
CD326+ enterocyte, pool1.CNhs13542.11848-124I339.62
CD326+ enterocyte, pool2.CNhs13197.11849-124I429.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I722.83
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I819.16
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E922.85
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E722.24
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F221.77
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E622.43
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F122.26
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E422.26
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E824.65
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A125.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A326.12
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A528.68
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A239.91
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A440.31
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A631.40
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A324.75
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H26.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.44
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D112.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D213.31
GP2+ M cell, pool1.CNhs13228.11845-124H98.04
GP2+ M cell, pool2.CNhs13231.11846-124I112.92
GP2+ M cell, pool3.CNhs13240.11847-124I215.94
Ileum epithelium, pool1.CNhs13199.10252-104B914.25
Ileum epithelium, pool2.CNhs13232.10253-104C116.13
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C812.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I310.80
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G612.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F520.22
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F617.95
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F718.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G89.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H110.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H313.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G911.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H211.61
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H412.14
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D814.48
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D915.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B313.22
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B78.61
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C28.28
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B87.91
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C39.92
Mouse Astrocytes, donor2.CNhs12078.11552-120C410.22
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A236.41
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I944.25
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A131.26
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C113.38
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.32
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C511.86
Mouse Granule cells, donor1.CNhs12131.11713-123C332.17
Mouse Granule cells, donor2.CNhs12357.11731-123E333.86
Mouse Granule cells, donor3.CNhs12108.11636-122C729.79
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.79
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C85.39
Mouse Microglia, donor2.CNhs12634.11736-123E813.06
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D541.79
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F542.66
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D938.28
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F118.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D519.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D229.64
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F234.31
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D629.42
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D328.63
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F327.20
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D725.50
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D436.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F430.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D831.78
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E426.80
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E520.26
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I623.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D628.58
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F629.47
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E129.26
Mouse Schwann, donor1.CNhs12507.11728-123D910.90
Mouse Schwann, donor2.CNhs12573.11746-123F912.70
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G332.75
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F712.91
Mouse hepatocyte, donor1.CNhs13078.11714-123C428.56
Mouse hepatocyte, donor3.CNhs12615.11637-122C88.64
Mouse hepatocyte, donor6.CNhs13090.11822-124F413.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F618.37
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A716.43
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I713.29
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E39.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I87.07
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G622.25
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H130.80
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I838.22
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B649.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G27.35
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G38.59
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B618.84
accessory axillary lymph node, adult.CNhs10475.1063-29H930.30
adrenal gland, adult.CNhs10508.49-24D722.12
adrenal gland, embryo E14.CNhs11038.406-44C515.27
adrenal gland, embryo E16.CNhs11004.1254-43D614.61
adrenal gland, embryo E17.CNhs11043.1263-45I112.45
adrenal gland, embryo E18.CNhs11026.1262-18F514.92
adrenal gland, neonate N00.CNhs11191.1311-23C125.28
adrenal gland, neonate N25.CNhs11223.1377-27I310.81
amnion, adult pregnant day17.5.CNhs10488.583-22A821.75
aorta, adult.CNhs10498.46-23H120.24
bone (os femoris), adult.CNhs10483.56-12G232.73
bone (os femoris), neonate N02.CNhs11227.1985-43F520.22
bone (os femoris), neonate N16.CNhs11225.1525-43A618.11
bone (os femoris), neonate N20.CNhs11195.1350-25C316.49
cecum, adult.CNhs10467.37-13H422.37
cerebellum, adult.CNhs10494.15-8B254.46
cerebellum, neonate N30.CNhs11135.1395-42I243.56
colon, adult.CNhs10468.36-18H712.52
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C712.94
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D410.04
corpora quadrigemina, adult.CNhs10501.16-22A432.65
corpus striatum, adult.CNhs10487.19-21D832.48
corpus striatum, neonate N00.CNhs11226.630-43F134.93
cortex, adult.CNhs10473.12-14D532.16
cortex, neonate N30.CNhs11107.1392-42F229.92
diencephalon, adult.CNhs10482.20-12F237.40
diencephalon, neonate N30.CNhs11201.1388-42B230.99
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B125.05
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A225.25
epididymis, adult.CNhs10490.58-23B216.93
eyeball, adult.CNhs10484.31-12G429.88
eyeball, embryo E12.CNhs11016.345-16C632.53
eyeball, embryo E14.CNhs10521.399-16E228.05
eyeball, embryo E15.CNhs10593.426-16C935.83
eyeball, embryo E17.CNhs11023.1261-18D425.02
eyeball, neonate N00.CNhs11207.633-15C641.37
eyeball, neonate N01.CNhs11140.1532-43E741.51
eyeball, neonate N02.CNhs11205.1551-44G839.54
eyeball, neonate N16.CNhs11188.777-19A244.24
forelimb, embryo E11.CNhs10596.335-25E244.19
forelimb, embryo E12.CNhs10600.359-14H247.65
forelimb, embryo E13.CNhs10589.384-1E236.60
forelimb, embryo E14.CNhs10577.413-26A825.65
forelimb, embryo E15.CNhs11007.437-20E726.97
forelimb, embryo E17.CNhs10598.1517-43C433.43
forelimb, embryo E18.CNhs11008.1520-43B521.81
gonad, embryo E13.CNhs11044.1564-45I617.52
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C86.32
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D27.46
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D58.24
heart, embryo E11.CNhs10586.331-24E926.51
heart, embryo E12.CNhs11015.353-12F523.45
heart, embryo E13.CNhs11013.376-3I920.35
heart, embryo E14.CNhs10597.403-26D432.43
heart, embryo E15.CNhs11017.431-16C825.97
heart, embryo E16.CNhs11021.457-17C618.51
heart, embryo E17.CNhs11025.479-18E523.25
heart, embryo E18.CNhs11030.1283-20G324.14
heart, neonate N00.CNhs11213.639-21E322.07
heart, neonate N03.CNhs11221.1349-25I219.75
heart, neonate N10.CNhs11118.749-24G122.16
heart, neonate N16.CNhs11209.782-15G123.67
heart, neonate N20.CNhs11127.821-26I624.56
heart, neonate N25.CNhs11196.1351-25D318.22
heart, neonate N30.CNhs11202.1390-42D219.59
hippocampus, adult.CNhs10478.13-16E835.96
hippocampus, neonate N00.CNhs11228.627-43G129.64
intestinal mucosa, adult.CNhs10506.860-29I39.25
intestine, adult.CNhs10496.178-9A317.45
intestine, embryo E12.CNhs11019.1251-16I526.02
intestine, embryo E13.CNhs11010.381-16D531.35
intestine, embryo E15.CNhs10602.976-16D835.57
intestine, embryo E16.CNhs10585.463-22H425.61
intestine, embryo E17.CNhs10582.482-18D323.35
intestine, embryo E18.CNhs10526.1289-20F719.21
intestine, neonate N00.CNhs11126.644-26D115.18
intestine, neonate N01.CNhs11192.1322-23E916.31
intestine, neonate N06.CNhs11102.688-20B818.35
intestine, neonate N07.CNhs11095.720-20F219.30
intestine, neonate N10.CNhs11098.755-23A515.79
intestine, neonate N20.CNhs11187.827-18D118.88
intestine, neonate N25.CNhs11121.1352-25E314.48
intestine, neonate N30.CNhs11131.1384-42G114.34
kidney, embryo E14.CNhs10606.411-4I922.76
kidney, embryo E15.CNhs10997.434-16F821.14
kidney, embryo E16.CNhs10584.464-22A530.43
kidney, embryo E17.CNhs11028.483-18I218.33
kidney, embryo E18.CNhs11001.1288-20C720.17
kidney, neonate N00.CNhs11214.646-21G720.76
kidney, neonate N10.CNhs11206.758-6D525.42
kidney, neonate N20.CNhs11113.832-19I116.83
kidney, neonate N25.CNhs11122.1353-25F316.80
kidney, neonate N30.CNhs11203.1385-42H114.19
liver, adult pregnant day01.CNhs10466.508-5B28.60
liver, embryo E12.CNhs10601.355-15F828.03
liver, embryo E13.CNhs10524.378-3H622.60
liver, embryo E14.CNhs10594.409-16E123.16
liver, embryo E15.CNhs10520.433-16D727.18
liver, embryo E16.CNhs10523.462-17F521.22
liver, embryo E17.CNhs10510.481-18A315.28
liver, embryo E18.CNhs10579.499-43G417.26
liver, neonate N00.CNhs11117.641-24F423.35
liver, neonate N03.CNhs11123.1345-25G29.88
liver, neonate N06.CNhs11101.684-20A831.63
liver, neonate N07.CNhs11103.716-20H211.54
liver, neonate N10.CNhs11115.751-24B912.79
liver, neonate N20.CNhs11220.823-25A310.61
liver, neonate N25.CNhs11198.1368-26H113.45
liver, neonate N30.CNhs11106.1382-42D120.75
lung, adult.CNhs10474.28-22B121.62
lung, embryo E12.CNhs10522.354-16G226.91
lung, embryo E14.CNhs10604.404-26F830.47
lung, embryo E15.CNhs11020.432-17C520.88
lung, embryo E16.CNhs10998.458-17B622.30
lung, embryo E17.CNhs10605.480-44A635.01
lung, embryo E18.CNhs10583.1287-20I629.04
lung, neonate N00.CNhs11224.640-42C624.78
lung, neonate N06.CNhs11212.683-20E528.85
lung, neonate N07.CNhs11111.715-19A329.01
lung, neonate N10.CNhs11219.750-23E623.28
lung, neonate N20.CNhs11109.822-18A422.45
lung, neonate N25.CNhs11119.1359-25C716.06
lung, neonate N30.CNhs11133.1394-42H222.71
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A115.08
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.81
mammary gland, adult lactating day02.CNhs10480.595-22B611.80
mammary gland, adult pregnant day19.CNhs10476.588-5H219.87
medulla oblongata, adult.CNhs10477.17-12C230.34
medulla oblongata, neonate N30.CNhs11200.1396-42A328.13
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C711.97
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C219.95
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E127.45
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E227.33
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E332.10
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D723.42
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D832.08
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D942.18
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D431.17
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D525.13
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D639.13
olfactory brain, adult.CNhs10489.18-22I948.84
ovary, adult.CNhs10507.91-2I727.39
ovary, embryo E18.CNhs11040.505-44H714.96
ovary, neonate N00.CNhs11217.1299-22I424.27
oviduct, adult pregnant day01.CNhs10500.988-6G624.75
pancreas, adult.CNhs10486.34-16E429.20
pancreas, embryo E14.CNhs11012.405-44F417.97
pancreas, embryo E15.CNhs11042.1556-45F214.21
pancreas, embryo E16.CNhs11003.460-26E520.56
pancreas, embryo E17.CNhs10599.1558-45G320.38
pancreas, embryo E18.CNhs10580.1535-43I725.52
pancreas, neonate N00.CNhs11105.645-26G924.29
pancreas, neonate N01.CNhs11138.1531-43D725.08
pancreas, neonate N02.CNhs11139.1539-43D819.61
pancreas, neonate N16.CNhs11136.787-43B623.70
pancreas, neonate N25.CNhs11094.1555-45E220.03
pancreas, neonate N30.CNhs11182.1548-44H518.56
pituitary gland, adult.CNhs10493.21-1G841.87
pituitary gland, embryo E12.CNhs11018.346-16E628.99
pituitary gland, embryo E13.CNhs11009.370-44C720.05
pituitary gland, embryo E14.CNhs11037.398-44A519.29
pituitary gland, embryo E15.CNhs10592.427-16B928.91
pituitary gland, embryo E16.CNhs11036.449-43F627.65
pituitary gland, embryo E17.CNhs11039.1265-44F520.73
pituitary gland, neonate N00.CNhs11190.1308-22E919.49
placenta, adult pregnant day10.CNhs10472.539-13I712.20
placenta, adult pregnant day17.CNhs10464.577-18G312.92
prostate, adult.CNhs10470.859-1F819.41
skin, adult.CNhs10492.30-1C341.72
skin, neonate N00.CNhs11124.650-25G433.91
skin, neonate N03.CNhs11215.662-22H326.54
skin, neonate N06.CNhs11097.693-20I519.22
skin, neonate N10.CNhs11108.762-6C426.59
small intestine, neonate N16.CNhs11114.790-21I119.53
spinal cord, adult.CNhs10505.24-13C937.64
spleen, adult.CNhs10465.25-2G224.43
spleen, embryo E16.CNhs11035.461-43C116.72
spleen, embryo E18.CNhs11011.1271-21F220.37
spleen, neonate N10.CNhs11116.752-24D123.17
spleen, neonate N20.CNhs11112.824-19H126.66
spleen, neonate N25.CNhs11099.1354-25G323.79
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C614.79
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C914.41
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D313.54
stomach, adult.CNhs10503.33-1H69.55
stomach, embryo E12.CNhs10588.356-43E331.00
stomach, embryo E15.CNhs10603.1252-16G828.87
stomach, embryo E16.CNhs11022.459-17D417.71
stomach, embryo E17.CNhs11006.1035-18D520.07
stomach, embryo E18.CNhs10999.1286-20C615.50
stomach, neonate N03.CNhs11193.1340-24B816.99
stomach, neonate N07.CNhs11210.718-18A923.31
stomach, neonate N25.CNhs11104.1355-25E412.83
stomach, neonate N30.CNhs11134.1386-42I120.74
submandibular gland, adult.CNhs10469.59-29C114.91
testis, adult.CNhs10504.57-7G514.09
testis, embryo E13.CNhs11031.389-23F529.01
testis, embryo E15.CNhs11034.443-27C518.70
testis, embryo E16.CNhs11033.470-26G526.83
testis, embryo E17.CNhs11029.486-18I522.09
testis, embryo E18.CNhs11027.503-18G521.46
testis, neonate N00.CNhs11189.1300-22B728.17
testis, neonate N07.CNhs11222.726-26I419.53
testis, neonate N10.CNhs11204.763-44D927.89
testis, neonate N20.CNhs11110.839-18H317.39
testis, neonate N30.CNhs11130.1391-42E221.60
thymus, adult.CNhs10471.38-12B530.65
thymus, embryo E14.CNhs11041.402-44I412.37
thymus, embryo E15.CNhs11005.430-45I214.07
thymus, embryo E16.CNhs11002.456-26C516.50
thymus, embryo E17.CNhs10581.478-18C122.56
thymus, embryo E18.CNhs10595.1273-19G432.39
thymus, neonate N02.CNhs11181.1541-43F829.69
thymus, neonate N03.CNhs11137.2104-43C729.09
thymus, neonate N06.CNhs11197.681-26C432.92
thymus, neonate N07.CNhs11211.713-19D332.24
thymus, neonate N10.CNhs11194.748-24E433.88
thymus, neonate N20.CNhs11186.820-7A239.18
thymus, neonate N25.CNhs11125.1362-25G733.00
thymus, neonate N30.CNhs11132.1393-42G244.88
tongue, adult.CNhs10499.32-1B424.94
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H319.76
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F720.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G511.42
urinary bladder, adult.CNhs10481.879-12E423.38
uterus, adult pregnant day19.CNhs10497.590-15F512.39
uterus, adult.CNhs10509.92-27E525.64
vagina, adult.CNhs10502.89-27D519.72
vesicular gland, adult.CNhs10491.51-27F819.06
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A133.32
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A225.32
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A333.80
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D721.48
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A423.29
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A541.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A630.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A726.12
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A832.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A934.69
whole body, embryo E11.CNhs11014.324-5I829.79
whole body, embryo E12.CNhs10587.857-27C934.72
whole body, embryo E13.CNhs10512.372-23H233.63
whole body, embryo E14.5.CNhs10578.420-27D223.58
whole body, embryo E14.CNhs10519.395-14B120.54
whole body, embryo E16.CNhs10514.453-14F219.67
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G530.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G540.79
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G534.34
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G527.80
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G530.16
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G533.58
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G536.05
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G535.92
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G533.60
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G529.53
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G530.71
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G533.18
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G527.20
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G536.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G530.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G525.91
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G531.47
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G526.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G528.52
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G526.82
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G529.45
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G523.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G533.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G527.50
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G531.56
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G526.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G525.37
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G527.58
whole body, embryo E17.5.CNhs10513.490-9F928.55
whole body, embryo E17.CNhs10517.475-3I526.98
whole body, embryo E18.CNhs10516.493-3B326.67
whole body, neonate N00.CNhs10525.657-19C232.66
whole body, neonate N01.CNhs10576.659-23C630.99
whole body, neonate N06.CNhs10515.692-21D121.84
whole body, neonate N10.CNhs10518.761-6B425.27





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm2.85e-1064
neural plate2.85e-1064
presumptive neural plate2.85e-1064
ecto-epithelium5.09e-1073
pre-chordal neural plate1.82e-0949
ectoderm-derived structure2.24e-0995
ectoderm2.24e-0995
presumptive ectoderm2.24e-0995
central nervous system3.84e-0873
nervous system3.17e-0775
brain4.80e-0747
future brain4.80e-0747
neural tube7.08e-0752
neural rod7.08e-0752
future spinal cord7.08e-0752
neural keel7.08e-0752
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