FFCP PHASE1:Mm9::chr19:8994848..8994916,+: Difference between revisions
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{{FFCP|EntrezGene=72727|HGNC=|MCL_coexpression_id=1|UniProt=P58158,Q3USF3|association_with_transcript=0bp_to_ENSMUST00000096243,NM_024256,uc008gnz.1,uc008goa.1,uc008gob.1_5end|description=CAGE_peak_1_at_B3gat3_5end|id=chr19:8994848..8994916,+|ontology_enrichment_celltype=CL:0000117!4.98e-12!23;CL:0000337!4.98e-12!23;CL:0000221!3.04e-08!44;CL:0000133!3.04e-08!44;CL:0002319!7.15e-08!43|ontology_enrichment_celltype_v019_2=CL:0000117,4.98e-12,23;CL:0000337,4.98e-12,23;CL:0000221,3.04e-08,44;CL:0000133,3.04e-08,44;CL:0002319,7.15e-08,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!5.82e-25!63;UBERON:0001049!1.89e-23!52;UBERON:0005068!1.89e-23!52;UBERON:0006241!1.89e-23!52;UBERON:0007135!1.89e-23!52;UBERON:0000955!5.57e-23!50;UBERON:0006238!5.57e-23!50;UBERON:0000073!9.05e-23!75;UBERON:0001016!9.05e-23!75;UBERON:0002616!2.40e-22!49;UBERON:0001017!3.33e-22!73;UBERON:0005743!3.33e-22!73;UBERON:0004121!9.35e-21!102;UBERON:0000924!9.35e-21!102;UBERON:0006601!9.35e-21!102;UBERON:0003056!7.99e-19!49;UBERON:0002346!1.80e-18!71;UBERON:0003075!1.80e-18!71;UBERON:0007284!1.80e-18!71;UBERON:0003080!3.63e-17!40;UBERON:0002020!1.07e-16!34;UBERON:0002780!1.82e-16!39;UBERON:0001890!1.82e-16!39;UBERON:0006240!1.82e-16!39;UBERON:0007811!1.21e-15!86;UBERON:0000153!2.36e-14!94;UBERON:0002791!2.49e-14!29;UBERON:0003528!2.49e-14!29;UBERON:0001893!2.49e-14!29;UBERON:0000956!6.28e-10!21;UBERON:0001869!6.28e-10!21;UBERON:0000203!6.28e-10!21;UBERON:0002619!1.87e-08!17;UBERON:0002021!2.84e-07!10;UBERON:0000411!2.84e-07!10;UBERON:0001950!2.84e-07!10;UBERON:0003076!6.27e-07!12;UBERON:0003057!6.27e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.90e-25,54;UBERON:0004121,7.95e-24,95;UBERON:0000924,7.95e-24,95;UBERON:0006601,7.95e-24,95;UBERON:0001049,1.89e-23,52;UBERON:0005068,1.89e-23,52;UBERON:0006241,1.89e-23,52;UBERON:0007135,1.89e-23,52;UBERON:0001016,9.05e-23,75;UBERON:0002346,2.69e-22,64;UBERON:0003075,2.69e-22,64;UBERON:0007284,2.69e-22,64;UBERON:0001017,3.33e-22,73;UBERON:0010371,3.20e-21,73;UBERON:0000955,8.14e-21,47;UBERON:0006238,8.14e-21,47;UBERON:0002616,3.40e-20,46;UBERON:0003056,7.99e-19,49;UBERON:0003080,3.63e-17,40;UBERON:0002020,1.07e-16,34;UBERON:0002780,1.82e-16,39;UBERON:0001890,1.82e-16,39;UBERON:0006240,1.82e-16,39;UBERON:0003528,2.49e-14,29;UBERON:0002791,2.49e-14,29;UBERON:0001893,2.49e-14,29;UBERON:0000956,6.28e-10,21;UBERON:0001869,6.28e-10,21;UBERON:0000203,6.28e-10,21;UBERON:0010314,1.23e-09,92;UBERON:0002619,1.87e-08,17;UBERON:0002021,2.84e-07,10;UBERON:0000411,2.84e-07,10;UBERON:0001950,2.84e-07,10;UBERON:0003076,6.27e-07,12;UBERON:0003057,6.27e-07,12|phase1_expression=30.9087274912252,12.9120900826564,15.4699741392442,20.8700305801713,20.5367249278002,19.3061162698673,19.1562365288331,35.8962839167582,12.3894075493467,11.7032263160997,19.5188483777076,23.2934704266382,23.9681021903688,34.531058955504,14.9899392817048,21.2599030759317,11.1929900500503,36.4358800988765,38.8033847104241,45.8340823941873,27.5540260089466,24.0284101906142,20.8959831311148,23.0389088822506,22.940928106717,15.5042630311055,18.0920038386811,17.0222273821852,18.0522248483555,18.146169342715,22.8382425974964,17.7808588568697,25.8327210785519,31.6963362030877,17.6199488048278,13.7974755647549,21.8461211200735,36.8307835048479,24.2213956802378,33.5055196143231,29.4115744015507,32.1031377930469,45.6379731849284,13.5968563413623,12.2666086775613,12.4811791469943,44.5963066278382,23.3286917327078,20.2111288115714,21.7761486963197,16.0984384869167,24.4379359420452,40.4356080599145,31.9159342484992,31.5928171193916,5.40244815675489,12.0344044774278,9.7977697532714,55.2323938146702,56.0730438028355,52.6080064910129,19.6529828600097,16.8966011261116,45.8948855813513,53.3987835786166,49.733608046227,33.2556122675429,46.4904149439081,31.0031940802348,34.021496459586,29.2351696278421,54.2736870367227,59.8553745978873,31.970098595103,32.3957692041639,31.2534387447407,92.4973400394865,71.7602840038755,71.8878575639219,52.8864013798077,50.8671298429398,53.1331637967895,82.3589847054074,59.0900740533264,66.772834278466,40.0694876244188,39.2945839005524,33.7382996943794,31.8807273932705,24.1828992341714,29.2763133588695,38.7190744641624,14.9593693415705,24.8263468153396,20.7928453583254,22.4013443548668,24.1564402626613,14.3161470965569,16.8860902991865,14.4869225549239,39.5770009572472,24.3820307087204,35.6727335589304,14.2213340630666,12.123498296628,12.4146334082798,14.1546844604139,21.9233049060595,39.3585583143701,18.1099409659086,15.6136794089522,16.1366703505435,16.8349312996923,18.6896074285252,18.5790157274414,16.5879900555172,23.7307169024999,16.4843266888699,16.8076004870476,16.6619855445831,16.7839554029899,15.5160081003271,13.0474232852686,60.0200633873672,61.5773318031558,19.1592791406444,13.4192939446631,19.196887391789,14.6130761134024,75.0451103418162,62.6775825861518,41.5915905493581,72.6585658403716,66.2303034485556,92.6734678735638,65.7077115424418,20.673390861614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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:72727 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P58158,uniprot:Q3USF3 | |||
|association_with_transcript=0bp_to_ENSMUST00000096243,NM_024256,uc008gnz.1,uc008goa.1,uc008gob.1_5end | |||
|cluster_id=chr19:8994848..8994916,+ | |||
|description=CAGE_peak_1_at_B3gat3_5end | |||
|id=chr19:8994848..8994916,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.98e-12!23;CL:0000337!4.98e-12!23;CL:0000221!3.04e-08!44;CL:0000133!3.04e-08!44;CL:0002319!7.15e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.98e-12,23;CL:0000337,4.98e-12,23;CL:0000221,3.04e-08,44;CL:0000133,3.04e-08,44;CL:0002319,7.15e-08,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!5.82e-25!63;UBERON:0001049!1.89e-23!52;UBERON:0005068!1.89e-23!52;UBERON:0006241!1.89e-23!52;UBERON:0007135!1.89e-23!52;UBERON:0000955!5.57e-23!50;UBERON:0006238!5.57e-23!50;UBERON:0000073!9.05e-23!75;UBERON:0001016!9.05e-23!75;UBERON:0002616!2.40e-22!49;UBERON:0001017!3.33e-22!73;UBERON:0005743!3.33e-22!73;UBERON:0004121!9.35e-21!102;UBERON:0000924!9.35e-21!102;UBERON:0006601!9.35e-21!102;UBERON:0003056!7.99e-19!49;UBERON:0002346!1.80e-18!71;UBERON:0003075!1.80e-18!71;UBERON:0007284!1.80e-18!71;UBERON:0003080!3.63e-17!40;UBERON:0002020!1.07e-16!34;UBERON:0002780!1.82e-16!39;UBERON:0001890!1.82e-16!39;UBERON:0006240!1.82e-16!39;UBERON:0007811!1.21e-15!86;UBERON:0000153!2.36e-14!94;UBERON:0002791!2.49e-14!29;UBERON:0003528!2.49e-14!29;UBERON:0001893!2.49e-14!29;UBERON:0000956!6.28e-10!21;UBERON:0001869!6.28e-10!21;UBERON:0000203!6.28e-10!21;UBERON:0002619!1.87e-08!17;UBERON:0002021!2.84e-07!10;UBERON:0000411!2.84e-07!10;UBERON:0001950!2.84e-07!10;UBERON:0003076!6.27e-07!12;UBERON:0003057!6.27e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.90e-25,54;UBERON:0004121,7.95e-24,95;UBERON:0000924,7.95e-24,95;UBERON:0006601,7.95e-24,95;UBERON:0001049,1.89e-23,52;UBERON:0005068,1.89e-23,52;UBERON:0006241,1.89e-23,52;UBERON:0007135,1.89e-23,52;UBERON:0001016,9.05e-23,75;UBERON:0002346,2.69e-22,64;UBERON:0003075,2.69e-22,64;UBERON:0007284,2.69e-22,64;UBERON:0001017,3.33e-22,73;UBERON:0010371,3.20e-21,73;UBERON:0000955,8.14e-21,47;UBERON:0006238,8.14e-21,47;UBERON:0002616,3.40e-20,46;UBERON:0003056,7.99e-19,49;UBERON:0003080,3.63e-17,40;UBERON:0002020,1.07e-16,34;UBERON:0002780,1.82e-16,39;UBERON:0001890,1.82e-16,39;UBERON:0006240,1.82e-16,39;UBERON:0003528,2.49e-14,29;UBERON:0002791,2.49e-14,29;UBERON:0001893,2.49e-14,29;UBERON:0000956,6.28e-10,21;UBERON:0001869,6.28e-10,21;UBERON:0000203,6.28e-10,21;UBERON:0010314,1.23e-09,92;UBERON:0002619,1.87e-08,17;UBERON:0002021,2.84e-07,10;UBERON:0000411,2.84e-07,10;UBERON:0001950,2.84e-07,10;UBERON:0003076,6.27e-07,12;UBERON:0003057,6.27e-07,12 | |||
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| |||
|short_description=p1@B3gat3 | |||
}} |
Revision as of 14:11, 4 August 2015
Short description: | p1@B3gat3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_B3gat3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000096243, NM_024256, uc008gnz.1, uc008goa.1, uc008gob.1_5end |
EntrezGene: | 72727 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.98e-12 | 23 |
neuroblast (sensu Vertebrata) | 4.98e-12 | 23 |
ectodermal cell | 3.04e-08 | 44 |
neurectodermal cell | 3.04e-08 | 44 |
neural cell | 7.15e-08 | 43 |