FFCP PHASE1:Mm9::chr7:148877193..148877223,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=273|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:148877193..148877223,+|id=chr7:148877193..148877223,+|ontology_enrichment_celltype=CL:0002563!2.52e-10!9;CL:0002251!2.52e-10!9;CL:0000473!7.28e-09!3;CL:0000627!7.28e-09!3;CL:0000682!7.28e-09!3;CL:0000239!8.02e-08!6;CL:0000677!8.02e-08!6;CL:0000212!8.02e-08!6;CL:0000584!8.02e-08!6;CL:0000066!2.78e-07!25|ontology_enrichment_celltype_v019_2=CL:0000239,3.47e-11,6;CL:0000677,3.47e-11,6;CL:0000584,3.47e-11,6;CL:0000075,1.32e-09,7;CL:0002563,1.71e-07,9;CL:0002251,1.71e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.47e-26!43;UBERON:0000344!1.33e-24!15;UBERON:0005409!8.04e-20!59;UBERON:0001242!1.11e-19!13;UBERON:0000060!1.11e-19!13;UBERON:0001262!1.11e-19!13;UBERON:0004786!1.11e-19!13;UBERON:0004923!2.11e-14!24;UBERON:0003350!2.52e-10!9;UBERON:0004808!2.52e-10!9;UBERON:0001277!2.52e-10!9;UBERON:0000331!1.62e-09!3;UBERON:0002116!1.62e-09!3;UBERON:0001204!1.62e-09!3;UBERON:0001168!1.62e-09!3;UBERON:0000485!2.51e-08!11;UBERON:0001007!3.47e-08!128;UBERON:0001555!3.47e-08!128;UBERON:0007026!3.47e-08!128;UBERON:0004119!5.63e-08!130;UBERON:0000925!5.63e-08!130;UBERON:0006595!5.63e-08!130;UBERON:0001155!9.88e-07!2;UBERON:0001962!9.88e-07!2;UBERON:0001961!9.88e-07!2;UBERON:0001744!9.88e-07!2;UBERON:0000059!9.88e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.93e-31,31;UBERON:0000344,4.98e-26,15;UBERON:0005409,2.43e-22,47;UBERON:0001242,2.43e-19,13;UBERON:0001262,2.43e-19,13;UBERON:0004786,2.43e-19,13;UBERON:0002108,6.79e-17,4;UBERON:0004923,1.11e-15,24;UBERON:0000331,2.19e-13,3;UBERON:0002116,2.19e-13,3;UBERON:0001204,2.19e-13,3;UBERON:0001168,2.19e-13,3;UBERON:0001007,1.17e-09,116;UBERON:0001555,1.17e-09,116;UBERON:0007026,1.17e-09,116;UBERON:0004119,1.94e-09,118;UBERON:0000925,1.94e-09,118;UBERON:0006595,1.94e-09,118;UBERON:0001155,2.95e-09,2;UBERON:0001962,2.95e-09,2;UBERON:0001961,2.95e-09,2;UBERON:0001744,2.95e-09,2;UBERON:0000059,2.95e-09,2;UBERON:0003350,1.71e-07,9;UBERON:0004808,1.71e-07,9;UBERON:0001277,1.71e-07,9;UBERON:0004921,1.82e-07,114|phase1_expression=0,0,0,1.51232105653415,1.00179145989269,21.9921846204576,21.9595882159794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.43974237497583,3.89995777814189,0.57423196411502,3.87685796543167,6.24866574789078,20.5225293012884,15.8778981748756,2.43903561720835,0,0,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,1.48439043634778,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,7.45567044872489,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,1.58670339998127,0,0,0,0,0.444756087689741,0.760902504450237,4.2707615539006,0.658795818896044,1.50801125280162,0.795825888164603,0,0,8.64552199498777,7.36822711041159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.24037433229482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr7:148877193..148877223,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=273 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:148877193..148877223,+ | |||
|description=CAGE_peak_at_chr7:148877193..148877223,+ | |||
|id=chr7:148877193..148877223,+ | |||
|ontology_enrichment_celltype=CL:0002563!2.52e-10!9;CL:0002251!2.52e-10!9;CL:0000473!7.28e-09!3;CL:0000627!7.28e-09!3;CL:0000682!7.28e-09!3;CL:0000239!8.02e-08!6;CL:0000677!8.02e-08!6;CL:0000212!8.02e-08!6;CL:0000584!8.02e-08!6;CL:0000066!2.78e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.47e-11,6;CL:0000677,3.47e-11,6;CL:0000584,3.47e-11,6;CL:0000075,1.32e-09,7;CL:0002563,1.71e-07,9;CL:0002251,1.71e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.47e-26!43;UBERON:0000344!1.33e-24!15;UBERON:0005409!8.04e-20!59;UBERON:0001242!1.11e-19!13;UBERON:0000060!1.11e-19!13;UBERON:0001262!1.11e-19!13;UBERON:0004786!1.11e-19!13;UBERON:0004923!2.11e-14!24;UBERON:0003350!2.52e-10!9;UBERON:0004808!2.52e-10!9;UBERON:0001277!2.52e-10!9;UBERON:0000331!1.62e-09!3;UBERON:0002116!1.62e-09!3;UBERON:0001204!1.62e-09!3;UBERON:0001168!1.62e-09!3;UBERON:0000485!2.51e-08!11;UBERON:0001007!3.47e-08!128;UBERON:0001555!3.47e-08!128;UBERON:0007026!3.47e-08!128;UBERON:0004119!5.63e-08!130;UBERON:0000925!5.63e-08!130;UBERON:0006595!5.63e-08!130;UBERON:0001155!9.88e-07!2;UBERON:0001962!9.88e-07!2;UBERON:0001961!9.88e-07!2;UBERON:0001744!9.88e-07!2;UBERON:0000059!9.88e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.93e-31,31;UBERON:0000344,4.98e-26,15;UBERON:0005409,2.43e-22,47;UBERON:0001242,2.43e-19,13;UBERON:0001262,2.43e-19,13;UBERON:0004786,2.43e-19,13;UBERON:0002108,6.79e-17,4;UBERON:0004923,1.11e-15,24;UBERON:0000331,2.19e-13,3;UBERON:0002116,2.19e-13,3;UBERON:0001204,2.19e-13,3;UBERON:0001168,2.19e-13,3;UBERON:0001007,1.17e-09,116;UBERON:0001555,1.17e-09,116;UBERON:0007026,1.17e-09,116;UBERON:0004119,1.94e-09,118;UBERON:0000925,1.94e-09,118;UBERON:0006595,1.94e-09,118;UBERON:0001155,2.95e-09,2;UBERON:0001962,2.95e-09,2;UBERON:0001961,2.95e-09,2;UBERON:0001744,2.95e-09,2;UBERON:0000059,2.95e-09,2;UBERON:0003350,1.71e-07,9;UBERON:0004808,1.71e-07,9;UBERON:0001277,1.71e-07,9;UBERON:0004921,1.82e-07,114 | |||
|phase1_expression=0,0,0,1.51232105653415,1.00179145989269,21.9921846204576,21.9595882159794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.43974237497583,3.89995777814189,0.57423196411502,3.87685796543167,6.24866574789078,20.5225293012884,15.8778981748756,2.43903561720835,0,0,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,1.48439043634778,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,7.45567044872489,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,1.58670339998127,0,0,0,0,0.444756087689741,0.760902504450237,4.2707615539006,0.658795818896044,1.50801125280162,0.795825888164603,0,0,8.64552199498777,7.36822711041159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.24037433229482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr7:148877193..148877223,+ | |||
}} |
Latest revision as of 13:13, 4 August 2015
Short description: | p@chr7:148877193..148877223, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:148877193..148877223, + |
Coexpression cluster: | MCL_coexpression_mm9:273 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.47e-11 | 6 |
gut absorptive cell | 3.47e-11 | 6 |
enterocyte | 3.47e-11 | 6 |
columnar/cuboidal epithelial cell | 1.32e-09 | 7 |
intestinal epithelial cell | 1.71e-07 | 9 |
epithelial cell of alimentary canal | 1.71e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.93e-31 | 31 |
mucosa | 4.98e-26 | 15 |
gastrointestinal system | 2.43e-22 | 47 |
intestinal mucosa | 2.43e-19 | 13 |
wall of intestine | 2.43e-19 | 13 |
gastrointestinal system mucosa | 2.43e-19 | 13 |
small intestine | 6.79e-17 | 4 |
organ component layer | 1.11e-15 | 24 |
ileal mucosa | 2.19e-13 | 3 |
ileum | 2.19e-13 | 3 |
mucosa of small intestine | 2.19e-13 | 3 |
wall of small intestine | 2.19e-13 | 3 |
digestive system | 1.17e-09 | 116 |
digestive tract | 1.17e-09 | 116 |
primitive gut | 1.17e-09 | 116 |
endoderm-derived structure | 1.94e-09 | 118 |
endoderm | 1.94e-09 | 118 |
presumptive endoderm | 1.94e-09 | 118 |
colon | 2.95e-09 | 2 |
gut-associated lymphoid tissue | 2.95e-09 | 2 |
mucosa-associated lymphoid tissue | 2.95e-09 | 2 |
lymphoid tissue | 2.95e-09 | 2 |
large intestine | 2.95e-09 | 2 |
epithelium of mucosa | 1.71e-07 | 9 |
gastrointestinal system epithelium | 1.71e-07 | 9 |
intestinal epithelium | 1.71e-07 | 9 |
subdivision of digestive tract | 1.82e-07 | 114 |