FFCP PHASE1:Mm9::chr19:7280751..7280791,-: Difference between revisions
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{{FFCP|EntrezGene=107260|HGNC=|MCL_coexpression_id=3078|UniProt=Q7TQI3|association_with_transcript=0bp_to_NM_134150,uc008gki.1_5end|description=CAGE_peak_1_at_Otub1_5end|id=chr19:7280751..7280791,-|ontology_enrichment_celltype=CL:0000221!9.84e-13!44;CL:0000133!9.84e-13!44;CL:0000055!1.17e-12!50;CL:0002319!1.19e-12!43;CL:0000117!5.11e-12!23;CL:0000337!5.11e-12!23;CL:0000393!2.12e-10!39;CL:0000211!2.12e-10!39;CL:0000540!1.10e-09!33;CL:0000047!1.10e-09!33;CL:0000031!1.10e-09!33;CL:0000404!1.10e-09!33|ontology_enrichment_celltype_v019_2=CL:0000221,9.84e-13,44;CL:0000133,9.84e-13,44;CL:0002319,1.19e-12,43;CL:0000117,5.11e-12,23;CL:0000337,5.11e-12,23;CL:0000393,2.12e-10,39;CL:0000211,2.12e-10,39;CL:0000540,1.10e-09,33;CL:0000047,1.10e-09,33;CL:0000031,1.10e-09,33;CL:0000404,1.10e-09,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.18e-28!75;UBERON:0001016!1.18e-28!75;UBERON:0001017!3.90e-28!73;UBERON:0005743!3.90e-28!73;UBERON:0004121!1.30e-26!102;UBERON:0000924!1.30e-26!102;UBERON:0006601!1.30e-26!102;UBERON:0002346!9.27e-26!71;UBERON:0003075!9.27e-26!71;UBERON:0007284!9.27e-26!71;UBERON:0001049!7.06e-25!52;UBERON:0005068!7.06e-25!52;UBERON:0006241!7.06e-25!52;UBERON:0007135!7.06e-25!52;UBERON:0000955!3.99e-24!50;UBERON:0006238!3.99e-24!50;UBERON:0002616!1.23e-23!49;UBERON:0000033!1.22e-22!63;UBERON:0003080!6.57e-19!40;UBERON:0003056!9.93e-19!49;UBERON:0002780!3.39e-18!39;UBERON:0001890!3.39e-18!39;UBERON:0006240!3.39e-18!39;UBERON:0002020!8.40e-18!34;UBERON:0002791!8.38e-16!29;UBERON:0003528!8.38e-16!29;UBERON:0001893!8.38e-16!29;UBERON:0000153!3.42e-12!94;UBERON:0007811!5.53e-12!86;UBERON:0000956!2.88e-11!21;UBERON:0001869!2.88e-11!21;UBERON:0000203!2.88e-11!21;UBERON:0002619!1.57e-09!17;UBERON:0000025!5.15e-09!114;UBERON:0004111!4.64e-08!122;UBERON:0002021!8.53e-07!10;UBERON:0000411!8.53e-07!10;UBERON:0001950!8.53e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.18e-28,75;UBERON:0001017,3.90e-28,73;UBERON:0000073,6.86e-26,54;UBERON:0010314,1.10e-25,92;UBERON:0004121,3.05e-25,95;UBERON:0000924,3.05e-25,95;UBERON:0006601,3.05e-25,95;UBERON:0001049,7.06e-25,52;UBERON:0005068,7.06e-25,52;UBERON:0006241,7.06e-25,52;UBERON:0007135,7.06e-25,52;UBERON:0002346,7.61e-25,64;UBERON:0003075,7.61e-25,64;UBERON:0007284,7.61e-25,64;UBERON:0000955,2.07e-22,47;UBERON:0006238,2.07e-22,47;UBERON:0002616,6.24e-22,46;UBERON:0010371,3.53e-21,73;UBERON:0003080,6.57e-19,40;UBERON:0003056,9.93e-19,49;UBERON:0002780,3.39e-18,39;UBERON:0001890,3.39e-18,39;UBERON:0006240,3.39e-18,39;UBERON:0002020,8.40e-18,34;UBERON:0003528,8.38e-16,29;UBERON:0002791,8.38e-16,29;UBERON:0001893,8.38e-16,29;UBERON:0000956,2.88e-11,21;UBERON:0001869,2.88e-11,21;UBERON:0000203,2.88e-11,21;UBERON:0002619,1.57e-09,17;UBERON:0000025,5.15e-09,114;UBERON:0004111,4.64e-08,122;UBERON:0002021,8.53e-07,10;UBERON:0000411,8.53e-07,10;UBERON:0001950,8.53e-07,10|phase1_expression=112.58463951467,73.9827864195446,77.8048699356107,43.8573106394904,45.5815114251176,63.7941233265181,67.2804404915114,74.7624042726727,79.6864167378434,75.1347129493599,77.3905216379282,85.4359822840053,66.4258832133078,79.7274070061256,38.3076226088012,55.0732727300327,53.8662646158673,64.985206063797,62.1128384233997,44.9853030905912,122.037121366785,128.283908951544,119.890703214771,100.795226359846,92.9107588322039,82.6894028325629,94.7676391549964,93.2990437529899,109.263466187415,83.9260332100569,102.439495922751,165.743005772964,130.393734967929,190.178017218526,65.2804660637881,70.9821935680762,60.2299600973989,143.556349342759,121.888313745713,158.627694424061,114.705140166048,114.06859598806,152.935761204813,150.57259429879,148.31445037415,144.08420044692,302.003058918343,134.521521486736,220.125555099941,132.406761269587,102.470060629765,175.378128525265,63.7573903019398,56.5782470768849,66.2104784310654,135.061203918872,104.298172137707,120.667269592921,213.646182667735,256.560624946936,234.517619297286,243.968063089775,202.75921351334,182.229692749483,211.617401589333,196.092511725124,189.64686995815,278.558271358127,177.205547435188,165.112262579658,176.041992651107,205.668708770739,202.315583511678,186.308505605945,177.026584970683,164.540162803194,167.376139119071,232.007893300786,232.867504416465,221.305190811265,235.306219345398,222.950922598293,295.375612943461,238.048584043401,196.804143136531,143.189492540203,159.741025856593,192.550627537535,146.908815066377,131.721229266127,59.4222201838439,78.2985728053062,77.5167320426836,82.0348851289482,82.521605015854,58.691522209751,87.0755404816861,153.216859997674,146.519306596018,118.722097035474,126.759077799012,48.7640614174408,12.7402619853323,14.2213340630666,106.297101136506,113.251859867369,99.0827912228975,76.5031994117702,71.7257937702666,135.824557244315,139.655688046739,138.227327153712,135.601912386562,131.128697280782,118.999771621333,114.859264475323,139.170766834453,60.4425311925231,71.6534547079398,85.7364304721269,68.9025537596428,55.760654110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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:107260 | |||
|HGNC= | |||
|MCL_coexpression_id=3078 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q7TQI3 | |||
|association_with_transcript=0bp_to_NM_134150,uc008gki.1_5end | |||
|cluster_id=chr19:7280751..7280791,- | |||
|description=CAGE_peak_1_at_Otub1_5end | |||
|id=chr19:7280751..7280791,- | |||
|ontology_enrichment_celltype=CL:0000221!9.84e-13!44;CL:0000133!9.84e-13!44;CL:0000055!1.17e-12!50;CL:0002319!1.19e-12!43;CL:0000117!5.11e-12!23;CL:0000337!5.11e-12!23;CL:0000393!2.12e-10!39;CL:0000211!2.12e-10!39;CL:0000540!1.10e-09!33;CL:0000047!1.10e-09!33;CL:0000031!1.10e-09!33;CL:0000404!1.10e-09!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,9.84e-13,44;CL:0000133,9.84e-13,44;CL:0002319,1.19e-12,43;CL:0000117,5.11e-12,23;CL:0000337,5.11e-12,23;CL:0000393,2.12e-10,39;CL:0000211,2.12e-10,39;CL:0000540,1.10e-09,33;CL:0000047,1.10e-09,33;CL:0000031,1.10e-09,33;CL:0000404,1.10e-09,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.18e-28!75;UBERON:0001016!1.18e-28!75;UBERON:0001017!3.90e-28!73;UBERON:0005743!3.90e-28!73;UBERON:0004121!1.30e-26!102;UBERON:0000924!1.30e-26!102;UBERON:0006601!1.30e-26!102;UBERON:0002346!9.27e-26!71;UBERON:0003075!9.27e-26!71;UBERON:0007284!9.27e-26!71;UBERON:0001049!7.06e-25!52;UBERON:0005068!7.06e-25!52;UBERON:0006241!7.06e-25!52;UBERON:0007135!7.06e-25!52;UBERON:0000955!3.99e-24!50;UBERON:0006238!3.99e-24!50;UBERON:0002616!1.23e-23!49;UBERON:0000033!1.22e-22!63;UBERON:0003080!6.57e-19!40;UBERON:0003056!9.93e-19!49;UBERON:0002780!3.39e-18!39;UBERON:0001890!3.39e-18!39;UBERON:0006240!3.39e-18!39;UBERON:0002020!8.40e-18!34;UBERON:0002791!8.38e-16!29;UBERON:0003528!8.38e-16!29;UBERON:0001893!8.38e-16!29;UBERON:0000153!3.42e-12!94;UBERON:0007811!5.53e-12!86;UBERON:0000956!2.88e-11!21;UBERON:0001869!2.88e-11!21;UBERON:0000203!2.88e-11!21;UBERON:0002619!1.57e-09!17;UBERON:0000025!5.15e-09!114;UBERON:0004111!4.64e-08!122;UBERON:0002021!8.53e-07!10;UBERON:0000411!8.53e-07!10;UBERON:0001950!8.53e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.18e-28,75;UBERON:0001017,3.90e-28,73;UBERON:0000073,6.86e-26,54;UBERON:0010314,1.10e-25,92;UBERON:0004121,3.05e-25,95;UBERON:0000924,3.05e-25,95;UBERON:0006601,3.05e-25,95;UBERON:0001049,7.06e-25,52;UBERON:0005068,7.06e-25,52;UBERON:0006241,7.06e-25,52;UBERON:0007135,7.06e-25,52;UBERON:0002346,7.61e-25,64;UBERON:0003075,7.61e-25,64;UBERON:0007284,7.61e-25,64;UBERON:0000955,2.07e-22,47;UBERON:0006238,2.07e-22,47;UBERON:0002616,6.24e-22,46;UBERON:0010371,3.53e-21,73;UBERON:0003080,6.57e-19,40;UBERON:0003056,9.93e-19,49;UBERON:0002780,3.39e-18,39;UBERON:0001890,3.39e-18,39;UBERON:0006240,3.39e-18,39;UBERON:0002020,8.40e-18,34;UBERON:0003528,8.38e-16,29;UBERON:0002791,8.38e-16,29;UBERON:0001893,8.38e-16,29;UBERON:0000956,2.88e-11,21;UBERON:0001869,2.88e-11,21;UBERON:0000203,2.88e-11,21;UBERON:0002619,1.57e-09,17;UBERON:0000025,5.15e-09,114;UBERON:0004111,4.64e-08,122;UBERON:0002021,8.53e-07,10;UBERON:0000411,8.53e-07,10;UBERON:0001950,8.53e-07,10 | |||
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| |||
|short_description=p1@Otub1 | |||
}} |
Revision as of 13:11, 4 August 2015
Short description: | p1@Otub1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Otub1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3078 |
Association with transcript: | 0bp_to_NM_134150, uc008gki.1_5end |
EntrezGene: | 107260 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 9.84e-13 | 44 |
neurectodermal cell | 9.84e-13 | 44 |
neural cell | 1.19e-12 | 43 |
CNS neuron (sensu Vertebrata) | 5.11e-12 | 23 |
neuroblast (sensu Vertebrata) | 5.11e-12 | 23 |
electrically responsive cell | 2.12e-10 | 39 |
electrically active cell | 2.12e-10 | 39 |
neuron | 1.10e-09 | 33 |
neuronal stem cell | 1.10e-09 | 33 |
neuroblast | 1.10e-09 | 33 |
electrically signaling cell | 1.10e-09 | 33 |