FFCP PHASE1:Mm9::chr19:6497587..6497666,+: Difference between revisions
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{{FFCP|EntrezGene=18190|HGNC=|MCL_coexpression_id=39|UniProt=|association_with_transcript=-4bp_to_ENSMUST00000148391_5end|description=CAGE_peak_1_at_Nrxn2_5end|id=chr19:6497587..6497666,+|ontology_enrichment_celltype=CL:0000117!9.56e-13!23;CL:0000337!9.56e-13!23;CL:0000221!1.87e-12!44;CL:0000133!1.87e-12!44;CL:0002319!2.65e-12!43;CL:0000540!2.60e-10!33;CL:0000047!2.60e-10!33;CL:0000031!2.60e-10!33;CL:0000404!2.60e-10!33;CL:0000055!1.68e-09!50;CL:0000393!1.32e-07!39;CL:0000211!1.32e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,5.69e-13,23;CL:0000337,5.69e-13,23;CL:0000221,1.13e-12,44;CL:0000133,1.13e-12,44;CL:0002319,1.61e-12,43;CL:0000540,1.73e-10,33;CL:0000047,1.73e-10,33;CL:0000031,1.73e-10,33;CL:0000404,1.73e-10,33;CL:0000393,8.13e-08,39;CL:0000211,8.13e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.32e-31!73;UBERON:0005743!1.32e-31!73;UBERON:0004121!1.68e-31!102;UBERON:0000924!1.68e-31!102;UBERON:0006601!1.68e-31!102;UBERON:0000073!1.06e-30!75;UBERON:0001016!1.06e-30!75;UBERON:0002346!7.56e-30!71;UBERON:0003075!7.56e-30!71;UBERON:0007284!7.56e-30!71;UBERON:0000033!1.37e-28!63;UBERON:0001049!7.29e-28!52;UBERON:0005068!7.29e-28!52;UBERON:0006241!7.29e-28!52;UBERON:0007135!7.29e-28!52;UBERON:0000955!8.16e-27!50;UBERON:0006238!8.16e-27!50;UBERON:0002616!4.17e-26!49;UBERON:0003056!5.45e-23!49;UBERON:0003080!9.92e-21!40;UBERON:0002780!4.10e-20!39;UBERON:0001890!4.10e-20!39;UBERON:0006240!4.10e-20!39;UBERON:0002020!1.48e-19!34;UBERON:0002791!1.17e-16!29;UBERON:0003528!1.17e-16!29;UBERON:0001893!1.17e-16!29;UBERON:0000956!1.58e-12!21;UBERON:0001869!1.58e-12!21;UBERON:0000203!1.58e-12!21;UBERON:0007811!2.82e-12!86;UBERON:0000153!3.59e-11!94;UBERON:0002619!1.06e-10!17;UBERON:0002021!4.99e-08!10;UBERON:0000411!4.99e-08!10;UBERON:0001950!4.99e-08!10;UBERON:0003076!1.39e-07!12;UBERON:0003057!1.39e-07!12;UBERON:0000468!6.19e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.24e-32,73;UBERON:0001016,2.73e-31,75;UBERON:0004121,5.55e-31,95;UBERON:0000924,5.55e-31,95;UBERON:0006601,5.55e-31,95;UBERON:0002346,6.01e-30,64;UBERON:0003075,6.01e-30,64;UBERON:0007284,6.01e-30,64;UBERON:0000073,7.41e-30,54;UBERON:0010371,8.81e-29,73;UBERON:0001049,2.14e-28,52;UBERON:0005068,2.14e-28,52;UBERON:0006241,2.14e-28,52;UBERON:0007135,2.14e-28,52;UBERON:0000955,2.68e-25,47;UBERON:0006238,2.68e-25,47;UBERON:0002616,1.38e-24,46;UBERON:0003056,2.01e-23,49;UBERON:0010314,2.54e-22,92;UBERON:0003080,4.07e-21,40;UBERON:0002780,1.73e-20,39;UBERON:0001890,1.73e-20,39;UBERON:0006240,1.73e-20,39;UBERON:0002020,6.42e-20,34;UBERON:0003528,5.82e-17,29;UBERON:0002791,5.82e-17,29;UBERON:0001893,5.82e-17,29;UBERON:0000956,9.49e-13,21;UBERON:0001869,9.49e-13,21;UBERON:0000203,9.49e-13,21;UBERON:0002619,6.93e-11,17;UBERON:0002021,3.69e-08,10;UBERON:0000411,3.69e-08,10;UBERON:0001950,3.69e-08,10;UBERON:0003076,1.05e-07,12;UBERON:0003057,1.05e-07,12|phase1_expression=73.6684696682052,0.348975407639361,0,0,0,0,0,0,0.140788722151667,0,0.171217968225505,0,0,0,0.333109761815663,0,0,0,0,0,67.3542857996473,14.3971879241284,22.4631818659484,0,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,1.6366586336825,1.31790010585369,0,54.7673941043627,35.1020501772519,26.1426557454021,35.3862416315196,22.2578410384326,24.4379359420452,0,0,0,3.34437266846731,4.58453503902011,1.03134418455488,178.645434939025,232.756030879694,250.363404384941,5.76035704517525,7.11435836888911,0.899899717281399,5.93319817540185,1.4209602298922,153.395256585423,250.510335069654,49.0451866219099,60.4826603725974,51.1089656083858,205.668708770739,203.640794757388,70.9221727454584,74.6636219232061,107.548598033372,225.737556048747,275.932337602091,270.040285464476,204.4237459818,189.928348118602,199.509820923239,171.976727384851,124.933299427033,177.093169173323,284.021956396616,241.17762727368,187.331443054427,1.36307147999731,6.95258352982427,3.47837386442013,5.16254326188832,0,2.15881276655127,0.649776417447669,0.448026887097336,14.8871085339657,0.852151612890289,0.519572009205738,0.35333957451034,21.2673563862788,0,0,0,0,0,0,12.7885945285347,9.32176381129818,20.7818994690755,10.0621489524359,19.1813251336649,12.9144678463393,10.5505848386836,13.5227013206061,8.92232798440696,0.247194967734374,13.5923395504717,0,1.61766849947409,0.883366073841574,2.42437626567611,0,963.24882216799,980.001141180156,1.02182822083437,0,0,0,245.656648623909,273.12785988272,127.539167394557,561.452554221053,384.851763282147,266.799849214475,225.515355664183,6.00852246716866,2.11491850037158,0.758168275301024,35.3542317889276,7.1566243629487,13.3343220571414,25.9289466919703,24.2634756715501,37.0118555383224,45.0960295402671,45.7264415851477,118.486143798469,0.215567992932842,1.51284864134255,2.28736461413134,4.3839146485515,7.78532297831674,6.96504333044333,3.90986059175093,9.95171334092466,0,0,0,0.828503090142008,2.57978665979206,0.900310307305074,2.3674473558521,0.590292695242212,2.1597395804233,0.93013577900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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18190 | |||
|HGNC= | |||
|MCL_coexpression_id=39 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-4bp_to_ENSMUST00000148391_5end | |||
|cluster_id=chr19:6497587..6497666,+ | |||
|description=CAGE_peak_1_at_Nrxn2_5end | |||
|id=chr19:6497587..6497666,+ | |||
|ontology_enrichment_celltype=CL:0000117!9.56e-13!23;CL:0000337!9.56e-13!23;CL:0000221!1.87e-12!44;CL:0000133!1.87e-12!44;CL:0002319!2.65e-12!43;CL:0000540!2.60e-10!33;CL:0000047!2.60e-10!33;CL:0000031!2.60e-10!33;CL:0000404!2.60e-10!33;CL:0000055!1.68e-09!50;CL:0000393!1.32e-07!39;CL:0000211!1.32e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.69e-13,23;CL:0000337,5.69e-13,23;CL:0000221,1.13e-12,44;CL:0000133,1.13e-12,44;CL:0002319,1.61e-12,43;CL:0000540,1.73e-10,33;CL:0000047,1.73e-10,33;CL:0000031,1.73e-10,33;CL:0000404,1.73e-10,33;CL:0000393,8.13e-08,39;CL:0000211,8.13e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.32e-31!73;UBERON:0005743!1.32e-31!73;UBERON:0004121!1.68e-31!102;UBERON:0000924!1.68e-31!102;UBERON:0006601!1.68e-31!102;UBERON:0000073!1.06e-30!75;UBERON:0001016!1.06e-30!75;UBERON:0002346!7.56e-30!71;UBERON:0003075!7.56e-30!71;UBERON:0007284!7.56e-30!71;UBERON:0000033!1.37e-28!63;UBERON:0001049!7.29e-28!52;UBERON:0005068!7.29e-28!52;UBERON:0006241!7.29e-28!52;UBERON:0007135!7.29e-28!52;UBERON:0000955!8.16e-27!50;UBERON:0006238!8.16e-27!50;UBERON:0002616!4.17e-26!49;UBERON:0003056!5.45e-23!49;UBERON:0003080!9.92e-21!40;UBERON:0002780!4.10e-20!39;UBERON:0001890!4.10e-20!39;UBERON:0006240!4.10e-20!39;UBERON:0002020!1.48e-19!34;UBERON:0002791!1.17e-16!29;UBERON:0003528!1.17e-16!29;UBERON:0001893!1.17e-16!29;UBERON:0000956!1.58e-12!21;UBERON:0001869!1.58e-12!21;UBERON:0000203!1.58e-12!21;UBERON:0007811!2.82e-12!86;UBERON:0000153!3.59e-11!94;UBERON:0002619!1.06e-10!17;UBERON:0002021!4.99e-08!10;UBERON:0000411!4.99e-08!10;UBERON:0001950!4.99e-08!10;UBERON:0003076!1.39e-07!12;UBERON:0003057!1.39e-07!12;UBERON:0000468!6.19e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.24e-32,73;UBERON:0001016,2.73e-31,75;UBERON:0004121,5.55e-31,95;UBERON:0000924,5.55e-31,95;UBERON:0006601,5.55e-31,95;UBERON:0002346,6.01e-30,64;UBERON:0003075,6.01e-30,64;UBERON:0007284,6.01e-30,64;UBERON:0000073,7.41e-30,54;UBERON:0010371,8.81e-29,73;UBERON:0001049,2.14e-28,52;UBERON:0005068,2.14e-28,52;UBERON:0006241,2.14e-28,52;UBERON:0007135,2.14e-28,52;UBERON:0000955,2.68e-25,47;UBERON:0006238,2.68e-25,47;UBERON:0002616,1.38e-24,46;UBERON:0003056,2.01e-23,49;UBERON:0010314,2.54e-22,92;UBERON:0003080,4.07e-21,40;UBERON:0002780,1.73e-20,39;UBERON:0001890,1.73e-20,39;UBERON:0006240,1.73e-20,39;UBERON:0002020,6.42e-20,34;UBERON:0003528,5.82e-17,29;UBERON:0002791,5.82e-17,29;UBERON:0001893,5.82e-17,29;UBERON:0000956,9.49e-13,21;UBERON:0001869,9.49e-13,21;UBERON:0000203,9.49e-13,21;UBERON:0002619,6.93e-11,17;UBERON:0002021,3.69e-08,10;UBERON:0000411,3.69e-08,10;UBERON:0001950,3.69e-08,10;UBERON:0003076,1.05e-07,12;UBERON:0003057,1.05e-07,12 | |||
|phase1_expression=73.6684696682052,0.348975407639361,0,0,0,0,0,0,0.140788722151667,0,0.171217968225505,0,0,0,0.333109761815663,0,0,0,0,0,67.3542857996473,14.3971879241284,22.4631818659484,0,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,1.6366586336825,1.31790010585369,0,54.7673941043627,35.1020501772519,26.1426557454021,35.3862416315196,22.2578410384326,24.4379359420452,0,0,0,3.34437266846731,4.58453503902011,1.03134418455488,178.645434939025,232.756030879694,250.363404384941,5.76035704517525,7.11435836888911,0.899899717281399,5.93319817540185,1.4209602298922,153.395256585423,250.510335069654,49.0451866219099,60.4826603725974,51.1089656083858,205.668708770739,203.640794757388,70.9221727454584,74.6636219232061,107.548598033372,225.737556048747,275.932337602091,270.040285464476,204.4237459818,189.928348118602,199.509820923239,171.976727384851,124.933299427033,177.093169173323,284.021956396616,241.17762727368,187.331443054427,1.36307147999731,6.95258352982427,3.47837386442013,5.16254326188832,0,2.15881276655127,0.649776417447669,0.448026887097336,14.8871085339657,0.852151612890289,0.519572009205738,0.35333957451034,21.2673563862788,0,0,0,0,0,0,12.7885945285347,9.32176381129818,20.7818994690755,10.0621489524359,19.1813251336649,12.9144678463393,10.5505848386836,13.5227013206061,8.92232798440696,0.247194967734374,13.5923395504717,0,1.61766849947409,0.883366073841574,2.42437626567611,0,963.24882216799,980.001141180156,1.02182822083437,0,0,0,245.656648623909,273.12785988272,127.539167394557,561.452554221053,384.851763282147,266.799849214475,225.515355664183,6.00852246716866,2.11491850037158,0.758168275301024,35.3542317889276,7.1566243629487,13.3343220571414,25.9289466919703,24.2634756715501,37.0118555383224,45.0960295402671,45.7264415851477,118.486143798469,0.215567992932842,1.51284864134255,2.28736461413134,4.3839146485515,7.78532297831674,6.96504333044333,3.90986059175093,9.95171334092466,0,0,0,0.828503090142008,2.57978665979206,0.900310307305074,2.3674473558521,0.590292695242212,2.1597395804233,0.930135779001631,0,1.75148013550754,2.63295759861569,3.77585167381919,7.53939928776458,6.87139940899062,9.87975518809728,7.78397228810156,398.289162580457,140.567700510103,0,1.58670339998127,10.4511242762265,6.96710015581316,8.11865006329188,8.87407508342707,5.55945109612176,8.3699275489526,0.474529061544512,3.95277491337626,4.02136334080431,5.76973768919337,4.09424582950152,2.69645822596266,1.72910439899755,4.38110801159608,8.72472344384176,9.71112357182695,10.1436962105772,9.16430975303914,4.65485969202302,3.08597607517402,4.17361145020098,6.4948465111025,6.75094529717912,7.52722699922983,3.26097889795864,1.33476084572875,1.37591296579242,0,0.811440485554012,0.241177159752417,0,0.287696137450811,0,0.823684239564244,8.62609239164127,2.60498663367952,3.43241440426017,1.76805214562978,2.69096120282868,3.37710464954357,2.77129785249907,1.51593129416388,2.11854469374634,1.52770577197669,0.704070744865506,0.837531287209079,0.952174563544055,0.390267295715598,1.26108115284953,1.55025282754142,1.43509291791738,1.47476983244164,2.07221978239075,1.73578870297814,0,0,0,0,176.284547806596,138.3097901788,8.0328123234571,4.03953483526997,4.73262329124385,7.80877488593277,4.52389135238878,1.43381278771531,2.89638276307112,3.67999490025482,5.26253912177363,13.7360253218317,7.90575555893047,392.97596998387,5.53566332312248,16.738166744722,7.98146100832523,23.095817216155,5.30980553359851,9.71122544619926,9.06970670894253,4.71512699389745,6.79194353625777,9.22305443831782,4.9101375701962,5.08947221268508,2.85197902707777,7.9009189483954,5.27093042874994,12.3762651897824,52.7681388918371,17.8260483090997,31.5635188429921,25.0774330986963,28.9064580836906,32.6414936211789,36.5298825736709,50.5411815530235,0.469343416127421,1.48282449604674,4.19003956304428,16.9832840529724,7.91175690809937,12.5450883850564,16.592755816436,14.9368218768006,2.91480836629851,195.438268319077,1.36696704638282,2.88941615148511,1.66675074632741,0.376736914009382,0.956859594047176,0.686334519619568,0,0.139951452323658,0.138199973804424,0.954670618015114,5.21954389408873,7.31950081656655,4.96824567780286,4.80903080833278,4.80397640241591,5.12484516262319,6.86023682520288,2.09404753587224,4.66613903850454,0.621339313086926,0,7.47582730219894,6.783798108741,8.16694991045,6.45799117388655,9.46154302748358,7.3935060346825,3.25510962109875,2.83120229949419,1.44950472495604,1.44015003128933,1.58005560314089,2.22997736819181,2.05421914329655,0.649604114888975,1.25318686967237,0.596044064343795,0.360586348559907,0.147689527174577,0.504832249740738,0.609654453239999,0.403304740547362,0.974578807397524,0.769694733122636,0.701261413089414,4.98806843953465,0.221985953374065,0.179427713218951,0,8.88672132548076,6.75656911624255,14.2858266928467,1.07184189539533,2.50786052017682,528.042972846957,469.071416000813,493.26303707132,590.315681350567,429.546739896193,538.595848838856,461.715390158555,503.459105204678,438.188709487726,465.984280576638,14.426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| |||
|short_description=p1@Nrxn2 | |||
}} |
Revision as of 12:31, 4 August 2015
Short description: | p1@Nrxn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nrxn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | -4bp_to_ENSMUST00000148391_5end |
EntrezGene: | 18190 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.69e-13 | 23 |
neuroblast (sensu Vertebrata) | 5.69e-13 | 23 |
ectodermal cell | 1.13e-12 | 44 |
neurectodermal cell | 1.13e-12 | 44 |
neural cell | 1.61e-12 | 43 |
neuron | 1.73e-10 | 33 |
neuronal stem cell | 1.73e-10 | 33 |
neuroblast | 1.73e-10 | 33 |
electrically signaling cell | 1.73e-10 | 33 |
electrically responsive cell | 8.13e-08 | 39 |
electrically active cell | 8.13e-08 | 39 |